S
Sumio Sugano
Researcher at University of Tokyo
Publications - 394
Citations - 34789
Sumio Sugano is an academic researcher from University of Tokyo. The author has contributed to research in topics: Gene & Complementary DNA. The author has an hindex of 76, co-authored 393 publications receiving 31681 citations. Previous affiliations of Sumio Sugano include Tokyo Medical and Dental University & Rockefeller University.
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Journal ArticleDOI
The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants
Stefan A. Rensing,Daniel Lang,Andreas Zimmer,Astrid Terry,Asaf Salamov,Harris Shapiro,Tomoaki Nishiyama,Pierre-François Perroud,Erika Lindquist,Yasuko Kamisugi,Takako Tanahashi,Takako Tanahashi,Keiko Sakakibara,Tomomichi Fujita,Kazuko Oishi,Tadasu Shin-I,Yoko Kuroki,Atsushi Toyoda,Yutaka Suzuki,Shin-ichi Hashimoto,Kazuo Yamaguchi,Sumio Sugano,Yuji Kohara,Yuji Kohara,Asao Fujiyama,Asao Fujiyama,Aldwin M. Anterola,Setsuyuki Aoki,Neil W. Ashton,W. Brad Barbazuk,Elizabeth I. Barker,Jeffrey L. Bennetzen,Robert E. Blankenship,Sung Hyun Cho,Susan K. Dutcher,Mark Estelle,Jeffrey A. Fawcett,Heidrun Gundlach,Kousuke Hanada,Alexander Heyl,Karen A. Hicks,Karen A. Hicks,Jon Hughes,Martin Lohr,Klaus F. X. Mayer,Alexander N. Melkozernov,Takashi Murata,Takashi Murata,David R. Nelson,Birgit Pils,Michael J. Prigge,Bernd Reiss,Tanya Renner,Stephane Rombauts,Paul J. Rushton,Anton A. Sanderfoot,Gabriele Schween,Shin-Han Shiu,Kurt Stueber,Frederica L. Theodoulou,Hank Tu,Yves Van de Peer,P. J. Verrier,Elizabeth R. Waters,Andrew J. Wood,Lixing Yang,David J. Cove,David J. Cove,Andrew C. Cuming,Mitsuyasu Hasebe,Mitsuyasu Hasebe,Susan Lucas,Brent D. Mishler,Ralf Reski,Igor V. Grigoriev,Ralph S. Quatrano,Jeffrey L. Boore,Jeffrey L. Boore +77 more
TL;DR: This comparison reveals genomic changes concomitant with the evolutionary movement to land, including a general increase in gene family complexity; loss of genes associated with aquatic environments; acquisition of genes for tolerating terrestrial stresses; and the development of the auxin and abscisic acid signaling pathways for coordinating multicellular growth and dehydration response.
Journal ArticleDOI
Frequent pathway mutations of splicing machinery in myelodysplasia
Kenichi Yoshida,Masashi Sanada,Yuichi Shiraishi,Daniel Nowak,Yasunobu Nagata,Ryo Yamamoto,Yusuke Sato,Aiko Sato-Otsubo,Ayana Kon,Masao Nagasaki,George Chalkidis,Yutaka Suzuki,Masashi Shiosaka,Ryoichiro Kawahata,Tomoyuki Yamaguchi,Makoto Otsu,Naoshi Obara,Mamiko Sakata-Yanagimoto,Ken Ishiyama,Hiraku Mori,Florian Nolte,Wolf-Karsten Hofmann,Shuichi Miyawaki,Sumio Sugano,Claudia Haferlach,H. Phillip Koeffler,H. Phillip Koeffler,Lee Yung Shih,Torsten Haferlach,Shigeru Chiba,Hiromitsu Nakauchi,Satoru Miyano,Seishi Ogawa +32 more
TL;DR: The results provide the first evidence indicating that genetic alterations of the major splicing components could be involved in human pathogenesis, also implicating a novel therapeutic possibility for myelodysplasia.
Journal ArticleDOI
The genome of the social amoeba Dictyostelium discoideum
Ludwig Eichinger,Justin A. Pachebat,Justin A. Pachebat,Gernot Glöckner,Marie-Adèle Rajandream,Richard Sucgang,Matthew Berriman,J. Song,Rolf Olsen,Karol Szafranski,Qikai Xu,Budi Tunggal,Sarah K. Kummerfeld,Martin Madera,Bernard Anri Konfortov,Francisco Rivero,Alan T. Bankier,Rüdiger Lehmann,N. Hamlin,Robert L. Davies,Pascale Gaudet,Petra Fey,Karen E Pilcher,Guokai Chen,David L. Saunders,Erica Sodergren,P. Davis,Arnaud Kerhornou,X. Nie,Neil Hall,Christophe Anjard,Lisa Hemphill,Nathalie Bason,Patrick Farbrother,Brian A. Desany,Eric M. Just,Takahiro Morio,René Rost,Carol Churcher,J. Cooper,Stephen F. Haydock,N. van Driessche,Ann Cronin,Ian Goodhead,Donna M. Muzny,T. Mourier,Arnab Pain,Mingyang Lu,D. Harper,R. Lindsay,Heidi Hauser,Kylie R. James,M. Quiles,M. Madan Babu,Tsuneyuki Saito,Carmen Buchrieser,A. Wardroper,A. Wardroper,Marius Felder,M. Thangavelu,D. Johnson,Andrew J Knights,H. Loulseged,Karen Mungall,Karen Oliver,Claire Price,Michael A. Quail,Hideko Urushihara,Judith Hernandez,Ester Rabbinowitsch,David Steffen,Mandy Sanders,Jun Ma,Yuji Kohara,Sarah Sharp,Mark Simmonds,S. Spiegler,Adrian Tivey,Sumio Sugano,Brian White,Danielle Walker,John Woodward,Thomas Winckler,Yoshiaki Tanaka,Gad Shaulsky,Michael Schleicher,George M. Weinstock,André Rosenthal,Edward C. Cox,Rex L. Chisholm,Richard A. Gibbs,William F. Loomis,Matthias Platzer,Robert R. Kay,Jeffrey G. Williams,Paul H. Dear,Angelika A. Noegel,Bart Barrell,Adam Kuspa +98 more
TL;DR: A proteome-based phylogeny shows that the amoebozoa diverged from the animal–fungal lineage after the plant–animal split, but Dictyostelium seems to have retained more of the diversity of the ancestral genome than have plants, animals or fungi.
Journal ArticleDOI
The medaka draft genome and insights into vertebrate genome evolution
Masahiro Kasahara,Kiyoshi Naruse,Shin Sasaki,Yoichiro Nakatani,Wei Qu,Budrul Ahsan,Tomoyuki Yamada,Yukinobu Nagayasu,Koichiro Doi,Yasuhiro Kasai,Tomoko Jindo,Daisuke Kobayashi,Atsuko Shimada,Atsushi Toyoda,Yoko Kuroki,Asao Fujiyama,Takashi Sasaki,Atsushi Shimizu,Shuichi Asakawa,Nobuyoshi Shimizu,Shin-ichi Hashimoto,Jun Yang,Yongjun Lee,Kouji Matsushima,Sumio Sugano,Mitsuru Sakaizumi,Takanori Narita,Takanori Narita,Kazuko Ohishi,Shinobu Haga,Fumiko Ohta,Hisayo Nomoto,Keiko Nogata,Tomomi Morishita,Tomoko Endo,Tadasu Shin-I,Hiroyuki Takeda,Shinichi Morishita,Yuji Kohara +38 more
TL;DR: A high-quality draft genome sequence of a small egg-laying freshwater teleost, medaka, revealed that eight major interchromosomal rearrangements took place in a remarkably short period of ∼50 Myr after the whole-genome duplication event in the teleost ancestor and afterwards, intriguingly, the medaka genome preserved its ancestral karyotype for more than 300Myr.
Journal ArticleDOI
Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D
Motomichi Matsuzaki,Osami Misumi,Tadasu Shin-I,Shinichiro Maruyama,Manabu Takahara,Shin-ya Miyagishima,Toshiyuki Mori,Keiji Nishida,Fumi Yagisawa,Keishin Nishida,Yamato Yoshida,Yoshiki Nishimura,Shunsuke Nakao,Tamaki Kobayashi,Yu Momoyama,Tetsuya Higashiyama,Ayumi Minoda,Masako Sano,Hisayo Nomoto,Kazuko Oishi,Hiroko Hayashi,Fumiko Ohta,Satoko Nishizaka,Shinobu Haga,Sachiko Miura,Tomomi Morishita,Yukihiro Kabeya,Kimihiro Terasawa,Yutaka Suzuki,Yasuyaki Ishii,Shuichi Asakawa,Hiroyoshi Takano,Niji Ohta,Haruko Kuroiwa,Kan Tanaka,Nobuyoshi Shimizu,Sumio Sugano,Naoki Sato,Hisayoshi Nozaki,Naotake Ogasawara,Yuji Kohara,Tsuneyoshi Kuroiwa +41 more
TL;DR: The results indicate that the C. merolae genome provides a model system with a simple gene composition for studying the origin, evolution and fundamental mechanisms of eukaryotic cells.