M
Michael S. Barker
Researcher at University of Arizona
Publications - 102
Citations - 10063
Michael S. Barker is an academic researcher from University of Arizona. The author has contributed to research in topics: Genome & Genome evolution. The author has an hindex of 37, co-authored 99 publications receiving 7893 citations. Previous affiliations of Michael S. Barker include Chinese Academy of Sciences & Denison University.
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Journal ArticleDOI
The frequency of polyploid speciation in vascular plants
Troy E. Wood,Naoki Takebayashi,Michael S. Barker,Michael S. Barker,Itay Mayrose,Philip B. Greenspoon,Loren H. Rieseberg,Loren H. Rieseberg +7 more
TL;DR: It is established that 15% of angiosperm and 31% of fern speciation events are accompanied by ploidy increase, and frequency estimates are higher by a factor of four than earlier estimates and lead to a standing incidence of polyploid species within genera of 35% (n = 1,506).
Journal ArticleDOI
Phylotranscriptomic analysis of the origin and early diversification of land plants
Norman J. Wickett,Siavash Mirarab,Nam Nguyen,Tandy Warnow,Eric J. Carpenter,Naim Matasci,Saravanaraj Ayyampalayam,Michael S. Barker,J. Gordon Burleigh,Matthew A. Gitzendanner,Brad R. Ruhfel,Brad R. Ruhfel,Eric K. Wafula,Joshua P. Der,Sean W. Graham,Sarah Mathews,Michael Melkonian,Douglas E. Soltis,Douglas E. Soltis,Pamela S. Soltis,Pamela S. Soltis,Nicholas W. Miles,Carl J. Rothfels,Carl J. Rothfels,Lisa Pokorny,Lisa Pokorny,A. Jonathan Shaw,Lisa DeGironimo,Dennis W. Stevenson,Barbara Surek,Juan Carlos Villarreal,Béatrice Roure,Hervé Philippe,Hervé Philippe,Claude W. dePamphilis,Tao Chen,Michael K. Deyholos,Regina S. Baucom,Toni M. Kutchan,Megan M. Augustin,Jun Wang,Yong Zhang,Zhijian Tian,Zhixiang Yan,Xiaolei Wu,Xiao Sun,Gane Ka-Shu Wong,Jim Leebens-Mack +47 more
TL;DR: Strong and robust support is found for a sister-group relationship between land plants and one group of streptophyte green algae, the Zygnematophyceae, and suggests that phylogenetic hypotheses used to understand the evolution of fundamental plant traits should be reevaluated.
Journal ArticleDOI
A community-derived classification for extant lycophytes and ferns
Eric Schuettpelz,Harald Schneider,Alan R. Smith,Peter Hovenkamp,Jefferson Prado,Germinal Rouhan,Alexandre Salino,Michael A. Sundue,Thaís Elias Almeida,Barbara S. Parris,Emily B. Sessa,Ashley R. Field,André Luís de Gasper,Carl J. Rothfels,Michael D. Windham,Marcus Lehnert,Benjamin Dauphin,Atsushi Ebihara,Samuli Lehtonen,Pedro Bond Schwartsburd,Jordan S. Metzgar,Li-Bing Zhang,Li-Yaung Kuo,Patrick J. Brownsey,Masahiro Kato,Marcelo D. Arana,Francine Costa Assis,Michael S. Barker,David S. Barrington,Ho-Ming Chang,Yi-Han Chang,Yi-Shan Chao,Cheng-Wei Chen,De-Kui Chen,Wen-Liang Chiou,Vinícius Antonio de Oliveira Dittrich,Yi-Fan Duan,Jean-Yves Dubuisson,Donald R. Farrar,Susan Fawcett,Jose María Gabriel y Galán,Luiz Armando de Araújo Góes-Neto,Jason R. Grant,Amanda L. Grusz,Christopher H. Haufler,Warren D. Hauk,Hai He,Sabine Hennequin,Regina Y. Hirai,Layne Huiet,Michael Kessler,Petra Korall,Paulo H. Labiak,Anders Larsson,Blanca León,Chun-Xiang Li,Fay-Wei Li,Melanie A. Link-Pérez,Hong-Mei Liu,Ngan Thi Lu,Esteban I. Meza-Torres,Xin-Yuan Miao,Robbin C. Moran,Claudine M. Mynssen,Nathalie S. Nagalingum,Benjamin Øllgaard,Alison M. Paul,Jovani B. S. Pereira,Leon R. Perrie,M. Mónica Ponce,Tom A. Ranker,Christian Schulz,Wataru Shinohara,Alexander Shmakov,Erin M. Sigel,Filipe Soares de Souza,Lana da Silva Sylvestre,Weston Testo,Luz Amparo Triana-Moreno,Chie Tsutsumi,Hanna Tuomisto,Ivan A. Valdespino,Alejandra Vasco,Raquel Stauffer Viveros,Alan S. Weakley,Ran Wei,Stina Weststrand,Paul G. Wolf,George Yatskievych,Xiao-Gang Xu,Yue-Hong Yan,Liang Zhang,Xian-Chun Zhang,Xin-Mao Zhou +93 more
TL;DR: A modern, comprehensive classification for lycophytes and ferns, down to the genus level, utilizing a community‐based approach, that uses monophyly as the primary criterion for the recognition of taxa, but also aims to preserve existing taxa and circumscriptions that are both widely accepted and consistent with the understanding of pteridophyte phylogeny.
Journal ArticleDOI
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Jo Ann Banks,Tomoaki Nishiyama,Mitsuyasu Hasebe,Mitsuyasu Hasebe,John L. Bowman,John L. Bowman,Michael Gribskov,Claude W. dePamphilis,Victor A. Albert,Naoki Aono,Tsuyoshi Aoyama,Tsuyoshi Aoyama,Barbara A. Ambrose,Neil W. Ashton,Michael J. Axtell,Elizabeth I. Barker,Michael S. Barker,Jeffrey L. Bennetzen,Nicholas D. Bonawitz,Clint Chapple,Chaoyang Cheng,Luiz Gustavo Guedes Corrêa,Michael Dacre,Jeremy D. DeBarry,Ingo Dreyer,Marek Eliáš,Eric M. Engstrom,Mark Estelle,Liang Feng,Cédric Finet,Sandra K. Floyd,Wolf B. Frommer,Tomomichi Fujita,Lydia Gramzow,Michael Gutensohn,Michael Gutensohn,Jesper Harholt,Mitsuru Hattori,Mitsuru Hattori,Alexander Heyl,Tadayoshi Hirai,Yuji Hiwatashi,Yuji Hiwatashi,Masaki Ishikawa,Mineko Iwata,Kenneth G. Karol,Barbara Koehler,Uener Kolukisaoglu,Uener Kolukisaoglu,Minoru Kubo,Tetsuya Kurata,Sylvie Lalonde,Kejie Li,Ying Li,Ying Li,Amy Litt,Eric Lyons,Gerard Manning,Takeshi Maruyama,Todd P. Michael,Koji Mikami,Saori Miyazaki,Saori Miyazaki,Shin-Ichi Morinaga,Shin-Ichi Morinaga,TakashiMurata,TakashiMurata,Bernd Mueller-Roeber,David R. Nelson,Mari Obara,Yasuko Oguri,Richard G. Olmstead,Naoko T. Onodera,Bent O. Petersen,Birgit Pils,Michael J. Prigge,Stefan A. Rensing,Diego Mauricio Riaño-Pachón,Diego Mauricio Riaño-Pachón,Alison W. Roberts,Yoshikatsu Sato,Henrik Vibe Scheller,Henrik Vibe Scheller,Burkhard Schulz,Christian Schulz,Eugene V. Shakirov,Nakako Shibagaki,Naoki Shinohara,Dorothy E. Shippen,Iben Sørensen,Iben Sørensen,Ryo Sotooka,Nagisa Sugimoto,Mamoru Sugita,Naomi Sumikawa,Milos Tanurdzic,Günter Theißen,Peter Ulvskov,Sachiko Wakazuki,Jing-Ke Weng,Jing-Ke Weng,William G.T. Willats,Daniel Wipf,Paul G. Wolf,Lixing Yang,Andreas Zimmer,Qihui Zhu,Therese Mitros,Uffe Hellsten,Dominique Loqué,Robert Otillar,Asaf Salamov,Jeremy Schmutz,Harris Shapiro,Erika Lindquist,Susan Lucas,Daniel S. Rokhsar,Daniel S. Rokhsar,Igor V. Grigoriev +118 more
TL;DR: The genome sequence of the lycophyte Selaginella moellendorffii (Selaginella), the first nonseed vascular plant genome reported, is reported, finding that the transition from a gametophytes- to a sporophyte-dominated life cycle required far fewer new genes than the Transition from a non Seed vascular to a flowering plant.
Journal ArticleDOI
Data access for the 1,000 Plants (1KP) project.
Naim Matasci,Ling-Hong Hung,Zhixiang Yan,Eric J. Carpenter,Norman J. Wickett,Siavash Mirarab,Nam Nguyen,Tandy Warnow,Saravanaraj Ayyampalayam,Michael S. Barker,J. G. Burleigh,Matthew A. Gitzendanner,Eric K. Wafula,Joshua P. Der,Claude W. dePamphilis,Béatrice Roure,Hervé Philippe,Hervé Philippe,Brad R. Ruhfel,Brad R. Ruhfel,Nicholas W. Miles,Sean W. Graham,Sarah Mathews,Barbara Surek,Michael Melkonian,Douglas E. Soltis,Pamela S. Soltis,Carl J. Rothfels,Carl J. Rothfels,Lisa Pokorny,Lisa Pokorny,Jonathan Shaw,Lisa DeGironimo,Dennis W. Stevenson,Juan Carlos Villarreal,Tao Chen,Toni M. Kutchan,Megan Rolf,Regina S. Baucom,Michael K. Deyholos,Ram Samudrala,Zhijian Tian,Xiaolei Wu,Xiao Sun,Yong Zhang,Jun Wang,Jim Leebens-Mack,Gane Ka-Shu Wong,Gane Ka-Shu Wong +48 more
TL;DR: How to access the data used in a phylogenomics analysis of the first 85 species, and how to visualize the gene and species trees of the 1KP project.