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CircSETD3 (Hsa_circ_0000567) acts as a sponge for microRNA-421 inhibiting hepatocellular carcinoma growth

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TLDR
CircSETD3 is a novel tumour suppressor of HCC and is a valuable prognostic biomarker that acts as a sponge for miR-421 and verified that mitogen-activated protein kinase (MAPK)14 is a Novel target of miR -421.
Abstract
Circular RNAs (circRNAs) play important roles in tumourigenesis and tumour progression. However, the expression profiles and functions of circRNAs in hepatocellular carcinoma (HCC) are largely unclear. The expression profiles of circRNAs in HCC were identified through microarray analysis and were validated through quantitative reverse transcription polymerase chain reaction (qRT-PCR). Survival curves were plotted using the Kaplan-Meier method and compared using the log-rank test. The circular structure of candidate circRNA was confirmed through Sanger sequencing, divergent primer PCR, and RNase R treatments. Proliferation of HCC cells was evaluated in vitro and in vivo. The microRNA (miRNA) sponge mechanism of circRNAs was demonstrated using dual-luciferase reporter and RNA immunoprecipitation assays. CircSETD3 (hsa_circRNA_0000567/hsa_circRNA_101436) was significantly downregulated in HCC tissues and cell lines. Low expression of circSETD3 in HCC tissues significantly predicted an unfavourable prognosis and was correlated with larger tumour size and poor differentiation of HCC in patients. In vitro experiments showed that circSETD3 inhibited the proliferation of HCC cells and induced G1/S arrest in HCC cells. In vivo studies revealed that circSETD3 was stably overexpressed in a xenograft mouse model and inhibited the growth of HCC. Furthermore, we demonstrated that circSETD3 acts as a sponge for miR-421 and verified that mitogen-activated protein kinase (MAPK)14 is a novel target of miR-421. CircSETD3 is a novel tumour suppressor of HCC and is a valuable prognostic biomarker. Moreover, circSETD3 inhibits the growth of HCC partly through the circSETD3/miR-421/MAPK14 pathway.

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Emerging role of tumor-related functional peptides encoded by lncRNA and circRNA

TL;DR: The aim of this review is to provide a theoretical basis and relevant references, which may promote the discovery of more functional peptides encoded by ncRNAs, and further develop novel anticancer therapeutic targets, as well as diagnostic and prognostic cancer markers.
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The circRNA circSEPT9 mediated by E2F1 and EIF4A3 facilitates the carcinogenesis and development of triple-negative breast cancer

TL;DR: Investigation of the expression pattern of circRNAs in four pairs of TNBC tissues and paracancerous normal tissues revealed that circSEPT9 could regulate the expression of Leukemia Inhibitory Factor (LIF) via sponging miR-637 and activate LIF/Stat3 signaling pathway involved in progression of T NBC.
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Emerging roles of circRNA in formation and progression of cancer.

TL;DR: In this review, not only the function and mechanism, but also the experimental methods of circRNA are summarized to help in the discovery of novel biomarkers, the therapeutic targets and their potential significance in diagnosis and treatment of diseases.
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The role of N 6 -methyladenosine (m 6 A) modification in the regulation of circRNAs

TL;DR: The role of m6A modification in the regulation and function of circRNAs is summarized and the potential applications and possible future directions in the field are discussed.
Journal ArticleDOI

Biological Roles and Mechanisms of Circular RNA in Human Cancers.

TL;DR: The major biological functions and clinical relevance of circRNAs, as well as expressions and regulatory mechanisms in various types of human cancer, including pathogenesis, mode of action, potential target, signaling regulatory pathways, drug resistance, and therapeutic biomarkers are described.
References
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A Pattern-Based Method for the Identification of MicroRNA Binding Sites and Their Corresponding Heteroduplexes

TL;DR: Rna22 as discussed by the authors identifies microRNA binding sites and their corresponding heteroduplexes, and then identifies the targeting microRNAs by finding putative microRN binding sites in the sequence of interest.
Journal ArticleDOI

Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis.

TL;DR: Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis and a potential target for drug discovery.
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Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites

TL;DR: In a large-scale evaluation, miRanda-mirSVR is competitive with other target prediction methods in identifying target genes and predicting the extent of their downregulation at the mRNA or protein levels.
Journal ArticleDOI

RNA integrity and the effect on the real-time qRT-PCR performance

TL;DR: In this review, the importance of RNA quality for the qRT-PCR was analyzed by determining the RNA quality of different bovine tissues and cell culture and on the basis of the derived results it can be argued that qRT -PCR performance is affected by the RNA integrity and PCR efficiency in general is not affected byThe RNA integrity.
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