V
Viktor Stolc
Researcher at Ames Research Center
Publications - 50
Citations - 10594
Viktor Stolc is an academic researcher from Ames Research Center. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 28, co-authored 50 publications receiving 9945 citations. Previous affiliations of Viktor Stolc include Yale University & Stanford University.
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Journal ArticleDOI
The ENCODE (ENCyclopedia of DNA elements) Project
Elise A. Feingold,Peter J. Good,Mark S. Guyer,S. Kamholz,L. Liefer,Kris A. Wetterstrand,Francis S. Collins,Thomas R. Gingeras,Dione Kampa,E. A. Sekinger,Jill Cheng,H. Hirsch,Srinka Ghosh,Zhou Zhu,Sandeep Patel,Antonio Piccolboni,A. Yang,Hari Tammana,Stefan Bekiranov,Philipp Kapranov,Rhonda Harrison,George M. Church,Kevin Struhl,Bing Ren,Tae Hoon Kim,Leah O. Barrera,Chunxu Qu,S. van Calcar,R. Luna,C. K. Glass,M. G. Rosenfeld,Roderic Guigó,Stylianos E. Antonarakis,Ewan Birney,Michael R. Brent,Lior Pachter,Alexandre Reymond,Emmanouil T. Dermitzakis,Colin N. Dewey,Damian Keefe,F. Denoeud,Julien Lagarde,Jennifer L. Ashurst,Tim Hubbard,Jan-Jaap Wesselink,Robert Castelo,Eduardo Eyras,Richard M. Myers,Arend Sidow,Serafim Batzoglou,Nathan D. Trinklein,Sara J. Hartman,Shelley Force Aldred,Elizabeth Anton,Diane I. Schroeder,S. S. Marticke,Long H. Nguyen,Jeremy Schmutz,Jane Grimwood,Mark Dickson,Gregory M. Cooper,Eric A. Stone,George Asimenos,Michael Brudno,Anindya Dutta,Neerja Karnani,Christopher M. Taylor,H. K. Kim,Gabriel Robins,George Stamatoyannopoulos,John A. Stamatoyannopoulos,Michael O. Dorschner,Peter J. Sabo,Michael Hawrylycz,Richard Humbert,James C. Wallace,Min-Feng Yu,Patrick A. Navas,M. McArthur,William Stafford Noble,Ian Dunham,Christof Koch,Robert M. Andrews,Gayle K. Clelland,Sarah Wilcox,Joanna C. Fowler,Keith D. James,P. Groth,Oliver M. Dovey,Peter D. Ellis,Vicki L. Wraight,Andrew J. Mungall,Pawandeep Dhami,Heike Fiegler,Cordelia Langford,Nigel P. Carter,David Vetrie,Michael Snyder,Ghia Euskirchen,Alexander E. Urban,Ugrappa Nagalakshmi,John L. Rinn,George V. Popescu,Paul Bertone,Stephen Hartman,Joel Rozowsky,Olof Emanuelsson,Thomas Royce,Sambath Chung,Mark Gerstein,Zheng Lian,Jane B. Lian,Y. Nakayama,Sherman M. Weissman,Viktor Stolc,W. Tongprasit,H. Sethi,Steven J.M. Jones,Marco A. Marra,H. Shin,Jacquie Schein,Michele Clamp,Kerstin Lindblad-Toh,Jean L. Chang,David B. Jaffe,Michael Kamal,Eric S. Lander,Tarjei S. Mikkelsen,Jade P. Vinson,Michael C. Zody,P. J. De Jong,Kazutoyo Osoegawa,Mikhail Nefedov,Baoli Zhu,Andreas D. Baxevanis,Tyra G. Wolfsberg,Gregory E. Crawford,James R R Whittle,Ingeborg Holt,T. J. Vasicek,D. Zhou,Shu-Jin Luo,Eric D. Green,Gerry Bouffard,Elliott H. Margulies,Matthew E. Portnoy,Nancy F. Hansen,Pamela J. Thomas,Jenny McDowell,Baishali Maskeri,Alice C. Young,Jacquelyn R. Idol,Robert W. Blakesley,Greg Schuler,Webb Miller,Ross C. Hardison,Laura Elnitski,Prachi Shah,Steven L. Salzberg,Mihaela Pertea,William H. Majoros,David Haussler,Daryl J. Thomas,Kate R. Rosenbloom,Hiram Clawson,Adam Siepel,W. J. Kent,Zhiping Weng,S. Jin,Anason S. Halees,H. Burden,Ulas Karaoz,Yutao Fu,Yong Yu,C. Ding,Charles R. Cantor,Robert E. Kingston,Jonathan H. Dennis,Roland Green,Michael A. Singer,Todd Richmond,J. E. Norton,Peggy J. Farnham,Matthew J. Oberley,D. R. Inman,M. R. McCormick,H. Kim,C. L. Middle,Michael C. Pirrung,Xiang-Dong Fu,Y. S. Kwon,Z. Ye,Job Dekker,Tomoko M. Tabuchi,Nele Gheldof,Josée Dostie,S. C. Harvey +196 more
TL;DR: The ENCyclopedia Of DNA Elements (ENCODE) Project is organized as an international consortium of computational and laboratory-based scientists working to develop and apply high-throughput approaches for detecting all sequence elements that confer biological function.
Journal ArticleDOI
Insights into social insects from the genome of the honeybee Apis mellifera
George M. Weinstock,Gene E. Robinson,Richard A. Gibbs,Kim C. Worley,Jay D. Evans,Ryszard Maleszka,Hugh M. Robertson,Daniel B. Weaver,Martin Beye,Peer Bork,Christine G. Elsik,Klaus Hartfelder,Greg J. Hunt,Evgeny M. Zdobnov,Gro V. Amdam,Mrcia M.G. Bitondi,Anita M. Collins,Alexandre S. Cristino,H. Michael G. Lattorff,Carlos H. Lobo,Robin F. A. Moritz,Francis M. F. Nunes,Robert E. Page,Zilá Luz Paulino Simões,Diana E. Wheeler,Piero Carninci,Shiro Fukuda,Yoshihide Hayashizaki,Chikatoshi Kai,Jun Kawai,Naoko Sakazume,Daisuke Sasaki,Michihira Tagami,Stefan Albert,Geert Baggerman,Kyle T. Beggs,Guy Bloch,Giuseppe Cazzamali,Mira Cohen,Mark D. Drapeau,Dorothea Eisenhardt,Christine Emore,Michael A. Ewing,Susan E. Fahrbach,Sylvain Forêt,Cornelis J. P. Grimmelikhuijzen,Frank Hauser,Amanda B. Hummon,Jurgen Huybrechts,Andrew K. Jones,Tatsuhiko Kadowaki,Noam Kaplan,Robert Kucharski,Grard Leboulle,Michal Linial,J. Troy Littleton,Alison R. Mercer,T.A. Richmond,Sandra L. Rodriguez-Zas,Elad B. Rubin,David B. Sattelle,David I. Schlipalius,Liliane Schoofs,Yair Shemesh,Jonathan V. Sweedler,Rodrigo A. Velarde,Peter Verleyen,Evy Vierstraete,Michael Williamson,Seth A. Ament,Susan J. Brown,Miguel Corona,Peter K. Dearden,W. Augustine Dunn,Michelle M. Elekonich,Tomoko Fujiyuki,Irene Gattermeier,Tanja Gempe,Martin Hasselmann,Eriko Kage,Azusa Kamikouchi,Takeo Kubo,Takekazu Kunieda,Marcé D. Lorenzen,Natalia V. Milshina,Mizue Morioka,Kazuaki Ohashi,Ross Overbeek,Christian A. Ross,Morten Schioett,Teresa D. Shippy,Hideaki Takeuchi,Amy L. Toth,Judith H. Willis,Megan J. Wilson,Karl H.J. Gordon,Ivica Letunic,Kevin J. Hackett,Jane Peterson,Adam Felsenfeld,Mark S. Guyer,Michel Solignac,Richa Agarwala,Jean Marie Cornuet,M. Monnerot,Florence Mougel,Justin T. Reese,Dominique Vautrin,Joseph J. Gillespie,Joseph J. Gillespie,Jamie J. Cannone,Robin R. Gutell,J. Spencer Johnston,Michael B. Eisen,Michael B. Eisen,Venky N. Iyer,Vivek Iyer,Peter Kosarev,Aaron J. Mackey,Victor V. Solovyev,Alexandre Souvorov,Katherine A Aronstein,Katarína Bíliková,Yanping Chen,Andrew G. Clark,Laura I. Decanini,William M. Gelbart,Charles Hetru,Dan Hultmark,Jean-Luc Imler,Haobo Jiang,Michael R. Kanost,Kiyoshi Kimura,Brian P. Lazzaro,Dawn Lopez,Jozef Šimúth,Graham J. Thompson,Zhen Zou,Pieter J. de Jong,Erica Sodergren,Miklós Csürös,Aleksandar Milosavljevic,Kazutoyo Osoegawa,Stephen Richards,Chung Li Shu,Laurent Duret,Eran Elhaik,Dan Graur,Juan Manuel Anzola,Kathryn S. Campbell,Kevin L. Childs,Derek Collinge,Madeline A. Crosby,C. Michael Dickens,L. Sian Grametes,Christina M. Grozinger,Peter L. Jones,Mireia Jordà,Xu Ling,Beverly B. Matthews,Jonathan Miller,Craig Mizzen,Miguel A. Peinado,Jeffrey G. Reid,Jeffrey G. Reid,Susan M. Russo,Andrew J. Schroeder,Susan E. St. Pierre,Ying Wang,Pinglei Zhou,Huaiyang Jiang,Paul Kitts,Barbara J. Ruef,Anand Venkatraman,Lan Zhang,Gildardo Aquino-Perez,Charles W. Whitfield,Susanta K. Behura,Stewart H. Berlocher,Walter S. Sheppard,Deborah R. Smith,Andrew V. Suarez,Neil D. Tsutsui,Xuehong Wei,David A. Wheeler,Paul Havlak,Bingshan Li,Yue Liu,Angela Jovilet,Sandra L. Lee,Lynne V. Nazareth,Ling Ling Pu,Rachel Thorn,Viktor Stolc,Thomas C. Newman,Manoj P. Samanta,Waraporn Tongprasit,Charles Claudianos,Charles Claudianos,May R. Berenbaum,Sunita Biswas,Sunita Biswas,Dirk C. de Graaf,René Feyereisen,Reed M. Johnson,John G. Oakeshott,Hilary Ranson,Mary A. Schuler,Donna M. Muzny,Joseph Chacko,Clay Davis,Huyen Dinh,Rachel Gill,Judith Hernandez,Sandra Hines,Jennifer Hume,La Ronda Jackson,Christie Kovar,Lora Lewis,George Miner,Margaret Morgan,Ngoc Nguyen,Geoffrey Okwuonu,Heidi Paul,Jireh Santibanez,Glenford Savery,Amanda F. Svatek,Donna Villasana,Rita A. Wright +228 more
TL;DR: The genome sequence of the honeybee Apis mellifera is reported, suggesting a novel African origin for the species A. melliferA and insights into whether Africanized bees spread throughout the New World via hybridization or displacement.
Journal ArticleDOI
Global Identification of Human Transcribed Sequences with Genome Tiling Arrays
Paul Bertone,Viktor Stolc,Viktor Stolc,Thomas Royce,Joel Rozowsky,Alexander E. Urban,Xiaowei Zhu,John L. Rinn,Waraporn Tongprasit,Manoj P. Samanta,Sherman M. Weissman,Mark Gerstein,Michael Snyder +12 more
TL;DR: This work constructed a series of high-density oligonucleotide tiling arrays representing sense and antisense strands of the entire nonrepetitive sequence of the human genome and found 10,595 transcribed sequences not detected by other methods.
Journal ArticleDOI
The genome of the sea urchin Strongylocentrotus purpuratus.
Erica Sodergren,George M. Weinstock,Eric H. Davidson,R. Andrew Cameron,Richard A. Gibbs,Robert C. Angerer,Lynne M. Angerer,Maria Ina Arnone,David R. Burgess,Robert D. Burke,James A. Coffman,Michael Dean,Maurice R. Elphick,Charles A. Ettensohn,Kathy R. Foltz,Amro Hamdoun,Richard O. Hynes,William H. Klein,William F. Marzluff,David R. McClay,Robert L. Morris,Arcady Mushegian,Arcady Mushegian,Jonathan P. Rast,L. Courtney Smith,Michael C. Thorndyke,Victor D. Vacquier,Victor D. Vacquier,Gary M. Wessel,Greg Wray,Lan Zhang,Christine G. Elsik,Christine G. Elsik,Olga Ermolaeva,Wratko Hlavina,Gretchen E. Hofmann,Paul Kitts,Melissa J. Landrum,Melissa J. Landrum,Aaron J. Mackey,Aaron J. Mackey,Donna Maglott,Georgia Panopoulou,Albert J. Poustka,Kim D. Pruitt,Victor Sapojnikov,Xingzhi Song,Alexandre Souvorov,Victor V. Solovyev,Zheng Wei,Charles A. Whittaker,Kim C. Worley,K. James Durbin,Yufeng Shen,Olivier Fedrigo,David A. Garfield,Ralph Haygood,Alexander E Primus,Rahul Satija,Tonya F. Severson,Manuel L. Gonzalez-Garay,Andrew R. Jackson,Aleksandar Milosavljevic,Mark Y. Tong,Christopher E. Killian,Brian T. Livingston,Fred H. Wilt,Nikki Adams,Nikki Adams,Robert Bellé,Robert Bellé,Seth Carbonneau,Rocky Cheung,Patrick Cormier,Patrick Cormier,Bertrand Cosson,Bertrand Cosson,Jenifer C. Croce,Antonio Fernandez-Guerra,Antonio Fernandez-Guerra,Anne Marie Genevière,Anne Marie Genevière,Manisha Goel,Hemant Kelkar,Julia Morales,Julia Morales,Odile Mulner-Lorillon,Anthony J. Robertson,Jared V. Goldstone,Bryan J. Cole,David Epel,Bert Gold,Mark E. Hahn,Meredith Howard-Ashby,Mark Scally,John J. Stegeman,Erin L. Allgood,Jonah Cool,Kyle M. Judkins,Shawn S. McCafferty,Ashlan M. Musante,Robert A. Obar,Amanda P. Rawson,Blair J. Rossetti,I. R. Gibbons,Matthew P. Hoffman,Andrew Leone,Sorin Istrail,Stefan C. Materna,Manoj P. Samanta,Viktor Stolc,Waraporn Tongprasit,Qiang Tu,Karl Frederik Bergeron,Bruce P. Brandhorst,James R.R. Whittle,Kevin Berney,David J. Bottjer,Cristina Calestani,Kevin J. Peterson,Elly Suk Hen Chow,Qiu Autumn Yuan,Eran Elhaik,Dan Graur,Justin T. Reese,Ian Bosdet,Shin Heesun,Marco A. Marra,Jacqueline E. Schein,Michele K. Anderson,Virginia Brockton,Katherine M. Buckley,Avis H. Cohen,Sebastian D. Fugmann,Taku Hibino,Mariano Loza-Coll,Audrey J. Majeske,Cynthia Messier,Sham V. Nair,Zeev Pancer,David P. Terwilliger,Cavit Agca,Enrique Arboleda,Nansheng Chen,Allison M. Churcher,Finn Hallböök,Glen Humphrey,Mohammed M. Idris,Takae Kiyama,Shuguang Liang,Dan O Mellott,Xiuqian Mu,Greg Murray,Robert Piotr Olinski,Florian Raible,Matthew L. Rowe,John S. Taylor,Kristin Tessmar-Raible,D. Wang,Karen Wilson,Karen Wilson,Shunsuke Yaguchi,Terry Gaasterland,Blanca E. Galindo,Herath Jayantha Gunaratne,Celina E. Juliano,Masashi Kinukawa,Gary W. Moy,Anna T. Neill,Mamoru Nomura,Michael Raisch,Anna Reade,Michelle M. Roux,Jia L. Song,Yi-Hsien Su,Ian K. Townley,Ekaterina Voronina,Julian L. Wong,Gabriele Amore,Margherita Branno,Euan R. Brown,Vincenzo Cavalieri,Véronique Duboc,Louise Duloquin,Constantin N. Flytzanis,Constantin N. Flytzanis,Christian Gache,François Lapraz,Thierry Lepage,Annamaria Locascio,Pedro Martinez,Giorgio Matassi,Valeria Matranga,Ryan C. Range,Francesca Rizzo,Eric Röttinger,Karen Wilson,Wendy S. Beane,Cynthia A. Bradham,Christine A. Byrum,Christine A. Byrum,Thomas D. Glenn,Sofia Hussain,Mariano A. Loza,Gerard Manning,Esther Miranda,Rebecca Thomason,Rebecca Thomason,Katherine D. Walton,Athula Wikramanayke,Charles A. Whittaker,Shu-Yu Wu,Ronghui Xu,C. Titus Brown,Lili Chen,Rachel F. Gray,Pei Yun Lee,Jongmin Nam,Paola Oliveri,Joel Smith,Donna M. Muzny,Stephanie Bell,Joseph Chacko,Andrew Cree,Stacey M. Curry,Clay Davis,Huyen Dinh,Shannon Dugan-Rocha,Fowler J,Rachel Gill,Cerrissa Hamilton,Judith Hernandez,Sandra Hines,Jennifer Hume,La Ronda Jackson,Angela Jolivet,Christie Kovar,Sandra L. Lee,Lora Lewis,George Miner,Margaret Morgan,Lynne V. Nazareth,Geoffrey Okwuonu,David A. Parker,Ling Ling Pu,Rachel Thorn,Rita A. Wright +246 more
TL;DR: The sequence and analysis of the 814-megabase genome of the sea urchin Strongylocentrotus purpuratus is reported, a model for developmental and systems biology and yields insights into the evolution of deuterostomes.
Journal ArticleDOI
Analysis of Transcription Factor HY5 Genomic Binding Sites Revealed Its Hierarchical Role in Light Regulation of Development
Jungeun Lee,Jungeun Lee,Kun He,Viktor Stolc,Viktor Stolc,Horim Lee,Pablo Figueroa,Ying Gao,Ying Gao,Waraporn Tongprasit,Hongyu Zhao,Ilha Lee,Xing Wang Deng,Xing Wang Deng +13 more
TL;DR: It is demonstrated that in vivo association of HY5 with promoter targets is not altered under distinct light qualities or during light-to-dark transition, and a model in which HY5 is a high hierarchical regulator of the transcriptional cascades for photomorphogenesis is supported.