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Open AccessJournal ArticleDOI

Species-specific responses of Late Quaternary megafauna to climate and humans

Eline D. Lorenzen, +58 more
- 17 Nov 2011 - 
- Vol. 479, Iss: 7373, pp 359-364
TLDR
It is shown that climate has been a major driver of population change over the past 50,000 years, however, each species responds differently to the effects of climatic shifts, habitat redistribution and human encroachment.
Abstract
Despite decades of research, the roles of climate and humans in driving the dramatic extinctions of large-bodied mammals during the Late Quaternary period remain contentious. Here we use ancient DNA, species distribution models and the human fossil record to elucidate how climate and humans shaped the demographic history of woolly rhinoceros, woolly mammoth, wild horse, reindeer, bison and musk ox. We show that climate has been a major driver of population change over the past 50,000 years. However, each species responds differently to the effects of climatic shifts, habitat redistribution and human encroachment. Although climate change alone can explain the extinction of some species, such as Eurasian musk ox and woolly rhinoceros, a combination of climatic and anthropogenic effects appears to be responsible for the extinction of others, including Eurasian steppe bison and wild horse. We find no genetic signature or any distinctive range dynamics distinguishing extinct from surviving species, emphasizing the challenges associated with predicting future responses of extant mammals to climate and human-mediated habitat change.

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Citations
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Defining the Anthropocene

TL;DR: The authors reviewed the historical genesis of the Anthropocene Epoch idea and assessed anthropogenic signatures in the geological record against the formal requirements for the recognition of a new epoch, finding that of the various proposed dates two do appear to conform to the criteria to mark the beginning of the anthropocene: 1610 and 1964.
Journal ArticleDOI

Environmental DNA - An emerging tool in conservation for monitoring past and present biodiversity

TL;DR: The achievements gained through analyses of eDNA from macro-organisms in a conservation context are reviewed, its potential advantages and limitations are discussed, and it is expected the eDNA-based approaches to move from single-marker analyses of species or communities to meta-genomic surveys of entire ecosystems to predict spatial and temporal biodiversity patterns.

Defining the Anthropocene

TL;DR: The evidence suggests that of the various proposed dates two do appear to conform to the criteria to mark the beginning of the Anthropocene: 1610 and 1964.
Journal ArticleDOI

Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse.

Ludovic Orlando, +58 more
- 04 Jul 2013 - 
TL;DR: Thealyses suggest that the Equus lineage giving rise to all contemporary horses, zebras and donkeys originated 4.0–4.5 million years before present, twice the conventionally accepted time to the most recent common ancestor of the genus Equus, and supports the contention that Przewalski's horses represent the last surviving wild horse population.
Book

Habitat Suitability and Distribution Models

TL;DR: In this article, the authors introduce the key stages of niche-based habitat suitability model building, evaluation and prediction required for understanding and predicting future patterns of species and biodiversity, including the main theory behind ecological niches and species distributions.
References
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Journal ArticleDOI

BEAST: Bayesian evolutionary analysis by sampling trees

TL;DR: BEAST is a fast, flexible software architecture for Bayesian analysis of molecular sequences related by an evolutionary tree that provides models for DNA and protein sequence evolution, highly parametric coalescent analysis, relaxed clock phylogenetics, non-contemporaneous sequence data, statistical alignment and a wide range of options for prior distributions.
Journal ArticleDOI

Bayesian Coalescent Inference of Past Population Dynamics from Molecular Sequences

TL;DR: The Bayesian skyline plot is introduced, a new method for estimating past population dynamics through time from a sample of molecular sequences without dependence on a prespecified parametric model of demographic history, and a Markov chain Monte Carlo sampling procedure is described that efficiently samples a variant of the generalized skyline plot, given sequence data.
Journal ArticleDOI

Assessing the Causes of Late Pleistocene Extinctions on the Continents

TL;DR: Evidence now supports the idea that humans contributed to extinction on some continents, but human hunting was not solely responsible for the pattern of extinction everywhere, and suggests that the intersection of human impacts with pronounced climatic change drove the precise timing and geography of extinction in the Northern Hemisphere.
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