National Autonomous University of Mexico

About: National Autonomous University of Mexico is a education organization based out in Mexico City, Distrito Federal, Mexico. It is known for research contribution in the topics: Population & Galaxy. The organization has 72868 authors who have published 127797 publications receiving 2285543 citations. The organization is also known as: UNAM & Universidad Nacional Autónoma de México.

RegulonDB (version 3.2): transcriptional regulation and operon organization in Escherichia coli K-12

Abstract: RegulonDB is a database on mechanisms of transcription regulation and operon organization in Escherichia coli K-12. The current version has considerably increased numbers of regulatory elements such as promoters, binding sites and terminators. The complete repertoire of known and predicted DNA-binding transcriptional regulators can be considered to be included in this version. The database now distinguishes different allosteric conformations of regulatory proteins indicating the one active in binding and regulating the different promoters. A new set of operon predictions has been incorporated. The relational design has been modified accordingly. Furthermore, a major improvement is a graphic display enabling browsing of the database with a Java-based graphic user interface with three zoom-levels connected to properties of each chromo­somal element. The purpose of these modifications is to make RegulonDB a useful tool and control set for tran­scriptome experiments. RegulonDB can be accessed on the web at the URL: http://www.cifn.unam.mx/Computational_Biology/regulondb/

Antibiotics as Major Disruptors of Gut Microbiota

Abstract: Advances in culture-independent research techniques have led to an increased understanding of the gut microbiota and the role it plays in health and disease. The intestine is populated by a complex microbial community that is organized around a network of metabolic interdependencies. It is now understood that the gut microbiota is vital for normal development and functioning of the human body, especially for the priming and maturation of the adaptive immune system. Antibiotic use can have several negative effects on the gut microbiota, including reduced species diversity, altered metabolic activity, and the selection of antibiotic-resistant organisms, which in turn can lead to antibiotic-associated diarrhea and recurrent Clostridioides difficile infections. There is also evidence that early childhood exposure to antibiotics can lead to several gastrointestinal, immunologic, and neurocognitive conditions. The increase in the use of antibiotics in recent years suggests that these problems are likely to become more acute or more prevalent in the future. Continued research into the structure and function of the gut microbiota is required to address this challenge.

Pathway engineering for the production of aromatic compounds in Escherichia coli

Abstract: Glucose is the preferred substrate for certain fermentation processes. During its internalization and concomitant formation of glucose-6-phosphate through the glucose phosphotransferase system (PTS), one molecule of phosphoenolpyruvate (PEP) is consumed. Together with erythrose 4-phosphate (E4P), PEP is condensed to form 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP), the first intermediate of the common segment of the aromatic pathway. From this metabolic route, several commercially important aromatic compounds can be obtained. We have selected Escherichia coli mutants that can transport glucose efficiently by a non-PTS uptake system. In theory, this process should increase the availability of PEP for other biosynthetic reactions. Using these mutants, in a background where the DAHP synthase (the enzyme that catalyzes the condensation of PEP and E4P into DAHP) was amplified, we were able to show that at least some of the PEP saved during glucose transport, can be redirected into the aromatic pathway. This increased carbon commitment to the aromatic pathway was enhanced still further upon amplification of the E. coli tktA gene that encodes for a transketolase involved in the biosynthesis of E4P.

A Catalog of CH 3 OH 7 0 -6 1 A + Maser Sources in Massive Star-forming Regions

Abstract: We present a Very Large Array survey of 44 massive star-forming regions in the 44 GHz 70-61 A+ methanol transition; 37 fields showed maser emission. Thirty-one sources were also observed in the 23 GHz 92-101 A+ methanol line; two fields showed maser emission. Although the 44 GHz line is a class I maser, we find a large number of these masers in relatively close association with H II regions and water masers. Several sources show strong evidence for a correlation between 44 GHz masers and shocked molecular gas, supporting the interpretation that molecular outflows may give rise to class I maser emission. We provide maser positions with arcsecond accuracy that not only locate the masers with respect to other star formation phenomena, but also provide, for the stronger masers, phase referencing sources that can be used to calibrate future 7 mm (44 GHz) observations of these regions.

Loop quantum gravity and light propagation

Abstract: Within loop quantum gravity we construct a coarse-grained approximation for the Einstein-Maxwell theory that yields effective Maxwell equations in flat spacetime comprising Planck scale corrections. The corresponding Hamiltonian is defined as the expectation value of the electromagnetic term in the Einstein-Maxwell Hamiltonian constraint, regularized in the manner of Thiemann, with respect to a would-be semiclassical state. The resulting energy dispersion relations entail Planck scale corrections to those in flat spacetime. Both the helicity dependent contribution of Gambini and Pullin and, for a value of a parameter of our approximation, that of Ellis and co-workers are recovered. The electric-magnetic asymmetry in the regularization procedure yields nonlinearities only in the magnetic sector which are briefly discussed. Observations of cosmological gamma ray bursts might eventually lead to the needed accuracy to study some of these quantum gravity effects.