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Fabian Isensee

Researcher at German Cancer Research Center

Publications -  107
Citations -  10753

Fabian Isensee is an academic researcher from German Cancer Research Center. The author has contributed to research in topics: Computer science & Segmentation. The author has an hindex of 25, co-authored 72 publications receiving 4841 citations. Previous affiliations of Fabian Isensee include Heidelberg University.

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nnU-Net: a self-configuring method for deep learning-based biomedical image segmentation

TL;DR: nnU-Net as mentioned in this paper is a deep learning-based segmentation method that automatically configures itself, including preprocessing, network architecture, training and post-processing for any new task.
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The Image Biomarker Standardization Initiative: Standardized Quantitative Radiomics for High-Throughput Image-based Phenotyping

Alex Zwanenburg, +70 more
- 01 May 2020 - 
TL;DR: A set of 169 radiomics features was standardized, which enabled verification and calibration of different radiomics software and could be excellently reproduced.
Posted ContentDOI

Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge

Spyridon Bakas, +438 more
TL;DR: This study assesses the state-of-the-art machine learning methods used for brain tumor image analysis in mpMRI scans, during the last seven instances of the International Brain Tumor Segmentation (BraTS) challenge, i.e., 2012-2018, and investigates the challenge of identifying the best ML algorithms for each of these tasks.
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Deep Learning Techniques for Automatic MRI Cardiac Multi-Structures Segmentation and Diagnosis: Is the Problem Solved?

TL;DR: How far state-of-the-art deep learning methods can go at assessing CMRI, i.e., segmenting the myocardium and the two ventricles as well as classifying pathologies is measured, to open the door to highly accurate and fully automatic analysis of cardiac CMRI.
Posted Content

nnU-Net: Self-adapting Framework for U-Net-Based Medical Image Segmentation

TL;DR: The nnU-Net ('no-new-Net'), which refers to a robust and self-adapting framework on the basis of 2D and 3D vanilla U-Nets, is introduced and evaluated in the context of the Medical Segmentation Decathlon challenge.