M
Madeline A. Crosby
Researcher at Harvard University
Publications - 30
Citations - 6933
Madeline A. Crosby is an academic researcher from Harvard University. The author has contributed to research in topics: FlyBase : A Database of Drosophila Genes & Genomes & Gene. The author has an hindex of 22, co-authored 28 publications receiving 6395 citations. Previous affiliations of Madeline A. Crosby include California Institute of Technology.
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Journal ArticleDOI
Insights into social insects from the genome of the honeybee Apis mellifera
George M. Weinstock,Gene E. Robinson,Richard A. Gibbs,Kim C. Worley,Jay D. Evans,Ryszard Maleszka,Hugh M. Robertson,Daniel B. Weaver,Martin Beye,Peer Bork,Christine G. Elsik,Klaus Hartfelder,Greg J. Hunt,Evgeny M. Zdobnov,Gro V. Amdam,Mrcia M.G. Bitondi,Anita M. Collins,Alexandre S. Cristino,H. Michael G. Lattorff,Carlos H. Lobo,Robin F. A. Moritz,Francis M. F. Nunes,Robert E. Page,Zilá Luz Paulino Simões,Diana E. Wheeler,Piero Carninci,Shiro Fukuda,Yoshihide Hayashizaki,Chikatoshi Kai,Jun Kawai,Naoko Sakazume,Daisuke Sasaki,Michihira Tagami,Stefan Albert,Geert Baggerman,Kyle T. Beggs,Guy Bloch,Giuseppe Cazzamali,Mira Cohen,Mark D. Drapeau,Dorothea Eisenhardt,Christine Emore,Michael A. Ewing,Susan E. Fahrbach,Sylvain Forêt,Cornelis J. P. Grimmelikhuijzen,Frank Hauser,Amanda B. Hummon,Jurgen Huybrechts,Andrew K. Jones,Tatsuhiko Kadowaki,Noam Kaplan,Robert Kucharski,Grard Leboulle,Michal Linial,J. Troy Littleton,Alison R. Mercer,T.A. Richmond,Sandra L. Rodriguez-Zas,Elad B. Rubin,David B. Sattelle,David I. Schlipalius,Liliane Schoofs,Yair Shemesh,Jonathan V. Sweedler,Rodrigo A. Velarde,Peter Verleyen,Evy Vierstraete,Michael Williamson,Seth A. Ament,Susan J. Brown,Miguel Corona,Peter K. Dearden,W. Augustine Dunn,Michelle M. Elekonich,Tomoko Fujiyuki,Irene Gattermeier,Tanja Gempe,Martin Hasselmann,Eriko Kage,Azusa Kamikouchi,Takeo Kubo,Takekazu Kunieda,Marcé D. Lorenzen,Natalia V. Milshina,Mizue Morioka,Kazuaki Ohashi,Ross Overbeek,Christian A. Ross,Morten Schioett,Teresa D. Shippy,Hideaki Takeuchi,Amy L. Toth,Judith H. Willis,Megan J. Wilson,Karl H.J. Gordon,Ivica Letunic,Kevin J. Hackett,Jane Peterson,Adam Felsenfeld,Mark S. Guyer,Michel Solignac,Richa Agarwala,Jean Marie Cornuet,M. Monnerot,Florence Mougel,Justin T. Reese,Dominique Vautrin,Joseph J. Gillespie,Joseph J. Gillespie,Jamie J. Cannone,Robin R. Gutell,J. Spencer Johnston,Michael B. Eisen,Michael B. Eisen,Venky N. Iyer,Vivek Iyer,Peter Kosarev,Aaron J. Mackey,Victor V. Solovyev,Alexandre Souvorov,Katherine A Aronstein,Katarína Bíliková,Yanping Chen,Andrew G. Clark,Laura I. Decanini,William M. Gelbart,Charles Hetru,Dan Hultmark,Jean-Luc Imler,Haobo Jiang,Michael R. Kanost,Kiyoshi Kimura,Brian P. Lazzaro,Dawn Lopez,Jozef Šimúth,Graham J. Thompson,Zhen Zou,Pieter J. de Jong,Erica Sodergren,Miklós Csürös,Aleksandar Milosavljevic,Kazutoyo Osoegawa,Stephen Richards,Chung Li Shu,Laurent Duret,Eran Elhaik,Dan Graur,Juan Manuel Anzola,Kathryn S. Campbell,Kevin L. Childs,Derek Collinge,Madeline A. Crosby,C. Michael Dickens,L. Sian Grametes,Christina M. Grozinger,Peter L. Jones,Mireia Jordà,Xu Ling,Beverly B. Matthews,Jonathan Miller,Craig Mizzen,Miguel A. Peinado,Jeffrey G. Reid,Jeffrey G. Reid,Susan M. Russo,Andrew J. Schroeder,Susan E. St. Pierre,Ying Wang,Pinglei Zhou,Huaiyang Jiang,Paul Kitts,Barbara J. Ruef,Anand Venkatraman,Lan Zhang,Gildardo Aquino-Perez,Charles W. Whitfield,Susanta K. Behura,Stewart H. Berlocher,Walter S. Sheppard,Deborah R. Smith,Andrew V. Suarez,Neil D. Tsutsui,Xuehong Wei,David A. Wheeler,Paul Havlak,Bingshan Li,Yue Liu,Angela Jovilet,Sandra L. Lee,Lynne V. Nazareth,Ling Ling Pu,Rachel Thorn,Viktor Stolc,Thomas C. Newman,Manoj P. Samanta,Waraporn Tongprasit,Charles Claudianos,Charles Claudianos,May R. Berenbaum,Sunita Biswas,Sunita Biswas,Dirk C. de Graaf,René Feyereisen,Reed M. Johnson,John G. Oakeshott,Hilary Ranson,Mary A. Schuler,Donna M. Muzny,Joseph Chacko,Clay Davis,Huyen Dinh,Rachel Gill,Judith Hernandez,Sandra Hines,Jennifer Hume,La Ronda Jackson,Christie Kovar,Lora Lewis,George Miner,Margaret Morgan,Ngoc Nguyen,Geoffrey Okwuonu,Heidi Paul,Jireh Santibanez,Glenford Savery,Amanda F. Svatek,Donna Villasana,Rita A. Wright +228 more
TL;DR: The genome sequence of the honeybee Apis mellifera is reported, suggesting a novel African origin for the species A. melliferA and insights into whether Africanized bees spread throughout the New World via hybridization or displacement.
Journal ArticleDOI
Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures
Alexander Stark,Michael F. Lin,Pouya Kheradpour,Jakob Skou Pedersen,Jakob Skou Pedersen,Leopold Parts,Leopold Parts,Joseph W. Carlson,Madeline A. Crosby,Matthew D. Rasmussen,Sushmita Roy,Ameya N. Deoras,J. Graham Ruby,Julius Brennecke,Emily Hodges,Angie S. Hinrichs,Anat Caspi,Benedict Paten,Benedict Paten,Benedict Paten,Seung-Won Park,Mira V. Han,Morgan L. Maeder,Benjamin J. Polansky,Bryanne E. Robson,Stein Aerts,Jacques van Helden,Bassem A. Hassan,Donald G. Gilbert,Deborah Eastman,Michael D. Rice,Michael P. Weir,Matthew W. Hahn,Yongkyu Park,Colin N. Dewey,Lior Pachter,W. James Kent,David Haussler,Eric C. Lai,David P. Bartel,Gregory J. Hannon,Thomas C. Kaufman,Michael B. Eisen,Michael B. Eisen,Andrew G. Clark,Douglas Smith,Susan E. Celniker,William M. Gelbart,Manolis Kellis +48 more
TL;DR: This work uses the genomes of 12 Drosophila species for the de novo discovery of functional elements in the fly, and identifies several classes of pre- and post-transcriptional regulatory motifs, and predicts individual motif instances with high confidence.
Journal ArticleDOI
FlyBase at 25: looking to the future
L. Sian Gramates,Steven J Marygold,Gilberto dos Santos,Jose-Maria Urbano,Giulia Antonazzo,Beverley B. Matthews,Alix J. Rey,Christopher J. Tabone,Madeline A. Crosby,David B. Emmert,Kathleen Falls,Joshua L. Goodman,Yanhui Hu,Laura Ponting,Andrew J. Schroeder,Victor B. Strelets,Jim Thurmond,Pinglei Zhou +17 more
TL;DR: New features, datasets, reagent collections, and data presentations are described that address the needs of the Drosophila research community, including enhanced orthology data, Human Disease Model Reports, protein domain search and visualization, concise gene summaries, and a portal for external resources.
Journal ArticleDOI
Comparative genome sequencing of Drosophila pseudoobscura: Chromosomal, gene, and cis-element evolution
Stephen Richards,Yue Liu,Bettencourt Brian,Pavel Hradecky,Stan Letovsky,Rasmus Nielsen,Kevin R. Thornton,Melissa J. Hubisz,Rui Chen,Richard P. Meisel,Olivier Couronne,Olivier Couronne,Sujun Hua,Mark A. Smith,Peili Zhang,Jing Liu,Harmen J. Bussemaker,Marinus F. van Batenburg,Marinus F. van Batenburg,Sally Howells,Steven E. Scherer,Erica Sodergren,Beverly B. Matthews,Madeline A. Crosby,Andrew J. Schroeder,Daniel Ortiz-Barrientos,Catharine M. Rives,Michael L. Metzker,Donna M. Muzny,Graham R. Scott,David Steffen,David A. Wheeler,Kim C. Worley,Paul Havlak,K. James Durbin,Amy Egan,Rachel Gill,Jennifer Hume,Margaret Morgan,George Miner,Cerissa Hamilton,Yanmei Huang,Lenee Waldron,Daniel Verduzco,Kerstin P. Clerc-Blankenburg,Inna Dubchak,Mohamed A. F. Noor,Wyatt W. Anderson,Kevin P. White,Andrew G. Clark,Stephen W. Schaeffer,William M. Gelbart,George M. Weinstock,Richard A. Gibbs +53 more
TL;DR: A pattern of repeat-mediated chromosomal rearrangement, and high coadaptation of both male genes and cis-regulatory sequences emerges as important themes of genome divergence between these species of Drosophila.
Journal ArticleDOI
Apollo: a sequence annotation editor
Suzanna E. Lewis,Smj Searle,Nomi L. Harris,Nomi L. Harris,M Gibson,Vivek Iyer,J. Richter,Colin Wiel,Leyla Bayraktaroglu,Ewan Birney,Madeline A. Crosby,Joshua S. Kaminker,Beverley B. Matthews,Simon Prochnik,Christopher D. Smith,Jonathan L. Tupy,Gerald M. Rubin,Sima Misra,Christopher J. Mungall,Michele Clamp +19 more
TL;DR: FlyBase biologists successfully used Apollo to annotate the Drosophila melanogaster genome and it is increasingly being used as a starting point for the development of customized annotation editing tools for other genome projects.