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Open AccessJournal ArticleDOI

New insights into the classification and nomenclature of cortical GABAergic interneurons

Javier DeFelipe, +43 more
- 01 Mar 2013 - 
- Vol. 14, Iss: 3, pp 202-216
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TLDR
A possible taxonomical solution for classifying GABAergic interneurons of the cerebral cortex based on a novel, web-based interactive system that allows experts to classify neurons with pre-determined criteria is described.
Abstract
A systematic classification and accepted nomenclature of neuron types is much needed but is currently lacking. This article describes a possible taxonomical solution for classifying GABAergic interneurons of the cerebral cortex based on a novel, web-based interactive system that allows experts to classify neurons with pre-determined criteria. Using Bayesian analysis and clustering algorithms on the resulting data, we investigated the suitability of several anatomical terms and neuron names for cortical GABAergic interneurons. Moreover, we show that supervised classification models could automatically categorize interneurons in agreement with experts' assignments. These results demonstrate a practical and objective approach to the naming, characterization and classification of neurons based on community consensus.

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Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq

TL;DR: Large-scale single-cell RNA sequencing is used to classify cells in the mouse somatosensory cortex and hippocampal CA1 region and found 47 molecularly distinct subclasses, comprising all known major cell types in the cortex.
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Adult mouse cortical cell taxonomy revealed by single cell transcriptomics

TL;DR: This work constructed a cellular taxonomy of one cortical region, primary visual cortex, in adult mice on the basis of single-cell RNA sequencing and identified 49 transcriptomic cell types, including 23 GABAergic, 19 glutamatergic and 7 non-neuronal types.
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GABAergic Interneurons in the Neocortex: From Cellular Properties to Circuits

TL;DR: Current understanding of neocortical interneuron diversity and the properties that distinguish cell types are reviewed and it is illustrated how recent advances in the field have shed light onto the mechanisms by which GABAergic inhibition contributes to network operations.
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Reconstruction and Simulation of Neocortical Microcircuitry

Henry Markram, +92 more
- 08 Oct 2015 - 
TL;DR: A first-draft digital reconstruction of the microcircuitry of somatosensory cortex of juvenile rat is presented, finding a spectrum of network states with a sharp transition from synchronous to asynchronous activity, modulated by physiological mechanisms.
Journal ArticleDOI

Inhibition of Inhibition in Visual Cortex: The Logic of Connections Between Molecularly Distinct Interneurons

TL;DR: This work describes a simple and complementary interaction scheme between three large, molecularly distinct interneuron populations in mouse visual cortex: parvalbumin-expressing interneurons strongly inhibit one another but provide little inhibition to other populations, while somatostatin-expresses avoid inhibiting one another yet strongly inhibit all other populations.
References
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Journal ArticleDOI

Statistical pattern recognition: a review

TL;DR: The objective of this review paper is to summarize and compare some of the well-known methods used in various stages of a pattern recognition system and identify research topics and applications which are at the forefront of this exciting and challenging field.
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Statistical Pattern Recognition

TL;DR: In this paper, the primary goal of pattern recognition is supervised or unsupervised classification, and the various frameworks in which pattern recognition has been traditionally formulated, the statistical approach has been used.
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