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Journal ArticleDOI

The Tol2kit: a multisite gateway-based construction kit for Tol2 transposon transgenesis constructs.

TLDR
The Tol2kit greatly facilitates zebrafish transgenesis, simplifies the sharing of clones, and enables large‐scale projects testing the functions of libraries of regulatory or coding sequences.
Abstract
Transgenesis is an important tool for assessing gene function. In zebrafish, transgenesis has suffered from three problems: the labor of building complex expression constructs using conventional subcloning; low transgenesis efficiency, leading to mosaicism in transient transgenics and infrequent germline incorporation; and difficulty in identifying germline integrations unless using a fluorescent marker transgene. The Tol2kit system uses site-specific recombination-based cloning (multisite Gateway technology) to allow quick, modular assembly of [promoter]-[coding sequence]-[3' tag] constructs in a Tol2 transposon backbone. It includes a destination vector with a cmlc2:EGFP (enhanced green fluorescent protein) transgenesis marker and a variety of widely useful entry clones, including hsp70 and beta-actin promoters; cytoplasmic, nuclear, and membrane-localized fluorescent proteins; and internal ribosome entry sequence-driven EGFP cassettes for bicistronic expression. The Tol2kit greatly facilitates zebrafish transgenesis, simplifies the sharing of clones, and enables large-scale projects testing the functions of libraries of regulatory or coding sequences.

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Citations
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Journal ArticleDOI

Insights into wild-type dynamin 2 and the consequences of DNM2 mutations from transgenic zebrafish.

TL;DR: Using the power of the zebrafish, novel insights are established into dynamin 2 localization and dynamics, and the necessary groundwork for future studies examining dynamin 1 pathomechanisms and therapy development is provided.
Journal ArticleDOI

MicroRNA-mediated control of developmental lymphangiogenesis

TL;DR: High throughput small RNA sequencing is used to identify miR-204, a highly conserved microRNA dramatically enriched in lymphatic vs. blood endothelial cells in human and zebrafish, and shows that NFATC1 suppression leads to lymphatic hyperplasia, suggesting a critical positive role for this microRNA during developmental lymphangiogenesis.
Journal ArticleDOI

Conditional and biased regeneration of cone photoreceptor types in the zebrafish retina.

TL;DR: The regenerative capacity and stereotypic retinal organization of zebrafish was capitalized on to determine the specificity with which retinal Müller glial cells replace lost neuronal cell types, adding to the growing notion that cell replacement during regeneration does not perfectly mimic programs of cell generation during development.
Journal ArticleDOI

A high-conductance chemo-optogenetic system based on the vertebrate channel Trpa1b.

TL;DR: The results demonstrate that zTrpa1b/ligand pairing offers high light sensitivity, millisecond-scale response latency in vivo, as well as adjustable channel off latency, and represents a novel tool for flexible, high-conductance optogenetics.
Journal ArticleDOI

Bsx controls pineal complex development.

TL;DR: The highly conserved homeodomain transcription factor Bsx controls zebrafish pineal gland development, laterality of the epithalamus and melatonin production.
References
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Journal ArticleDOI

Stages of embryonic development of the zebrafish.

TL;DR: A series of stages for development of the embryo of the zebrafish, Danio (Brachydanio) rerio is described, providing for flexibility and continued evolution of the staging series as the authors learn more about development in this species.
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Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein.

TL;DR: The latest red version matures more completely, is more tolerant of N-terminal fusions and is over tenfold more photostable than mRFP1, and three monomers with distinguishable hues from yellow-orange to red-orange have higher quantum efficiencies.
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An Hsp70-like protein in the ER: identity with the 78 kd glucose-regulated protein and immunoglobulin heavy chain binding protein.

TL;DR: A cDNA clone is characterized that encodes a protein related to the 70 kd heat shock protein, but is expressed in normal rat liver, and it is identical with two previously described proteins: GRP78, whose synthesis is induced by glucose starvation, and BiP, which is found bound to immunoglobulin heavy chains in pre-B cells.
Journal ArticleDOI

GAL4-VP16 is an unusually potent transcriptional activator

TL;DR: It is shown that the hybrid protein (GAL4-VP16) activates transcription unusually efficiently in mammalian cells when bound close to, or at large distances from the gene, and suggested that the activating region of VP16 may be near-maximally potent.
Journal ArticleDOI

DNA Cloning Using In Vitro Site-Specific Recombination

TL;DR: A method called recombinational cloning is described that uses in vitro site-specific recombination to accomplish the directional cloning of PCR products and the subsequent automatic subcloning of the DNA segment into new vector backbones at high efficiency.
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