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Open AccessJournal ArticleDOI

Laboratory Diagnosis of COVID-19: Current Issues and Challenges.

TLDR
In the preanalytical stage, collecting the proper respiratory tract specimen at the right time from the right anatomic site is essential for a prompt and accurate molecular diagnosis of COVID-19, and real-time reverse transcription-PCR assays remain the molecular test of choice for the etiologic diagnosis of SARS-CoV-2 infection while antibody-based techniques are being introduced as supplemental tools.
Abstract
The COVID-19 outbreak has had a major impact on clinical microbiology laboratories in the past several months. This commentary covers current issues and challenges for the laboratory diagnosis of infections caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In the preanalytical stage, collecting the proper respiratory tract specimen at the right time from the right anatomic site is essential for a prompt and accurate molecular diagnosis of COVID-19. Appropriate measures are required to keep laboratory staff safe while producing reliable test results. In the analytic stage, real-time reverse transcription-PCR (RT-PCR) assays remain the molecular test of choice for the etiologic diagnosis of SARS-CoV-2 infection while antibody-based techniques are being introduced as supplemental tools. In the postanalytical stage, testing results should be carefully interpreted using both molecular and serological findings. Finally, random-access, integrated devices available at the point of care with scalable capacities will facilitate the rapid and accurate diagnosis and monitoring of SARS-CoV-2 infections and greatly assist in the control of this outbreak.

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Citations
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Journal ArticleDOI

Biosensor and molecular-based methods for the detection of human coronaviruses: A review.

TL;DR: A short overview of recent advancements in molecular and biosensor-based diagnosis of viruses, including the human coronaviruses, is provided and the challenges and future perspectives of these detection technologies are highlighted.
Journal ArticleDOI

The diagnostic methods in the COVID-19 pandemic, today and in the future.

TL;DR: The knowledge about the causative pathogen of CO VID-19 and various diagnostic methods in this pandemic is summarized for better understanding of the limitations and the nuances of virus testing for COVID-19.
Journal ArticleDOI

Anosmia and olfactory tract neuropathy in a case of COVID-19.

TL;DR: A previously healthy man of COVID-19 presenting with anosmia as the obvious symptom with relevant radiological findings on brain magnetic resonance imaging is reported.
Posted Content

End-to-End AI-Based Point-of-Care Diagnosis System for Classifying Respiratory Illnesses and Early Detection of COVID-19

TL;DR: This concept paper discusses a medical hypothesis of an end-to-end portable system that can record data from patients with symptoms, including coughs and translate them into health data for diagnosis, and with the aid of machine learning, classify them into different respiratory illnesses, including COVID-19.
Journal ArticleDOI

Complex features extraction with deep learning model for the detection of COVID19 from CT scan images using ensemble based machine learning approach

TL;DR: In this paper , Contrast Limited Histogram Equalization (CLAHE) was applied to CT images as a preprocessing step for enhancing the quality of the images and a novel Convolutional Neural Network (CNN) model was developed to extract 100 prominent features from a total of 2482 CT scan images.
References
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Journal ArticleDOI

A pneumonia outbreak associated with a new coronavirus of probable bat origin

TL;DR: Identification and characterization of a new coronavirus (2019-nCoV), which caused an epidemic of acute respiratory syndrome in humans in Wuhan, China, and it is shown that this virus belongs to the species of SARSr-CoV, indicates that the virus is related to a bat coronav virus.
Journal ArticleDOI

A new coronavirus associated with human respiratory disease in China.

TL;DR: Phylogenetic and metagenomic analyses of the complete viral genome of a new coronavirus from the family Coronaviridae reveal that the virus is closely related to a group of SARS-like coronaviruses found in bats in China.
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