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The genetic architecture of sporadic and recurrent miscarriage

Triin Laisk, +66 more
- 12 Mar 2019 - 
- pp 575167
TLDR
The results implicate that miscarriage etiopathogenesis is partly driven by genetic variation related to gonadotropin regulation, placental biology and progesterone production, as well as biobank-scale Mendelian randomization, heritability and, genetic correlation analyses.
Abstract
Miscarriage is a common complex trait that affects 10-25% of clinically confirmed pregnancies1,2. Here we present the first large-scale genetic association analyses with 69,118 cases from five different ancestries for sporadic miscarriage and 750 cases of European ancestry for recurrent miscarriage, and up to 359,469 female controls. We identify one genome-wide significant association on chromosome 13 (rs146350366, minor allele frequency (MAF) 1.2%, Pmeta=3.2× -8 (CI) 1.2-1.6) for sporadic miscarriage in our European ancestry meta-analysis (50,060 cases and 174,109 controls), located near FGF9 involved in pregnancy maintenance3 and progesterone production4. Additionally, we identified three genome-wide significant associations for recurrent miscarriage, including a signal on chromosome 9 (rs7859844, MAF=6.4%, Pmeta=1.3× -8 in controlling extravillous trophoblast motility5. We further investigate the genetic architecture of miscarriage with biobank-scale Mendelian randomization, heritability and, genetic correlation analyses. Our results implicate that miscarriage etiopathogenesis is partly driven by genetic variation related to gonadotropin regulation, placental biology and progesterone production.

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Journal ArticleDOI

Recurrent pregnancy loss.

TL;DR: Recurrent pregnancy loss is a distressing pregnancy disorder experienced by approximately 25% of women trying to conceive as mentioned in this paper, it is defined as the failure of two or more clinically recognized pregnancies before 20-24 weeks of gestation and includes embryonic and fetal losses.
Journal ArticleDOI

Genomic Analysis of Spontaneous Abortion in Holstein Heifers and Primiparous Cows.

TL;DR: A genome-wide association analysis, gene-set enrichment analysis–single nucleotide polymorphism, and ingenuity pathway analysis were used to identify regions, pathways, and master regulators associated with SA in heifers, cows, and a combined population.
References
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Journal ArticleDOI

METAL: fast and efficient meta-analysis of genomewide association scans.

TL;DR: METAL provides a computationally efficient tool for meta-analysis of genome-wide association scans, which is a commonly used approach for improving power complex traits gene mapping studies.
Journal ArticleDOI

Functional mapping and annotation of genetic associations with FUMA

TL;DR: FUMA is a web-based bioinformatics tool that uses a combination of positional, eQTL and chromatin interaction mapping to prioritize likely causal variants and genes and directly aid in generating hypotheses that are testable in functional experiments aimed at proving causal relations.
Journal ArticleDOI

Incidence of Early Loss of Pregnancy

TL;DR: The total rate of pregnancy loss after implantation, including clinically recognized spontaneous abortions, was 31 percent and most of the 40 women with unrecognized early pregnancy losses had normal fertility, since 95 percent of them subsequently became clinically pregnant within two years.
Journal ArticleDOI

Maternal age and fetal loss: population based register linkage study

TL;DR: Fetal loss is high in women in their late 30s or older, irrespective of reproductive history, and should be taken into consideration in pregnancy planning and counselling.
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