R
Rob Knight
Researcher at University of California, San Diego
Publications - 1188
Citations - 322479
Rob Knight is an academic researcher from University of California, San Diego. The author has contributed to research in topics: Microbiome & Biology. The author has an hindex of 201, co-authored 1061 publications receiving 253207 citations. Previous affiliations of Rob Knight include Anschutz Medical Campus & University of Sydney.
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tRNA Creation by Hairpin Duplication
TL;DR: It is found that actual tRNAs have significantly more matches between the two halves than do random sequences that can form the tRNA structure, and the hypothesis that the modern tRNA cloverleaf arose from a single hairpin duplication prior to the divergence of modern t RNA specificities and the three domains of life is supported.
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Walls talk: Microbial biogeography of homes spanning urbanization
Jean F. Ruiz-Calderon,Humberto Cavallin,Se Jin Song,Atila Novoselac,Luis R. Pericchi,Jean N. Hernandez,Rafael Rios,OraLee H. Branch,Henrique dos Santos Pereira,Luciana C. Paulino,Martin J. Blaser,Rob Knight,Maria Gloria Dominguez-Bello +12 more
TL;DR: This study addresses the associations between architectural design and the microbial biogeography of households across a gradient of urbanization in South America and found urbanized spaces uniquely increase the content of human-associated microbes and decrease exposure to the environmental microbes with which humans have coevolved.
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Species abundance information improves sequence taxonomy classification accuracy
Benjamin D. Kaehler,Benjamin D. Kaehler,Nicholas A. Bokulich,Daniel McDonald,Rob Knight,J. Gregory Caporaso,Gavin A. Huttley +6 more
TL;DR: The findings indicate that for most practical purposes, the assumption that reference species are equally likely to be observed is untenable, and q2-clawback provides a straightforward alternative for samples from common environments.
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The Ecology of Microbial Communities Associated with Macrocystis pyrifera.
Vanessa K. Michelou,J. Gregory Caporaso,J. Gregory Caporaso,Rob Knight,Rob Knight,Stephen R. Palumbi +5 more
TL;DR: The results suggest that M. pyrifera-dominated kelp forests harbor distinct microbial communities that vary temporally, and several kelp-specific taxa were highly similar to other bacteria known to either prevent the colonization of eukaryotic larvae or exhibit antibacterial activities.
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Dramatic Differences in Gut Bacterial Densities Correlate with Diet and Habitat in Rainforest Ants
Jon G. Sanders,Piotr Lukasik,Megan E. Frederickson,Jacob A. Russell,Ryuichi Koga,Rob Knight,Naomi E. Pierce +6 more
TL;DR: Supporting the hypothesis that microbial symbiosis is important to dominance in the canopy, it is found that the abundance of gut bacteria is positively correlated with stable isotope proxies of herbivory among canopy-dwelling ants, but not among ground-d Dwelling ants.