Woods Hole Oceanographic Institution

About: Woods Hole Oceanographic Institution is a nonprofit organization based out in Falmouth, Massachusetts, United States. It is known for research contribution in the topics: Population & Mantle (geology). The organization has 5685 authors who have published 18396 publications receiving 1202050 citations. The organization is also known as: WHOI.

Seasonal oscillations in water exchange between aquifers and the coastal ocean

Abstract: Ground water of both terrestrial and marine origin flows into coastal surface waters as submarine groundwater discharge, and constitutes an important source of nutrients, contaminants and trace elements to the coastal ocean1,2,3,4,5. Large saline discharges have been observed by direct measurements3,6,7,8,9,10 and inferred from geochemical tracers11,12,13, but sufficient seawater inflow has not been observed to balance this outflow. Geochemical tracers also suggest a time lag between changes in submarine groundwater discharge rates12,14 and the seasonal oscillations of inland recharge that drive groundwater flow towards the coast. Here we use measurements of hydraulic gradients and offshore fluxes taken at Waquoit Bay, Massachusetts, together with a modelling study of a generalized coastal groundwater system to show that a shift in the freshwater–saltwater interface—controlled by seasonal changes in water table elevation—can explain large saline discharges that lag inland recharge cycles. We find that sea water is drawn into aquifers as the freshwater–saltwater interface moves landward during winter, and discharges back into coastal waters as the interface moves seaward in summer. Our results demonstrate the connection between the seasonal hydrologic cycle inland and the saline groundwater system in coastal aquifers, and suggest a potentially important seasonality in the chemical loading of coastal waters.

Intact polar membrane lipids in prokaryotes and sediments deciphered by high-performance liquid chromatography/electrospray ionization multistage mass spectrometry--new biomarkers for biogeochemistry and microbial ecology.

Abstract: Lipids from prokaryotic cell membranes can serve as sources of information on the biogeochemistry and microbial ecology of natural ecosystems. Traditionally, apolar derivatives of the intact polar membrane molecules, e.g., fatty acids, have been the major target of lipid-based biogeochemical studies. However, when still intact, i.e., as glycerol esters and ethers with attached polar headgroups, membrane lipids are diagnostic for living prokaryotes, which makes them excellent biomarkers for the study of in situ microbial processes in geological systems such as sediments or soils. Intact polar lipids (IPLs) are attractive analytical targets because they are taxonomically more specific than their apolar derivatives and avoid exclusion of signals from prokaryotes that primarily build their membranes with ether-bound lipids such as archaea and some bacteria. Here we report results from analyses of IPLs in pure cultures of biogeochemically relevant prokaryotes and marine sediments by high-performance liquid chromatography/electrospray ionization ion-trap mass spectrometry (HPLC/ESI-IT-MSn). This technique is suitable for screening of biomass and environmental samples for distinctive taxonomic structural features such as distribution of polar lipid headgroups, types of bonds between alkyl moiety and glycerol backbone, and the chain length and degree of unsaturation in the alkyl moieties. We present analytical protocols to decipher structural information from mass spectral data. The IPL contents in selected archaeal and bacterial species are diverse and qualify as molecular fingerprints. Applied to marine sediments, the approach provided detailed information on the dominant microbial groups. The IPLs from bacterial members of anaerobic methanotrophic communities in surface sediments at Hydrate Ridge resemble those found in Desulfosarcina variabilis. The presence of dietherglycerophospholipids, however, suggests the presence of other bacteria possibly affiliated with the deepest phylogenetic branches in the tree of life. Sediments from approximately 90 m below the seafloor on the Peruvian continental margin are dominated by intact archaeal tetraethers with glycosidically bound hexoses as headgroups, consistent with a significant fraction of the community being archaea. Additional calditol-based tetraethers imply that the sedimentary archaea are taxonomically linked to the crenarchaeal Sulfolobales.

Specification of eddy transfer coefficients in coarse resolution ocean circulation models

Abstract: Parametric representations of oceanic geostrophic eddy transfer of heat and salt are studied ranging from horizontal diffusion to the more physically based approaches of Green and Stone (GS) and Gent and McWilliams (GM). The authors argue for a representation that combines the best aspects of GS and GM: transfer coefficients that vary in space and time in a manner that depends on the large-scale density fields (GS) and adoption of a transformed Eulerian mean formalism (GM). Recommendations are based upon a two-dimensional (zonally or azimuthally averaged) model with parameterized horizontal and vertical fluxes that is compared to three-dimensional numerical calculations in which the eddy transfer is resolved. Three different scenarios are considered: 1) a convective ‘‘chimney’’ where the baroclinic zone is created by differential surface cooling; 2) spindown of a frontal zone due to baroclinic eddies; and 3) a wind-driven, baroclinically unstable channel. Guided by baroclinic instability theory and calibrated against eddy-resolving calculations, the authors recommend a form for the horizontal transfer coefficient given by 2 fM 2 2 k 5 a l 5 a l, N ˇRi where Ri 5 f2N2/M4 is the large-scale Richardson number and f is the Coriolis parameter; M2 and N2 are measures of the horizontal and vertical stratification of the large-scale flow, l measures the width of the baroclinic zone, and a is a constant of proportionality. In the very different scenarios studied here the authors find a to be a ‘‘universal’’ constant equal to 0.015, not dissimilar to that found by Green for geostrophic eddies in the atmosphere. The magnitude of the implied k, however, varies from 300 m2 s21 in the chimney to 2000 m2 s21 in the wind-driven channel.

Drag reduction in fish-like locomotion

Abstract: We present experimental force and power measurements demonstrating that the power required to propel an actively swimming, streamlined, fish-like body is significantly smaller than the power needed to tow the body straight and rigid at the same speed U. The data have been obtained through accurate force and motion measurements on a laboratory fish-like robotic mechanism, 1.2 m long, covered with a flexible skin and equipped with a tail fin, at Reynolds numbers up to 106, with turbulence stimulation. The lateral motion of the body is in the form of a travelling wave with wavelength λ and varying amplitude along the length, smoothly increasing from the front to the tail end. A parametric investigation shows sensitivity of drag reduction to the non-dimensional frequency (Strouhal number), amplitude of body oscillation and wavelength λ, and angle of attack and phase angle of the tail fin. A necessary condition for drag reduction is that the phase speed of the body wave be greater than the forward speed U. Power estimates using an inviscid numerical scheme compare favourably with the experimental data. The method employs a boundary-integral method for arbitrary flexible body geometry and motions, while the wake shed from the fish-like form is modelled by an evolving desingularized dipole sheet.