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Open AccessJournal ArticleDOI

Laboratory Diagnosis of COVID-19: Current Issues and Challenges.

TLDR
In the preanalytical stage, collecting the proper respiratory tract specimen at the right time from the right anatomic site is essential for a prompt and accurate molecular diagnosis of COVID-19, and real-time reverse transcription-PCR assays remain the molecular test of choice for the etiologic diagnosis of SARS-CoV-2 infection while antibody-based techniques are being introduced as supplemental tools.
Abstract
The COVID-19 outbreak has had a major impact on clinical microbiology laboratories in the past several months. This commentary covers current issues and challenges for the laboratory diagnosis of infections caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In the preanalytical stage, collecting the proper respiratory tract specimen at the right time from the right anatomic site is essential for a prompt and accurate molecular diagnosis of COVID-19. Appropriate measures are required to keep laboratory staff safe while producing reliable test results. In the analytic stage, real-time reverse transcription-PCR (RT-PCR) assays remain the molecular test of choice for the etiologic diagnosis of SARS-CoV-2 infection while antibody-based techniques are being introduced as supplemental tools. In the postanalytical stage, testing results should be carefully interpreted using both molecular and serological findings. Finally, random-access, integrated devices available at the point of care with scalable capacities will facilitate the rapid and accurate diagnosis and monitoring of SARS-CoV-2 infections and greatly assist in the control of this outbreak.

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Journal ArticleDOI

COVID-19 pandemic and Farr's law: A global comparison and prediction of outbreak acceleration and deceleration rates.

TL;DR: Farr’s law seems to be a useful model to give an overview of COVID-19 pandemic dynamics, and a call to urgently prioritize actions in those countries to intensify surveillance, to re-allocate resources, and to build healthcare capacities based on multi-nation collaboration to reduce the future impact on these regions in an eventual second wave.
Journal ArticleDOI

SARS-CoV-2 early infection signature identified potential key infection mechanisms and drug targets.

TL;DR: In this paper, a gene signature consisting of 25 genes was generated using a publicly available RNA-Sequencing(RNA-Seq) dataset of cultured cells infected with SARS-CoV-2.
Journal ArticleDOI

Willingness and readiness to test for COVID-19; A qualitative exploration of community pharmacists.

TL;DR: The present study aimed to exploring community pharmacists’ willingness and readiness to test for COVID‐19 in Jordan to find out if they are willing and ready to take part in clinical trials.
Journal ArticleDOI

Microfluidic-based virus detection methods for respiratory diseases.

TL;DR: A review of the methods and technologies developed for microfluidic-based direct detection of viruses that cause respiratory infection using different detection techniques can be found in this article, where the authors discuss the use of minimal sample volumes and thereby leading to a time, cost, and labor effective operation.
Posted ContentDOI

Detection of SARS-CoV-2 antibodies using commercial assays and seroconversion patterns in hospitalized patients

TL;DR: The performance of six CE-marked point-of-care tests and three ELISA assays for the diagnosis of COVID-19 is evaluated by exploring seroconversions in hospitalized patients who tested positive for SARS-CoV-2 RNA by evaluating the performance of the ELISA and POC tests.
References
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Journal ArticleDOI

A pneumonia outbreak associated with a new coronavirus of probable bat origin

TL;DR: Identification and characterization of a new coronavirus (2019-nCoV), which caused an epidemic of acute respiratory syndrome in humans in Wuhan, China, and it is shown that this virus belongs to the species of SARSr-CoV, indicates that the virus is related to a bat coronav virus.
Journal ArticleDOI

A new coronavirus associated with human respiratory disease in China.

TL;DR: Phylogenetic and metagenomic analyses of the complete viral genome of a new coronavirus from the family Coronaviridae reveal that the virus is closely related to a group of SARS-like coronaviruses found in bats in China.
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