Technion – Israel Institute of Technology

About: Technion – Israel Institute of Technology is a education organization based out in Haifa, Israel. It is known for research contribution in the topics: Population & Nonlinear system. The organization has 31714 authors who have published 79377 publications receiving 2603976 citations. The organization is also known as: Technion Israel Institute of Technology & Ṭekhniyon, Makhon ṭekhnologi le-Yiśraʼel.

Transmission Electron Microscopy

Abstract: We wrote it to be read by, and taught to, senior undergraduates and starting graduate students, rather than studied in a research laboratory. We wrote it using the same style and sentence construction that we have used in countless classroom lectures, rather than how we have written our countless (and much-less read) formal scientificpapers. In this respect particularly, wehave been deliberate in notreferencing the sources of every experimental fact or theoretical concept (although we do include some hints and clues in the chapters). However, at the end of each chapter we have included groups of references that should lead you to the best sources in the literature and help you go into more depth as you become more confident about what you are looking for. We are great believers in the value of history as the basis for under- standing the present and so the history of the techniques and key historical references are threaded throughout the book. Just because a reference is dated in the previous century (or even the antepenultimate century) doesn’t mean it isn’t useful! Likewise, with the numerous figures drawn from across the fields of materials science and engineering and nanotechnology, we do not reference the source in each caption. But at the very end of the book each of our many generous colleagues whose work we have used is clearly acknowledged.

Guidelines for the use and interpretation of assays for monitoring autophagy

Abstract: In 2008 we published the first set of guidelines for standardizing research in autophagy. Since then, research on this topic has continued to accelerate, and many new scientists have entered the field. Our knowledge base and relevant new technologies have also been expanding. Accordingly, it is important to update these guidelines for monitoring autophagy in different organisms. Various reviews have described the range of assays that have been used for this purpose. Nevertheless, there continues to be confusion regarding acceptable methods to measure autophagy, especially in multicellular eukaryotes. A key point that needs to be emphasized is that there is a difference between measurements that monitor the numbers or volume of autophagic elements (e.g., autophagosomes or autolysosomes) at any stage of the autophagic process vs. those that measure flux through the autophagy pathway (i.e., the complete process); thus, a block in macroautophagy that results in autophagosome accumulation needs to be differentiated from stimuli that result in increased autophagic activity, defined as increased autophagy induction coupled with increased delivery to, and degradation within, lysosomes (in most higher eukaryotes and some protists such as Dictyostelium) or the vacuole (in plants and fungi). In other words, it is especially important that investigators new to the field understand that the appearance of more autophagosomes does not necessarily equate with more autophagy. In fact, in many cases, autophagosomes accumulate because of a block in trafficking to lysosomes without a concomitant change in autophagosome biogenesis, whereas an increase in autolysosomes may reflect a reduction in degradative activity. Here, we present a set of guidelines for the selection and interpretation of methods for use by investigators who aim to examine macroautophagy and related processes, as well as for reviewers who need to provide realistic and reasonable critiques of papers that are focused on these processes. These guidelines are not meant to be a formulaic set of rules, because the appropriate assays depend in part on the question being asked and the system being used. In addition, we emphasize that no individual assay is guaranteed to be the most appropriate one in every situation, and we strongly recommend the use of multiple assays to monitor autophagy. In these guidelines, we consider these various methods of assessing autophagy and what information can, or cannot, be obtained from them. Finally, by discussing the merits and limits of particular autophagy assays, we hope to encourage technical innovation in the field.

The Ubiquitin-Proteasome Proteolytic Pathway: Destruction for the Sake of Construction

Abstract: Between the 1960s and 1980s, most life scientists focused their attention on studies of nucleic acids and the translation of the coded information. Protein degradation was a neglected area, conside...

Speech enhancement using a minimum-mean square error short-time spectral amplitude estimator

Abstract: This paper focuses on the class of speech enhancement systems which capitalize on the major importance of the short-time spectral amplitude (STSA) of the speech signal in its perception. A system which utilizes a minimum mean-square error (MMSE) STSA estimator is proposed and then compared with other widely used systems which are based on Wiener filtering and the "spectral subtraction" algorithm. In this paper we derive the MMSE STSA estimator, based on modeling speech and noise spectral components as statistically independent Gaussian random variables. We analyze the performance of the proposed STSA estimator and compare it with a STSA estimator derived from the Wiener estimator. We also examine the MMSE STSA estimator under uncertainty of signal presence in the noisy observations. In constructing the enhanced signal, the MMSE STSA estimator is combined with the complex exponential of the noisy phase. It is shown here that the latter is the MMSE estimator of the complex exponential of the original phase, which does not affect the STSA estimation. The proposed approach results in a significant reduction of the noise, and provides enhanced speech with colorless residual noise. The complexity of the proposed algorithm is approximately that of other systems in the discussed class.

Compression of individual sequences via variable-rate coding

Abstract: Compressibility of individual sequences by the class of generalized finite-state information-lossless encoders is investigated. These encoders can operate in a variable-rate mode as well as a fixed-rate one, and they allow for any finite-state scheme of variable-length-to-variable-length coding. For every individual infinite sequence x a quantity \rho(x) is defined, called the compressibility of x , which is shown to be the asymptotically attainable lower bound on the compression ratio that can be achieved for x by any finite-state encoder. This is demonstrated by means of a constructive coding theorem and its converse that, apart from their asymptotic significance, also provide useful performance criteria for finite and practical data-compression tasks. The proposed concept of compressibility is also shown to play a role analogous to that of entropy in classical information theory where one deals with probabilistic ensembles of sequences rather than with individual sequences. While the definition of \rho(x) allows a different machine for each different sequence to be compressed, the constructive coding theorem leads to a universal algorithm that is asymptotically optimal for all sequences.