S
Shona Allen
Researcher at University of California, Berkeley
Publications - 4
Citations - 202
Shona Allen is an academic researcher from University of California, Berkeley. The author has contributed to research in topics: Internal medicine & Medicine. The author has an hindex of 2, co-authored 2 publications receiving 29 citations.
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Posted ContentDOI
A multimodal cell census and atlas of the mammalian primary motor cortex
Ricky S. Adkins,Andrew Aldridge,Shona Allen,Seth A. Ament,Xu An,Ethan J. Armand,Giorgio A. Ascoli,Trygve E. Bakken,Anita Bandrowski,Samik Banerjee,Nikolaos Barkas,Anna Bartlett,Helen S. Bateup,M. Margarita Behrens,Philipp Berens,Jim Berg,Matteo Bernabucci,Yves Bernaerts,Darren Bertagnolli,Tommaso Biancalani,Lara Boggeman,Sina Booeshaghi,Ian Bowman,Héctor Corrada Bravo,Cathryn R. Cadwell,Edward M. Callaway,Benjamin Carlin,Carolyn O’Connor,Robert A. Carter,Tamara Casper,Rosa Castanon,Jesus Ramon Castro,Rebecca K. Chance,Apaala Chatterjee,Huaming Chen,Jerold Chun,Carlo Colantuoni,Jonathan Crabtree,Heather Huot Creasy,Kirsten Crichton,Megan Crow,Florence D’Orazi,Tanya L. Daigle,Rachel A. Dalley,Nick Dee,Kylee Degatano,Benjamin Dichter,Dinh Diep,Liya Ding,Songlin Ding,Bertha Dominguez,Hong-Wei Dong,Weixiu Dong,Elizabeth L. Dougherty,Sandrine Dudoit,Joseph R. Ecker,Stephen W. Eichhorn,Rongxin Fang,Victor Felix,Guoping Feng,Zhao Feng,Stephan Fischer,Conor Fitzpatrick,Olivia Fong,Nicholas N. Foster,William Galbavy,James C. Gee,Satrajit S. Ghosh,Michelle G. Giglio,Thomas R. Gillespie,Jesse Gillis,Melissa Goldman,Jeff Goldy,Hui Gong,Lin Gou,Michael Grauer,Yaroslav O. Halchenko,Julie M. Harris,Leonard Hartmanis,Joshua T. Hatfield,Michael Hawrylycz,Brian Helba,Brian R. Herb,Ronna Hertzano,Houri Hintiryan,Karla E. Hirokawa,Dirk Hockemeyer,Rebecca D. Hodge,Greg Hood,Gregory D. Horwitz,Xiaomeng Hou,Lijuan Hu,Qiwen Hu,Josh Huang,Bing-Xing Huo,Tony Ito-Cole,Matthew W. Jacobs,Xueyan Jia,Shengdian Jiang,Tao Jiang,Xiaolong Jiang,Xin Jin,Nikolas L. Jorstad,Brian E. Kalmbach,Jayaram Kancherla,C. Dirk Keene,Kathleen Kelly,Farzaneh Khajouei,Peter V. Kharchenko,Gukhan Kim,Andrew L. Ko,Dmitry Kobak,Kishori Konwar,Daniel J. Kramer,Fenna M. Krienen,Matthew Kroll,Xiuli Kuang,Hsien-Chi Kuo,Rachael Larsen,Kanan Lathia,Sophie Laturnus,Angus Y. Lee,Cheng-Ta Lee,Kuo-Fen Lee,Ed S. Lein,Phil Lesnar,Anan Li,Xiangning Li,Xu Li,Yang Eric Li,Yaoyao Li,Yuanyuan Li,Byung Kook Lim,Sten Linnarsson,Christine S. Liu,Hanqing Liu,Lijuan Liu,Jacinta Lucero,Chongyuan Luo,Qingming Luo,Evan Z. Macosko,Anup Mahurkar,Maryann E. Martone,Katherine Matho,Steven A. McCarroll,Carrie McCracken,Delissa McMillen,Elanine Miranda,Partha P. Mitra,Paula Assakura Miyazaki,Judith Mizrachi,Stephanie Mok,Eran A. Mukamel,Shalaka Mulherkar,Naeem Nadaf,Maitham Naeemi,Arun Narasimhan,Joseph R. Nery,Lydia Ng,John Ngai,Thuc Nghi Nguyen,Lance Nickel,Philip R. Nicovich,Sheng-Yong Niu,Vasilis Ntranos,Michael Nunn,Dustin Olley,Joshua Orvis,Julia K. Osteen,Pavel Osten,Scott F. Owen,Lior Pachter,Ramesh Palaniswamy,C. Palmer,Yan Pang,Hanchuan Peng,Thanh Pham,Antonio Pinto-Duarte,Nongluk Plongthongkum,Olivier Poirion,Sebastian Preissl,Elizabeth Purdom,Lei Qu,Mohammad S. Rashid,Nora Reed,Aviv Regev,Bing Ren,Miao Ren,Christine Rimorin,Davide Risso,Angeline Rivkin,Rodrigo Muñoz-Castañeda,William J. Romanow,Alexander J. Ropelewski,Hector Roux de Bézieux,Zongcai Ruan,Rickard Sandberg,Steven Savoia,Federico Scala,Michael Schor,Elise Shen,Kimberly Siletti,Jared B. Smith,Kimberly A. Smith,Saroja Somasundaram,Yuanyuan Song,Staci A. Sorensen,David A. Stafford,Kelly Street,Josef Sulc,Susan M. Sunkin,Valentine Svensson,Pengcheng Tan,Zheng Huan Tan,Bosiljka Tasic,Carol L. Thompson,Wei Tian,Timothy L. Tickle,Michael Tieu,Jonathan T. Ting,Andreas S. Tolias,Amy Torkelson,Herman Tung,Eeshit Dhaval Vaishnav,Koen Van den Berge,Cindy T. J. van Velthoven,Charles R. Vanderburg,Matthew B. Veldman,Minh Vu,Wayne Wakeman,Peng Wang,Quanxin Wang,Xinxin Wang,Yimin Wang,Yun Wang,Joshua D. Welch,Owen White,Elora W Williams,Fangming Xie,Peng Xie,Feng Xiong,William Yang,Anna Marie Yanny,Zizhen Yao,Lulu Yin,Yang Yu,Jing Yuan,Hongkui Z +247 more
TL;DR: This study reveals a unified molecular genetic landscape of cortical cell types that congruently integrates their transcriptome, open chromatin and DNA methylation maps, and establishes a unified and mechanistic framework of neuronal cell type organization that integrates multi-layered molecular genetic and spatial information with multi-faceted phenotypic properties.
Journal ArticleDOI
Regional variability and genotypic and pharmacodynamic effects on PrP concentration in the CNS
M. A. Mortberg,Hien T Zhao,Andrew G. Reidenbach,Juliana E. Gentile,Eric Kuhn,Jill O'Moore,Patrick M. Dooley,Theresa R. Connors,Curt Mazur,Shona Allen,Bianca A. Trombetta,Alison J. McManus,Matthew Moore,Jiewu Liu,Deborah E. Cabin,Holly B. Kordasiewicz,Joel Mathews,Steven E. Arnold,Sonia M Vallabh,Eric Vallabh Minikel +19 more
TL;DR: The findings support the use of CSF PrP as a pharmacodynamic biomarker for PrP-lowering drugs and suggest that relative reduction from individual baseline CSFPrP concentration may be an appropriate marker for target engagement.
Posted ContentDOI
A multimodal cell census and atlas of the mammalian primary motor cortex
Ricky S. Adkins,Andrew Aldridge,Shona Allen,Seth A. Ament,Xu An,Ethan J. Armand,Giorgio A. Ascoli,Giorgio A. Ascoli,Trygve E. Bakken,Anita Bandrowski,Samik Banerjee,Nikolaos Barkas,Anna Bartlett,Helen S. Bateup,Helen S. Bateup,M. Margarita Behrens,Philipp Berens,Jim Berg,Matteo Bernabucci,Yves Bernaerts,Darren Bertagnolli,Tommaso Biancalani,Lara Boggeman,A. Sina Booeshaghi,Ian Bowman,Héctor Corrada Bravo,Cathryn R. Cadwell,Edward M. Callaway,Benjamin Carlin,Carolyn O’Connor,Robert L. Carter,Tamara Casper,Rosa Castanon,Jesus Ramon Castro,Rebecca K. Chance,Apaala Chatterjee,Huaming Chen,Jerold Chun,Carlo Colantuoni,Carlo Colantuoni,Jonathan Crabtree,Heather Huot Creasy,Kirsten Crichton,Megan Crow,Florence D’Orazi,Tanya L. Daigle,Rachel A. Dalley,Nick Dee,Kylee Degatano,Benjamin Dichter,Dinh Diep,Liya Ding,Songlin Ding,Bertha Dominguez,Hong-Wei Dong,Weixiu Dong,Elizabeth L. Dougherty,Sandrine Dudoit,Joseph R. Ecker,Stephen W. Eichhorn,Rongxin Fang,Victor Felix,Guoping Feng,Zhao Feng,Stephan Fischer,Conor Fitzpatrick,Olivia Fong,Nicholas N. Foster,William Galbavy,James C. Gee,Satrajit S. Ghosh,Michelle G. Giglio,Tom Gillespie,Jesse Gillis,Melissa Goldman,Jeff Goldy,Hui Gong,Lin Gou,Michael Grauer,Yaroslav O. Halchenko,Julie A. Harris,Leonard Hartmanis,Joshua T. Hatfield,Michael Hawrylycz,Brian Helba,Brian R. Herb,Ronna Hertzano,Houri Hintiryan,Karla E. Hirokawa,Dirk Hockemeyer,Rebecca D. Hodge,Greg Hood,Gregory D. Horwitz,Xiaomeng Hou,Lijuan Hu,Qiwen Hu,Z. Josh Huang,Bing-Xing Huo,Tony Ito-Cole,Matthew W. Jacobs,Xueyan Jia,Shengdian Jiang,Tao Jiang,Xiaolong Jiang,Xin Jin,Nikolas L. Jorstad,Brian E. Kalmbach,Jayaram Kancherla,C. Dirk Keene,Kathleen Kelly,Farzaneh Khajouei,Peter V. Kharchenko,Gukhan Kim,Andrew L. Ko,Andrew L. Ko,Dmitry Kobak,Kishori Konwar,Daniel J. Kramer,Fenna M. Krienen,Matthew Kroll,Xiuli Kuang,Hsien-Chi Kuo,Blue B. Lake,Rachael Larsen,Kanan Lathia,Sophie Laturnus,Angus Y. Lee,Cheng-Ta Lee,Kuo-Fen Lee,Ed S. Lein,Phil Lesnar,Anan Li,Xiangning Li,Xu Li,Yang Eric Li,Yaoyao Li,Yuanyuan Li,Byung Kook Lim,Sten Linnarsson,Christine S. Liu,Hanqing Liu,Lijuan Liu,Jacinta Lucero,Chongyuan Luo,Qingming Luo,Evan Z. Macosko,Anup Mahurkar,Maryann E. Martone,Katherine Matho,Steven A. McCarroll,Steven A. McCarroll,Carrie McCracken,Delissa McMillen,Elanine Miranda,Partha P. Mitra,Paula Assakura Miyazaki,Judith Mizrachi,Stephanie Mok,Eran A. Mukamel,Shalaka Mulherkar,Naeem Nadaf,Maitham Naeemi,Arun Narasimhan,Joseph R. Nery,Lydia Ng,John Ngai,John Ngai,Thuc Nghi Nguyen,Lance Nickel,Philip R. Nicovich,Sheng-Yong Niu,Vasilis Ntranos,Michael Nunn,Dustin Olley,Joshua Orvis,Julia K. Osteen,Pavel Osten,Scott F. Owen,Lior Pachter,Ramesh Palaniswamy,C. Palmer,Yan Pang,Hanchuan Peng,Thanh Pham,Antonio Pinto-Duarte,Nongluk Plongthongkum,Olivier Poirion,Sebastian Preissl,Elizabeth Purdom,Lei Qu,Mohammad S. Rashid,Nora Reed,Aviv Regev,Aviv Regev,Bing Ren,Bing Ren,Miao Ren,Christine Rimorin,Davide Risso,Angeline Rivkin,Rodrigo Muñoz-Castañeda,William J. Romanow,Alexander J. Ropelewski,Hector Roux de Bézieux,Zongcai Ruan,Rickard Sandberg,Steven Savoia,Federico Scala,Michael Schor,Elise Shen,Kimberly Siletti,Jared B. Smith,Kimberly A. Smith,Saroja Somasundaram,Yuanyuan Song,Staci A. Sorensen,David A. Stafford,Kelly Street,Josef Sulc,Susan M. Sunkin,Valentine Svensson,Pengcheng Tan,Pengcheng Tan,Zheng Huan Tan,Bosiljka Tasic,Carol L. Thompson,Wei Tian,Timothy L. Tickle,Michael Tieu,Jonathan T. Ting,Andreas S. Tolias,Amy Torkelson,Herman Tung,Eeshit Dhaval Vaishnav,Koen Van den Berge,Koen Van den Berge,Cindy T. J. van Velthoven,Charles R. Vanderburg,Matthew B. Veldman,Matthew B. Veldman,Minh Vu,Wayne Wakeman,Peng Wang,Quanxin Wang,Xinxin Wang,Yimin Wang,Yun Wang,Joshua D. Welch,Owen White,Elora W Williams,Fangming Xie,Peng Xie,Feng Xiong,X. William Yang,X. William Yang,Anna Marie Yanny,Zizhen Yao,Lulu Yin,Yang Yu,Jing Yuan,Hongkui Zeng,Kun Zhang,Meng Zhang,Zhuzhu Zhang,Sujun Zhao,Xuan Zhao,Jingtian Zhou,Jingtian Zhou,Xiaowei Zhuang,Brian Zingg +269 more
TL;DR: In this article, the authors report the generation of a multimodal cell census and atlas of the mammalian primary motor cortex (MOp or M1) as the initial product of the BRAIN Initiative Cell Census Network (BICCN).
Journal ArticleDOI
Evaluating the biological variability of blood‐based biomarkers for use in clinical trials
Bianca A. Trombetta,Shona Allen,Leena El-Mufti,Misha M. Riley,Christopher E. Ramirez,Molly Weik,Becky C. Carlyle,Pia Kivisäkk,Steven E. Arnold +8 more
TL;DR: In this paper , the authors evaluated biomarker performance in plasma and identified the most reliable candidates for clinical trials for Alzheimer's Disease (AD) diagnosis. But, the day-to-day variability of these measures must be robustly characterized to determine which blood-based biomarkers would be the most sensitive for detecting treatment-related responses.