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Open AccessJournal ArticleDOI

Guidelines for the use and interpretation of assays for monitoring cell death in higher eukaryotes

Lorenzo Galluzzi, +103 more
- 17 Apr 2009 - 
- Vol. 16, Iss: 8, pp 1093-1107
TLDR
A nonexhaustive comparison of methods to detect cell death with apoptotic or nonapoptotic morphologies, their advantages and pitfalls is provided and the importance of performing multiple, methodologically unrelated assays to quantify dying and dead cells is emphasized.
Abstract
Cell death is essential for a plethora of physiological processes, and its deregulation characterizes numerous human diseases Thus, the in-depth investigation of cell death and its mechanisms constitutes a formidable challenge for fundamental and applied biomedical research, and has tremendous implications for the development of novel therapeutic strategies It is, therefore, of utmost importance to standardize the experimental procedures that identify dying and dead cells in cell cultures and/or in tissues, from model organisms and/or humans, in healthy and/or pathological scenarios Thus far, dozens of methods have been proposed to quantify cell death-related parameters However, no guidelines exist regarding their use and interpretation, and nobody has thoroughly annotated the experimental settings for which each of these techniques is most appropriate Here, we provide a nonexhaustive comparison of methods to detect cell death with apoptotic or nonapoptotic morphologies, their advantages and pitfalls These guidelines are intended for investigators who study cell death, as well as for reviewers who need to constructively critique scientific reports that deal with cellular demise Given the difficulties in determining the exact number of cells that have passed the point-of-no-return of the signaling cascades leading to cell death, we emphasize the importance of performing multiple, methodologically unrelated assays to quantify dying and dead cells

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miR-29b is activated during neuronal maturation and targets BH3-only genes to restrict apoptosis

TL;DR: This work shows that a microRNA, miR-29b, is markedly induced with neuronal maturation and functions as a novel inhibitor of neuronal apoptosis, mediated by targeting genes in the proapoptotic BH3-only family.
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A TRP Channel Senses Lysosome Neutralization by Pathogens to Trigger Their Expulsion

TL;DR: A cellular default system for lysosome homeostasis that has been co-opted by the autonomous defense program to clear recalcitrant pathogens is revealed.
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AMPK activation protects cells from oxidative stress-induced senescence via autophagic flux restoration and intracellular NAD(+) elevation.

TL;DR: The results suggest that AMPK prevents oxidative stress‐induced senescence by improving autophagic flux and NAD+ homeostasis and provides a new insight for exploring the mechanisms of aging, autophagy and NAD+, and it is valuable in the development of innovative strategies to combat aging.
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An autophagy assay reveals the ESCRT-III component CHMP2A as a regulator of phagophore closure.

TL;DR: An autophagy assay is developed and a role for the endosomal sorting complexes required for transport component CHMP2A as a phagophore closure regulator is found and provides a useful tool for quantitative analysis of autophagosome biogenesis and maturation.
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Autophagy in neurodegenerative diseases: pathogenesis and therapy

TL;DR: Most recent research progress is summarized and a new perspective regarding autophagy regulation on the pathogenesis of neurodegenerative diseases is provided and the signaling molecules in Autophagy‐related pathways as therapeutic targets for the treatment of these diseases are discussed.
References
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Journal ArticleDOI

Identification of programmed cell death in situ via specific labeling of nuclear DNA fragmentation.

TL;DR: The extent of tissue-PCD revealed by this method is considerably greater than apoptosis detected by nuclear morphology, and thus opens the way for a variety of studies.
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The Release of Cytochrome c from Mitochondria: A Primary Site for Bcl-2 Regulation of Apoptosis

TL;DR: In a cell-free apoptosis system, mitochondria spontaneously released cytochrome c, which activated DEVD-specific caspases, leading to fodrin cleavage and apoptotic nuclear morphology, and Bcl-2 acts to inhibit cy tochrome c translocation, thereby blocking caspase activation and the apoptotic process.
Journal ArticleDOI

Glucocorticoid-induced thymocyte apoptosis is associated with endogenous endonuclease activation

A. H. Wyllie
- 10 Apr 1980 - 
TL;DR: It is shown here that this morphological change is closely associated with excision of nucleosome chains from nuclear chromatin, apparently through activation of an intracellular, but non-lysosomal, endonuclease.
Journal ArticleDOI

Molecular characterization of mitochondrial apoptosis-inducing factor

TL;DR: The identification and cloning of an apoptosis-inducing factor, AIF, which is sufficient to induce apoptosis of isolated nuclei is reported, indicating that AIF is a mitochondrial effector of apoptotic cell death.
Journal ArticleDOI

Mitochondrial Membrane Permeabilization in Cell Death

TL;DR: Once MMP has been induced, it causes the release of catabolic hydrolases and activators of such enzymes (including those of caspases) from mitochondria, meaning that mitochondria coordinate the late stage of cellular demise.
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