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Open AccessJournal ArticleDOI

Laboratory Diagnosis of COVID-19: Current Issues and Challenges.

TLDR
In the preanalytical stage, collecting the proper respiratory tract specimen at the right time from the right anatomic site is essential for a prompt and accurate molecular diagnosis of COVID-19, and real-time reverse transcription-PCR assays remain the molecular test of choice for the etiologic diagnosis of SARS-CoV-2 infection while antibody-based techniques are being introduced as supplemental tools.
Abstract
The COVID-19 outbreak has had a major impact on clinical microbiology laboratories in the past several months. This commentary covers current issues and challenges for the laboratory diagnosis of infections caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). In the preanalytical stage, collecting the proper respiratory tract specimen at the right time from the right anatomic site is essential for a prompt and accurate molecular diagnosis of COVID-19. Appropriate measures are required to keep laboratory staff safe while producing reliable test results. In the analytic stage, real-time reverse transcription-PCR (RT-PCR) assays remain the molecular test of choice for the etiologic diagnosis of SARS-CoV-2 infection while antibody-based techniques are being introduced as supplemental tools. In the postanalytical stage, testing results should be carefully interpreted using both molecular and serological findings. Finally, random-access, integrated devices available at the point of care with scalable capacities will facilitate the rapid and accurate diagnosis and monitoring of SARS-CoV-2 infections and greatly assist in the control of this outbreak.

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Citations
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Sensitivity evaluation of 2019 novel coronavirus (SARS-CoV-2) RT-PCR detection kits and strategy to reduce false negative

TL;DR: In this article, the authors evaluated the sensitivity of different nucleic acid detection kits and made recommendations for the selection of validation kit, and amplify the suspicious result to be reportable positive by means of simple continuous amplification, which is of great significance for the prevention and control of the current epidemic and discharge criteria of low viral load patients.
Posted ContentDOI

A serological assay to detect SARS-CoV-2 antibodies in at-home collected finger-prick dried blood spots

TL;DR: The development and validation of a at-home finger-prick dried blood spot collection kit and an analysis method that demonstrated 100% sensitivity and specificity using at- home collected specimens across the US.
Journal ArticleDOI

COVID-19 in-vitro Diagnostics: State-of-the-Art and Challenges for Rapid, Scalable, and High-Accuracy Screening

TL;DR: A review of commercialized and FDA approved molecular-based and serology-based diagnostic assays, analyzed their performance characteristics and shed the light on their utility and limitations in dealing with the COVID-19 global public health crisis as discussed by the authors.
Journal Article

Laboratory Tests for COVID-19: A Review of Peer-Reviewed Publications and Implications for Clinical Use

TL;DR: A narrative review of peer-reviewed research studies on RT-PCR, serology and antigen immune-assays for COVID-19, briefly describe their lab methods and discuss their limitations for clinical practice is provided.
Posted ContentDOI

On the Role of Artificial Intelligence in Medical Imaging of COVID-19

TL;DR: This work identifies key use cases of lung imaging for COVID-19, comparing CT, X-Ray and ultrasound imaging from clinical and AI perspectives and reveals a disparity in the focus of the AI and clinical communities, caused by data availability and the lack of collaboration, and in modality trends, driven by ubiquity.
References
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Journal ArticleDOI

A pneumonia outbreak associated with a new coronavirus of probable bat origin

TL;DR: Identification and characterization of a new coronavirus (2019-nCoV), which caused an epidemic of acute respiratory syndrome in humans in Wuhan, China, and it is shown that this virus belongs to the species of SARSr-CoV, indicates that the virus is related to a bat coronav virus.
Journal ArticleDOI

A new coronavirus associated with human respiratory disease in China.

TL;DR: Phylogenetic and metagenomic analyses of the complete viral genome of a new coronavirus from the family Coronaviridae reveal that the virus is closely related to a group of SARS-like coronaviruses found in bats in China.
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