Showing papers on "Growing season published in 2019"

Microclimatic buffering in forests of the future: the role of local water balance

Abstract: Forest canopies buffer climate extremes and promote microclimates that may function as refugia for understory species under changing climate. However, the biophysical conditions that promote and maintain microclimatic buffering and its stability through time are largely unresolved. We posited that forest microclimatic buffering is sensitive to local water balance and canopy cover, and we measured this effect during the growing season across a climate gradient in forests of the northwestern United States (US). We found that forest canopies buffer extremes of maximum temperature and vapor pressure deficit (VPD), with biologically meaningful effect sizes. For example, during the growing season, maximum temperature and VPD under at least 50% forest canopy were 5.3°C and 1.1 kPa lower on average, respectively, compared to areas without canopy cover. Canopy buffering of temperature and vapor pressure deficit was greater at higher levels of canopy cover, and varied with water balance, implying that buffering effects are subject to changes in local hydrology. We project changes in the water balance for the mid‐21st century and predict how such changes may impact the ability of western US forests to buffer climate extremes. Our results suggest that some forests will lose their capacity to buffer climate extremes as sites become increasingly water limited. Changes in water balance combined with accelerating canopy losses due to increases in the frequency and severity of disturbance will create potentially non‐linear changes in the microclimate conditions of western US forests.

Large loss of CO2 in winter observed across the northern permafrost region

Abstract: Recent warming in the Arctic, which has been amplified during the winter1–3, greatly enhances microbial decomposition of soil organic matter and subsequent release of carbon dioxide (CO2)4. However, the amount of CO2 released in winter is not known and has not been well represented by ecosystem models or empirically based estimates5,6. Here we synthesize regional in situ observations of CO2 flux from Arctic and boreal soils to assess current and future winter carbon losses from the northern permafrost domain. We estimate a contemporary loss of 1,662 TgC per year from the permafrost region during the winter season (October–April). This loss is greater than the average growing season carbon uptake for this region estimated from process models (−1,032 TgC per year). Extending model predictions to warmer conditions up to 2100 indicates that winter CO2 emissions will increase 17% under a moderate mitigation scenario—Representative Concentration Pathway 4.5—and 41% under business-as-usual emissions scenario—Representative Concentration Pathway 8.5. Our results provide a baseline for winter CO2 emissions from northern terrestrial regions and indicate that enhanced soil CO2 loss due to winter warming may offset growing season carbon uptake under future climatic conditions. Winter warming in the Arctic will increase the CO2 flux from soils. A pan-Arctic analysis shows a current loss of 1,662 TgC per year over the winter, exceeding estimated carbon uptake in the growing season; projections suggest a 17% increase under RCP 4.5 and a 41% increase under RCP 8.5 by 2100.

Seasonal origins of soil water used by trees

Abstract: . Rain recharges soil water storages and either percolates downward into aquifers and streams or is returned to the atmosphere through evapotranspiration. Although it is commonly assumed that summer rainfall recharges plant-available water during the growing season, the seasonal origins of water used by plants have not been systematically explored. We characterize the seasonal origins of waters in soils and trees by comparing their midsummer isotopic signatures ( δ2H ) to seasonal isotopic cycles in precipitation, using a new seasonal origin index. Across 182 Swiss forest sites, xylem water isotopic signatures show that summer rain was not the predominant water source for midsummer transpiration in any of the three sampled tree species. Beech and oak mostly used winter precipitation, whereas spruce used water of more diverse seasonal origins. Even in the same plots, beech consistently used more winter precipitation than spruce, demonstrating consistent niche partitioning in the rhizosphere. All three species' xylem water isotopes indicate that trees used more winter precipitation in drier regions, potentially mitigating their vulnerability to summer droughts. The widespread occurrence of winter isotopic signatures in midsummer xylem implies that growing-season rainfall may have minimally recharged the soil water storages that supply tree growth, even across diverse humid climates (690–2068 mm annual precipitation). These results challenge common assumptions concerning how water flows through soils and is accessed by trees. Beyond these ecological and hydrological implications, our findings also imply that stable isotopes of δ18O and δ2H in plant tissues, which are often used in climate reconstructions, may not reflect water from growing-season climates.

Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops.

Abstract: Perennial grasses are promising feedstocks for biofuel production, with potential for leveraging their native microbiomes to increase their productivity and resilience to environmental stress. Here, we characterize the 16S rRNA gene diversity and seasonal assembly of bacterial and archaeal microbiomes of two perennial cellulosic feedstocks, switchgrass (Panicum virgatum L.) and miscanthus (Miscanthus x giganteus). We sample leaves and soil every three weeks from pre-emergence through senescence for two consecutive switchgrass growing seasons and one miscanthus season, and identify core leaf taxa based on occupancy. Virtually all leaf taxa are also detected in soil; source-sink modeling shows non-random, ecological filtering by the leaf, suggesting that soil is an important reservoir of phyllosphere diversity. Core leaf taxa include early, mid, and late season groups that were consistent across years and crops. This consistency in leaf microbiome dynamics and core members is promising for microbiome manipulation or management to support crop production.

Whole-tree nonstructural carbohydrate storage and seasonal dynamics in five temperate species

Abstract: Despite the importance of nonstructural carbohydrates (NSC) for growth and survival in woody plants, we know little about whole-tree NSC storage. The conventional theory suggests that NSC reserves will increase over the growing season and decrease over the dormant season. Here, we compare storage in five temperate tree species to determine the size and seasonal fluctuation of whole-tree total NSC pools as well as the contribution of individual organs. NSC concentrations in the branches, stemwood, and roots of 24 trees were measured across 12 months. We then scaled up concentrations to the whole-tree and ecosystem levels using allometric equations and forest stand inventory data. While whole-tree total NSC pools followed the conventional theory, sugar pools peaked in the dormant season and starch pools in the growing season. Seasonal depletion of total NSCs was minimal at the whole-tree level, but substantial at the organ level, particularly in branches. Surprisingly, roots were not the major storage organ as branches stored comparable amounts of starch throughout the year, and root reserves were not used to support springtime growth. Scaling up NSC concentrations to the ecosystem level, we find that commonly used, process-based ecosystem and land surface models all overpredict NSC storage.

The Exceptional 2018 European Water Seesaw Calls for Action on Adaptation

Abstract: Temperature and precipitation are the most important factors responsible for agricultural productivity variations. In 2018 spring/summer growing season, Europe experienced concurrent anomalies of b ...

Unexplained hydrogen isotope offsets complicate the identification and quantification of tree water sources in a riparian forest

Abstract: . We investigated plant water sources of an emblematic refugial population of Fagus sylvatica (L.) in the Ciron river gorges in south-western France using stable water isotopes. It is generally assumed that no isotopic fractionation occurs during root water uptake, so that the isotopic composition of xylem water effectively reflects that of source water. However, this assumption has been called into question by recent studies that found that, at least at some dates during the growing season, plant water did not reflect any mixture of the potential water sources. In this context, highly resolved datasets covering a range of environmental conditions could shed light on possible plant–soil fractionation processes responsible for this phenomenon. In this study, the hydrogen ( δ2H ) and oxygen ( δ18O ) isotope compositions of all potential tree water sources and xylem water were measured fortnightly over an entire growing season. Using a Bayesian isotope mixing model (MixSIAR), we then quantified the relative contribution of water sources for F. sylvatica and Quercus robur (L.) trees. Based on δ18O data alone, both species used a mix of top and deep soil water over the season, with Q. robur using deeper soil water than F. sylvatica. The contribution of stream water appeared to be marginal despite the proximity of the trees to the stream, as already reported for other riparian forests. Xylem water δ18O could always be interpreted as a mixture of deep and shallow soil waters, but the δ2H of xylem water was often more depleted than the considered water sources. We argue that an isotopic fractionation in the unsaturated zone and/or within the plant tissues could underlie this unexpected relatively depleted δ2H of xylem water, as already observed in halophytic and xerophytic species. By means of a sensitivity analysis, we found that the estimation of plant water sources using mixing models was strongly affected by this δ2H depletion. A better understanding of what causes this isotopic separation between xylem and source water is urgently needed.

Spatio-temporal microbial community dynamics within soil aggregates.

Abstract: Soil microbial communities are highly spatially organized, shaped in part by the structure of soil itself. Understanding how spatially discrete microbial communities change across years and seasons in response to environmental factors, plant phenology and aggregate turnover, is key to understanding how varying management practices impact the ecology of soil microbial communities. We investigated both seasonal (within year) and annual (across sampling years) changes of discrete microbial communities in soil aggregate fractions, large macroaggregates (LM) and microaggregates (MICRO) in three different bioenergy management systems. We hypothesized that 1) seasonal changes due to plant phenology and aggregate turnover will be most pronounced within the MICRO aggregate soil microbial community; 2) inter-annual variability will lead to changes in microbial diversity across aggregate sizes and the magnitude of change will be mediated by management regime. We found that LM and MICRO aggregates have unique microbial communities within soil. MICRO aggregate microbial communities are more diverse and change more dynamically across the sampling season, peaking in diversity at peak plant growth and maximum biomass. The number of families indicative of specific MICRO aggregate habitats increases over the growing season for both bacteria (from 3 to 51) and fungi (from 8 to 14). The LM aggregates harbored less diverse, yet more stable, communities within a growing season. By contrast, between years the LM aggregates were the most responsive to inter-annual variability. Our study demonstrates the importance of including the spatio-temporal dynamics of soil microbes. We identified “hot spots” of microbial diversity within soil, with a greater diversity of microbes found under prairies, within the MICRO aggregates, and seasonally during peak plant biomass. Targeted analysis of the MICRO aggregates can contribute to deeper understanding of potential diversity and functioning of soil microbial communities for ecosystem maintenance as well as the response to climatic events and environmental change.

Examination of the Climate Factors That Reduced Wheat Yield in Northwest India during the 2000s

Abstract: In India, a significant reduction of wheat yield would cause a widespread impact on food security for 1.35 billion people. The two highest wheat producing states, Punjab and Haryana in northern India, experienced a prolonged period of anomalously low wheat yield during 2002–2010. The extent of climate variability and change in influencing this prolonged reduction in wheat yield was examined. Daily air temperature (Tmax and Tave) was used to calculate the number of days above optimum temperature and growing degree days (GDD) anomaly. Two drought indices, the standard precipitation and evapotranspiration index and the radiation-based precipitation index, were used to describe the drought conditions. Groundwater variability was assessed via satellite-based approximation. The analysis results indicate that the wheat yield loss corresponds to the increase in the number of days with a temperature above 35 °C during the maturity stage (March). Reduction in monsoon rainfall led to a depletion of groundwater and reduced surface water for irrigation in the wheat growing season (November–March). Higher temperatures, coupled with water shortage and irregular irrigation, also appear to impact the yield reduction. In hindsight, improving the agronomic practices to minimize crop water usage could be an adaptation strategy to maintain the desired wheat yield in the face of climate-induced drought and precipitation anomaly.

Utility of the two-source energy balance (TSEB) model in vine and interrow flux partitioning over the growing season

Abstract: For monitoring water use in vineyards, it becomes important to evaluate the evapotranspiration (ET) contributions from the two distinct management zones: the vines and the interrow. Often the interrow is not completely bare soil but contains a cover crop that is senescent during the main growing season (nominally May–August), which in Central California is also the dry season. Drip irrigation systems running during the growing season supply water to the vine plant and re-wet some of the surrounding bare soil. However, most of the interrow cover crop is dry stubble by the end of May. This paper analyzes the utility of the thermal-based two-source energy balance (TSEB) model for estimating daytime ET using tower-based land surface temperature (LST) estimates over two Pinot Noir (Vitis vinifera) vineyards at different levels of maturity in the Central Valley of California near Lodi, CA. The data were collected as part of the Grape Remote sensing Atmospheric Profile and Evapotranspiration eXperiment (GRAPEX). Local eddy covariance (EC) flux tower measurements are used to evaluate the performance of the TSEB model output of the fluxes and the capability of partitioning the vine and cover crop transpiration (T) from the total ET or T/ET ratio. The results for the 2014–2016 growing seasons indicate that TSEB output of the energy balance components and ET, particularly, over the daytime period yield relative differences with flux tower measurements of less than 15%. However, the TSEB model in comparison with the correlation-based flux partitioning method overestimates T/ET during the winter and spring through bud break, but then underestimates during the growing season. A major factor that appears to affect this temporal behavior in T/ET is the daily LAI used as input to TSEB derived from a remote sensing product. An additional source of uncertainty is the use of local tower-based LST measurements, which are not representative of the flux tower measurement source area footprint.

Arctic browning: Impacts of extreme climatic events on heathland ecosystem CO2 fluxes.

Abstract: Extreme climatic events are among the drivers of recent declines in plant biomass and productivity observed across Arctic ecosystems, known as "Arctic browning." These events can cause landscape-scale vegetation damage and so are likely to have major impacts on ecosystem CO2 balance. However, there is little understanding of the impacts on CO2 fluxes, especially across the growing season. Furthermore, while widespread shoot mortality is commonly observed with browning events, recent observations show that shoot stress responses are also common, and manifest as high levels of persistent anthocyanin pigmentation. Whether or how this response impacts ecosystem CO2 fluxes is not known. To address these research needs, a growing season assessment of browning impacts following frost drought and extreme winter warming (both extreme climatic events) on the key ecosystem CO2 fluxes Net Ecosystem Exchange (NEE), Gross Primary Productivity (GPP), ecosystem respiration (Reco ) and soil respiration (Rsoil ) was carried out in widespread sub-Arctic dwarf shrub heathland, incorporating both mortality and stress responses. Browning (mortality and stress responses combined) caused considerable site-level reductions in GPP and NEE (of up to 44%), with greatest impacts occurring at early and late season. Furthermore, impacts on CO2 fluxes associated with stress often equalled or exceeded those resulting from vegetation mortality. This demonstrates that extreme events can have major impacts on ecosystem CO2 balance, considerably reducing the carbon sink capacity of the ecosystem, even where vegetation is not killed. Structural Equation Modelling and additional measurements, including decomposition rates and leaf respiration, provided further insight into mechanisms underlying impacts of mortality and stress on CO2 fluxes. The scale of reductions in ecosystem CO2 uptake highlights the need for a process-based understanding of Arctic browning in order to predict how vegetation and CO2 balance will respond to continuing climate change.

Growing season and radial growth predicted for Fagus sylvatica under climate change

Abstract: Climate scenarios for Slovenia suggest an increase in the mean annual temperature by 2 °C over the next six decades, associated with changes in the seasonal distribution of precipitation. European beech is an ecologically and economically important forest species in Europe, so it is important to understand the influence of changing conditions on its phenology and productivity for the upcoming years. We hypothesise that the ongoing warming and reduction in precipitation during the growing season will shorten the period of xylem development, thus limiting beech growth in the next decades. Xylem formation was monitored weekly from 2008 to 2016 at two sites in Slovenia. Onset and cessation of cell enlargement and secondary wall formation, as well as xylem growth, are used to evaluate climate-growth relationships by means of partial least squares regression and to predict xylem formation phenology and annual xylem increments under climate change scenarios. A positive correlation of spring phenological phases with March–May temperatures is found. In contrast, autumn phenological phases show a negative correlation with August and September temperatures, while high temperatures at the beginning of the year delay growth cessation. According to the selected climate change scenarios, phenological phases may advance by 2 days decade-1 in spring and delay by 1.5 days decade-1 in autumn. The duration of the growing season may increase by 20 days over the next six decades, resulting in 38 to 83% wider xylem increments. The growth of beech is expected to increase under a warming climate in the sites characterised by abundant water availability.

Snowmelt and early to mid-growing season water availability augment tree growth during rapid warming in southern Asian boreal forests

Abstract: Boreal forests are facing profound changes in their growth environment, including warming-induced water deficits, extended growing seasons, accelerated snowmelt, and permafrost thaw. The influence of warming on trees varies regionally, but in most boreal forests studied to date, tree growth has been found to be negatively affected by increasing temperatures. Here, we used a network of Pinus sylvestris tree-ring collections spanning a wide climate gradient the southern end of the boreal forest in Asia to assess their response to climate change for the period 1958-2014. Contrary to findings in other boreal regions, we found that previously negative effects of temperature on tree growth turned positive in the northern portion of the study network after the onset of rapid warming. Trees in the drier portion did not show this reversal in their climatic response during the period of rapid warming. Abundant water availability during the growing season, particularly in the early to mid-growing season (May-July), is key to the reversal of tree sensitivity to climate. Advancement in the onset of growth appears to allow trees to take advantage of snowmelt water, such that tree growth increases with increasing temperatures during the rapidly warming period. The region's monsoonal climate delivers limited precipitation during the early growing season, and thus snowmelt likely covers the water deficit so trees are less stressed from the onset of earlier growth. Our results indicate that the growth response of P. sylvestris to increasing temperatures strongly related to increased early season water availability. Hence, boreal forests with sufficient water available during crucial parts of the growing season might be more able to withstand or even increase growth during periods of rising temperatures. We suspect that other regions of the boreal forest may be affected by similar dynamics.

Isotopic evidence for episodic nitrogen fixation in switchgrass (Panicum virgatum L.)

Abstract: Perennial grasses can assimilate nitrogen (N) fixed by non-nodulating bacteria living in the rhizosphere and the plant's own tissues, but many details of associative N fixation (ANF) remain unknown, including ANF's contribution to grass N nutrition, the exact location of fixation, and composition of the associated microbial community. We examined ANF in switchgrass (Panicum virgatum L.), a North American perennial grass, using 15N-enriched N2 isotopic tracer additions in a combination of in vitro, greenhouse, and field experiments to estimate how much N is assimilated, where fixation takes place, and the likely N-fixing taxa present. Using in vitro incubations, we documented fixation in root-free rhizosphere soil and on root surfaces, with average rates of 3.8 μg N g root−1 d−1 on roots and 0.81 μg N g soil−1 d−1 in soil. In greenhouse transplants, N fixation occurred only in the early growing season, but in the field, fixation was irregularly detectable throughout the 3-month growing season. Soil, leaves, stems, and roots all contained diazotrophs and incorporated fixed N2. Metagenomic analysis suggested that microbial communities were distinct among tissue types and influenced by N fertilizer application. A diverse array of microbes inhabiting the rhizosphere, and possibly aboveground tissues, appear to be episodically contributing fixed N to switchgrass.

Declines in northern forest tree growth following snowpack decline and soil freezing.

Abstract: Changes in growing season climate are often the foci of research exploring forest response to climate change. By contrast, little is known about tree growth response to projected declines in winter snowpack and increases in soil freezing in seasonally snow-covered forest ecosystems, despite extensive documentation of the importance of winter climate in mediating ecological processes. We conducted a 5-year snow-removal experiment whereby snow was removed for the first 4-5 weeks of winter in a northern hardwood forest at the Hubbard Brook Experimental Forest in New Hampshire, USA. Our results indicate that adverse impacts of reduced snowpack and increased soil freezing on the physiology of Acer saccharum (sugar maple), a dominant species across northern temperate forests, are accompanied by a 40 ± 3% reduction in aboveground woody biomass increment, averaged across the 6 years following the start of the experiment. Further, we find no indication of growth recovery 1 year after cessation of the experiment. Based on these findings, we integrate spatial modeling of snowpack depth with forest inventory data to develop a spatially explicit, regional-scale assessment of the vulnerability of forest aboveground growth to projected declines in snowpack depth and increased soil frost. These analyses indicate that nearly 65% of sugar maple basal area in the northeastern United States resides in areas that typically experience insulating snowpack. However, under the RCP 4.5 and 8.5 emissions scenarios, we project a 49%-95% reduction in forest area experiencing insulating snowpack by the year 2099 in the northeastern United States, leaving large areas of northern forest vulnerable to these changes in winter climate, particularly along the northern edge of the region. Our study demonstrates that research focusing on growing season climate alone overestimates the stimulatory effect of warming temperatures on tree and forest growth in seasonally snow-covered forests.

Variability of thermal and precipitation conditions in the growing season in Poland in the years 1966–2015

Abstract: The aim of the study was to identify the thermal and precipitation conditions and their changes in the growing season in Poland in the years 1966–2015. Data on average daily air temperature and daily precipitation totals for 30 stations from the period of 1966–2015 were used. The data were obtained from the collections of the Institute of Meteorology and Water Management—National Research Institute. The growing season was defined as the period of average daily air temperature ≥ 5 °C. The mathematical formulas proposed by Guminski (1948) were used to determine its start and end dates. In the growing season in Poland in the years 1966–2015, there were more significant changes in the thermal conditions than there were in the precipitation conditions. In terms of long-term trends over the study period, thermal conditions during the growing season are characterised by an increase in mean air temperature, an increase in the sum of air temperatures and an increasing occurrence of seasons classified as above-normal seasons. Precipitation conditions of the growing season show large temporal and spatial variations in precipitation and a predominance of normal conditions. The changes in precipitation were not statistically significant, except for Świnoujście.