Showing papers by "Macquarie University published in 2010"

Introduction to Conservation Genetics

Abstract: This impressive author team brings the wealth of advances in conservation genetics into the new edition of this introductory text, including new chapters on population genomics and genetic issues in introduced and invasive species. They continue the strong learning features for students - main points in the margin, chapter summaries, vital support with the mathematics, and further reading - and now guide the reader to software and databases. Many new references reflect the expansion of this field. With examples from mammals, birds, reptiles, fish, amphibians, plants and invertebrates, this is an ideal introduction to conservation genetics for a broad audience. The text tackles the quantitative aspects of conservation genetics, and has a host of pedagogy to support students learning the numerical side of the subject. Combined with being up-to-date, its user-friendly writing style and first-class illustration programme forms a robust teaching package.

Niche conservatism as an emerging principle in ecology and conservation biology.

Abstract: The diversity of life is ultimately generated by evolution, and much attention has focused on the rapid evolution of ecological traits. Yet, the tendency for many ecological traits to instead remain similar over time [niche conservatism (NC)] has many consequences for the fundamental patterns and processes studied in ecology and conservation biology. Here, we describe the mounting evidence for the importance of NC to major topics in ecology (e.g. species richness, ecosystem function) and conservation (e.g. climate change, invasive species). We also review other areas where it may be important but has generally been overlooked, in both ecology (e.g. food webs, disease ecology, mutualistic interactions) and conservation (e.g. habitat modification). We summarize methods for testing for NC, and suggest that a commonly used and advocated method (involving a test for phylogenetic signal) is potentially problematic, and describe alternative approaches. We suggest that considering NC: (1) focuses attention on the within-species processes that cause traits to be conserved over time, (2) emphasizes connections between questions and research areas that are not obviously related (e.g. invasives, global warming, tropical richness), and (3) suggests new areas for research (e.g. why are some clades largely nocturnal? why do related species share diseases?).

Functional traits and the growth–mortality trade-off in tropical trees

Abstract: A trade-off between growth and mortality rates characterizes tree species in closed canopy forests. This trade-off is maintained by inherent differences among species and spatial variation in light availability caused by canopy-opening disturbances. We evaluated conditions under which the trade-off is expressed and relationships with four key functional traits for 103 tree species from Barro Colorado Island, Panama. The trade-off is strongest for saplings for growth rates of the fastest growing individuals and mortality rates of the slowest growing individuals (r 2 ¼ 0.69), intermediate for saplings for average growth rates and overall mortality rates (r 2 ¼ 0.46), and much weaker for large trees (r 2 � 0.10). This parallels likely levels of spatial variation in light availability, which is greatest for fast- vs. slow-growing saplings and least for large trees with foliage in the forest canopy. Inherent attributes of species contributing to the trade-off include abilities to disperse, acquire resources, grow rapidly, and tolerate shade and other stresses. There is growing interest in the possibility that functional traits might provide insight into such ecological differences and a growing consensus that seed mass (SM), leaf mass per area (LMA), wood density (WD), and maximum height (Hmax) are key traits among forest trees. Seed mass, LMA, WD, and Hmax are predicted to be small for light-demanding species with rapid growth and mortality and large for shade-tolerant species with slow growth and mortality. Six of these trait-demographic rate predictions were realized for saplings; however, with the exception of WD, the relationships were weak (r 2 , 0.1 for three and r 2 , 0.2 for five of the six remaining relationships). The four traits together explained 43-44% of interspecific variation in species positions on the growth-mortality trade-off; however, WD alone accounted for .80% of the explained variation and, after WD was included, LMA and Hmax made insignificant contributions. Virtually the full range of values of SM, LMA, and Hmax occurred at all positions on the growth-mortality trade-off. Although WD provides a promising start, a successful trait- based ecology of tropical forest trees will require consideration of additional traits.

Ties that bind : correlates of adolescents' civic commitments in seven countries

Abstract: The relationship of voluntary work, school climates, and family values to public interest as a life goal of adolescents is presented for a sample of 5,579 12–18 year olds in three stable and four transitional democracies. In five of the seven countries, females were more likely than males to be engaged in voluntary work, and in all seven countries girls were more likely than boys to report that their families encouraged an ethic of social responsibility. Regardless of gender or country, adolescents were more likely to consider public interest an important life goal when their families emphasized an ethic of social responsibility. In addition, engagement in volunteer work and a sense of student solidarity at school were formative components of public interest as a life goal for youth in some but not all countries.

The Attractive Female Body Weight and Female Body Dissatisfaction in 26 Countries Across 10 World Regions: Results of the International Body Project I

Abstract: This study reports results from the first International Body Project (IBP-I), which surveyed 7,434 individuals in 10 major world regions about body weight ideals and body dissatisfaction. Participants completed the female Contour Drawing Figure Rating Scale (CDFRS) and self-reported their exposure to Western and local media. Results indicated there were significant cross-regional differences in the ideal female figure and body dissatisfaction, but effect sizes were small across high-socioeconomic-status (SES) sites. Within cultures, heavier bodies were preferred in low-SES sites compared to high-SES sites in Malaysia and South Africa (ds = 1.94-2.49) but not in Austria. Participant age, body mass index (BMI), and Western media exposure predicted body weight ideals. BMI and Western media exposure predicted body dissatisfaction among women. Our results show that body dissatisfaction and desire for thinness is commonplace in high-SES settings across world regions, highlighting the need for international attention to this problem.

Terrestrial biogeochemical feedbacks in the climate system

Abstract: The terrestrial biosphere is a key regulator of atmospheric chemistry and climate. Total positive radiative forcing resulting from biogeochemical feedbacks between the terrestrial biosphere and atmosphere could be equally as important as that resulting from physical feedbacks. The terrestrial biosphere is a key regulator of atmospheric chemistry and climate. During past periods of climate change, vegetation cover and interactions between the terrestrial biosphere and atmosphere changed within decades. Modern observations show a similar responsiveness of terrestrial biogeochemistry to anthropogenically forced climate change and air pollution. Although interactions between the carbon cycle and climate have been a central focus, other biogeochemical feedbacks could be as important in modulating future climate change. Total positive radiative forcings resulting from feedbacks between the terrestrial biosphere and the atmosphere are estimated to reach up to 0.9 or 1.5 W m−2 K−1 towards the end of the twenty-first century, depending on the extent to which interactions with the nitrogen cycle stimulate or limit carbon sequestration. This substantially reduces and potentially even eliminates the cooling effect owing to carbon dioxide fertilization of the terrestrial biota. The overall magnitude of the biogeochemical feedbacks could potentially be similar to that of feedbacks in the physical climate system, but there are large uncertainties in the magnitude of individual estimates and in accounting for synergies between these effects.

An Initial Evaluation of the Functions of Human Olfaction

Abstract: Although referred to in passing in several places, there have been few attempts to specify the functions of the human olfactory system. This article presents an initial effort at identifying and categorizing these functions, using 3 sources of information as a guide: 1) losses experienced by anosmic participants; 2) olfactory function in other mammals; and 3) capacity, namely, whether the human olfactory system can support the suggested function and whether there is evidence that it does. Three major classes of function were identified, relating to Ingestion (Detection/identification prior to ingestion; Detection of expectancy violations; Appetite regulation; Breast orientation and feeding), Avoiding environmental hazards (Fear related; Disgust related), and Social communication (Reproductive [inbreeding avoidance, fitness detection in prospective mates]; Emotional contagion [fear contagion, stress buffering]). These suggested functions were then examined with respect to 1) issues of ecological validity in human olfactory research; 2) their impact on olfactory loss; and 3) their general and specific implications for the study of human olfaction.

Quantum register based on coupled electron spins in a room-temperature solid.

Abstract: Nitrogen–vacancy centres in diamond have emerged as a promising platform for quantum information processing at room temperature. Now, coherent coupling between two electron spins separated by almost 10 nm has been demonstrated. At this distance, the spins can be addressed individually, which might enable the construction of a network of connected quantum registers.

Observation and control of blinking nitrogen-vacancy centres in discrete nanodiamonds

Abstract: Nitrogen-vacancy colour centres in diamond can undergo strong, spin-sensitive optical transitions under ambient conditions, which makes them attractive for applications in quantum optics, nanoscale magnetometry and biolabelling. Although nitrogen-vacancy centres have been observed in aggregated detonation nanodiamonds and milled nanodiamonds, they have not been observed in very small isolated nanodiamonds. Here, we report the first direct observation of nitrogen-vacancy centres in discrete 5-nm nanodiamonds at room temperature, including evidence for intermittency in the luminescence (blinking) from the nanodiamonds. We also show that it is possible to control this blinking by modifying the surface of the nanodiamonds.

Human face recognition ability is specific and highly heritable

Abstract: Compared with notable successes in the genetics of basic sensory transduction, progress on the genetics of higher level perception and cognition has been limited. We propose that investigating specific cognitive abilities with well-defined neural substrates, such as face recognition, may yield additional insights. In a twin study of face recognition, we found that the correlation of scores between monozygotic twins (0.70) was more than double the dizygotic twin correlation (0.29), evidence for a high genetic contribution to face recognition ability. Low correlations between face recognition scores and visual and verbal recognition scores indicate that both face recognition ability itself and its genetic basis are largely attributable to face-specific mechanisms. The present results therefore identify an unusual phenomenon: a highly specific cognitive ability that is highly heritable. Our results establish a clear genetic basis for face recognition, opening this intensively studied and socially advantageous cognitive trait to genetic investigation.

A Red-Shifted Chlorophyll

Abstract: Chlorophylls are essential for light-harvesting and energy transduction in photosynthesis. Four chemically distinct varieties have been known for the past 60 years. Here we report isolation of a fifth, which we designate chlorophyll f. Its in vitro absorption (706 nanometers) and fluorescence (722 nanometers) maxima are red-shifted compared to all other chlorophylls from oxygenic phototrophs. On the basis of the optical, mass, and nuclear magnetic resonance spectra, we propose that chlorophyll f is [2-formyl]-chlorophyll a (C55H70O6N4Mg). This finding suggests that oxygenic photosynthesis can be extended further into the infrared region and may open associated bioenergy applications.

Delusions of gender : how our minds, society, and neurosexism create difference

Abstract: It's the twenty-first century, and although we tried to rear unisex children-boys who play with dolls and girls who like trucks-we failed. Even though the glass ceiling is cracked, most women stay comfortably beneath it. And everywhere we hear about vitally important "hardwired" differences between male and female brains. The neuroscience that we read about in magazines, newspaper articles, books, and sometimes even scientific journals increasingly tells a tale of two brains, and the result is more often than not a validation of the status quo. Women, it seems, are just too intuitive for math; men too focused for housework. Drawing on the latest research in neuroscience and psychology, Cordelia Fine debunks the myth of hardwired differences between men's and women's brains, unraveling the evidence behind such claims as men's brains aren't wired for empathy and women's brains aren't made to fix cars. She then goes one step further, offering a very different explanation of the dissimilarities between men's and women's behavior. Instead of a "male brain" and a "female brain," Fine gives us a glimpse of plastic, mutable minds that are continuously influenced by cultural assumptions about gender. Passionately argued and unfailingly astute, Delusions of Gender provides us with a much-needed corrective to the belief that men's and women's brains are intrinsically different-a belief that, as Fine shows with insight and humor, all too often works to the detriment of ourselves and our society.

Framework for integrating indigenous and scientific knowledge for disaster risk reduction.

Abstract: A growing awareness of the value of indigenous knowledge has prompted calls for its use within disaster risk reduction. The use of indigenous knowledge alongside scientific knowledge is increasingly advocated but there is as yet no clearly developed framework demonstrating how the two may be integrated to reduce community vulnerability to environmental hazards. This paper presents such a framework, using a participatory approach in which relevant indigenous and scientific knowledge may be integrated to reduce a community's vulnerability to environmental hazards. Focusing on small island developing states it presents an analysis of the need for such a framework alongside the difficulties of incorporating indigenous knowledge. This is followed by an explanation of the various processes within the framework, drawing on research completed in Papua New Guinea. This framework is an important first step in identifying how indigenous and scientific knowledge may be integrated to reduce community vulnerability to environmental hazards.

A cognitive behavioral model of social anxiety disorder: update and extension

Abstract: Publisher Summary This chapter focuses on the original 1997 cognitive behavioral model for social anxiety disorder (SAD), which delineates the processes by which SAIs are affected by their fear of negative evaluation in potentially social-evaluative situations. The original model has provided a solid framework for understanding the factors that comprise and maintain SAD. Since the publication of Rapee and Heimberg (1997), updates are provided in the form of reviews of the literature that support various aspects of the model, applied the model to a case study of a person with SAD, and conducted a comparison between the model and the very influential and productive model proposed by Clark and Wells. Given that there has been over a decade of intervening research, however, there are areas in the model that warrant expansion, as well as additional factors that necessitate inclusion in the model. The chapter presents a revised cognitive behavioral model of SAD and the research supporting these modifications. The chapter's primary focus are five areas: the important role of imagery (and imagery perspective), PEP, the combined cognitive biases hypothesis, fear of positive evaluation (FPE), and the potential role of difficulties in the regulation of emotional responses, including but not limited to anxiety.

Angiosperm wood structure: Global patterns in vessel anatomy and their relation to wood density and potential conductivity.

Abstract: Woody stems comprise a large biological carbon fraction and determine water transport between roots and leaves; their structure and function can infl uence both carbon and hydrological cycles. While angiosperm wood anatomy and density determine hydraulic conductivity and mechanical strength, little is known about interrelations across many species. We compiled a global data set comprising two anatomical traits for 3005 woody angiosperms: mean vessel lumen area ( A ) and number per unit area ( N ). From these, we calculated vessel lumen fraction ( F = A N ) and size to number ratio ( S = A / N ), a new vessel composition index. We examined the extent to which F and S infl uenced potential sapwood specifi c stem conductivity ( K S ) and wood density ( D ; dry mass/ fresh volume). F and S varied essentially independently across angiosperms. Variation in K S was driven primarily by S , and variation in D was virtually unrelated to F and S . Tissue density outside vessel lumens (D N ) must predominantly infl uence D . High S should confer faster K S but incur greater freeze – thaw embolism risk. F should also affect K S , and both F and D N should infl uence mechanical strength, capacitance, and construction costs. Improved theory and quantifi cation are needed to better understand ecological costs and benefi ts of these three distinct dimensions.

Faster Fully Homomorphic Encryption

Abstract: We describe two improvements to Gentry’s fully homomorphic scheme based on ideal lattices and its analysis: we provide a more aggressive analysis of one of the hardness assumptions (the one related to the Sparse Subset Sum Problem) and we introduce a probabilistic decryption algorithm that can be implemented with an algebraic circuit of low multiplicative degree. Combined together, these improvements lead to a faster fully homomorphic scheme, with a O(λ 3.5) bit complexity per elementary binary add/mult gate, where λ is the security parameter. These improvements also apply to the fully homomorphic schemes of Smart and Vercauteren [PKC’2010] and van Dijk et al. [Eurocrypt’2010].

Desiring China: Experiments in Neoliberalism, Sexuality, and Public Culture

Abstract: COURSE DESCRIPTION In popular and scholarly discourse, the term \"globalization\" is widely used to put a name to the shape of the contemporary world. In the realms of advertising, a variety of media, policymaking, politics, academia, and everyday talk, \"globalization\" references the sense that we now live in a deeply and everincreasingly interconnected, mobile, and speeded-up world that is unprecedented, fueled by technological innovations and geopolitical and economic transformations. Drawing on perspectives from history, anthropology, cultural and literary studies, geography, political economy, and sociology, this course will explore theories, discourses, and experiences of globalization.

The design of artificial nestboxes for the study of secondary hole-nesting birds: a review of methodological inconsistencies and potential biases

Abstract: The widespread use of artificial nestboxes has led to significant advances in our knowledge of the ecology, behaviour and physiology of cavity nesting birds, especially small passerines. Nestboxes have made it easier to perform routine monitoring and experimental manipulation of eggs or nestlings, and also repeatedly to capture, identify and manipulate the parents. However, when comparing results across study sites the use of nestboxes may also introduce a potentially significant confounding variable in the form of differences in nestbox design amongst studies, such as their physical dimensions, placement height, and the way in which they are constructed and maintained. However, the use of nestboxes may also introduce an unconsidered and potentially significant confounding variable due to differences in nestbox design amongst studies, such as their physical dimensions, placement height, and the way in which they are constructed and maintained. Here we review to what extent the characteristics of artificial nestboxes (e.g. size, shape, construction material, colour) are documented in the 'methods' sections of publications involving hole-nesting passer- ine birds using natural or excavated cavities or artificial nestboxes for reproduction and roosting. Despite explicit previ- ous recommendations that authors describe in detail the characteristics of the nestboxes used, we found that the description of nestbox characteristics in most recent publications remains poor and insufficient. We therefore list the types of descriptive data that should be included in the methods sections of relevant manuscripts and justify this by discussing how variation in nestbox characteristics can affect or confound conclusions from nestbox studies. We also propose several recommendations to improve the reliability and usefulness of research based on long-term studies of any secondary hole-nesting species using artificial nestboxes for breeding or roosting.

Sustainability considerations for electricity generation from biomass

Abstract: The sustainability of electricity generation from biomass has been assessed in this work according to the key indicators of price, efficiency, greenhouse gas emissions, availability, limitations, land use, water use and social impacts. Biomass produced electricity generally provides favourable price, efficiency, emissions, availability and limitations but often has unfavorably high land and water usage as well as social impacts. The type and growing location of the biomass source are paramount to its sustainability. Hardy crops grown on unused or marginal land and waste products are more sustainable than dedicated energy crops grown on food producing land using high rates of fertilisers.

Arterial blood pressure measurement and pulse wave analysis?their role in enhancing cardiovascular assessment

Abstract: The most common method of clinical measurement of arterial blood pressure is by means of the cuff sphygmomanometer. This instrument has provided fundamental quantitative information on arterial pressure in individual subjects and in populations and facilitated estimation of cardiovascular risk related to levels of blood pressure obtained from the brachial cuff. Although the measurement is taken in a peripheral limb, the values are generally assumed to reflect the pressure throughout the arterial tree in large conduit arteries. Since the arterial pressure pulse becomes modified as it travels away from the heart towards the periphery, this is generally true for mean and diastolic pressure, but not for systolic pressure, and so pulse pressure. The relationship between central and peripheral pulse pressure depends on propagation characteristics of arteries. Hence, while the sphygmomanometer gives values of two single points on the pressure wave (systolic and diastolic pressure), there is additional information that can be obtained from the time-varying pulse waveform that enables an improved quantification of the systolic load on the heart and other central organs. This topical review will assess techniques of pressure measurement that relate to the use of the cuff sphygmomanometer and to the non-invasive registration and analysis of the peripheral and central arterial pressure waveform. Improved assessment of cardiovascular function in relation to treatment and management of high blood pressure will result from future developments in the indirect measurement of arterial blood pressure that involve the conventional cuff sphygmomanometer with the addition of information derived from the peripheral arterial pulse.

The Psychology of memory, extended cognition, and socially distributed remembering

Abstract: This paper introduces a new, expanded range of relevant cognitive psychological research on collaborative recall and social memory to the philosophical debate on extended and distributed cognition. We start by examining the case for extended cognition based on the complementarity of inner and outer resources, by which neural, bodily, social, and environmental resources with disparate but complementary properties are integrated into hybrid cognitive systems, transforming or augmenting the nature of remembering or decision-making. Adams and Aizawa, noting this distinctive complementarity argument, say that they agree with it completely: but they describe it as “a non-revolutionary approach” which leaves “the cognitive psychology of memory as the study of processes that take place, essentially without exception, within nervous systems.” In response, we carve out, on distinct conceptual and empirical grounds, a rich middle ground between internalist forms of cognitivism and radical anti-cognitivism. Drawing both on extended cognition literature and on Sterelny’s account of the “scaffolded mind” (this issue), we develop a multidimensional framework for understanding varying relations between agents and external resources, both technological and social. On this basis we argue that, independent of any more “revolutionary” metaphysical claims about the partial constitution of cognitive processes by external resources, a thesis of scaffolded or distributed cognition can substantially influence or transform explanatory practice in cognitive science. Critics also cite various empirical results as evidence against the idea that remembering can extend beyond skull and skin. We respond with a more principled, representative survey of the scientific psychology of memory, focussing in particular on robust recent empirical traditions for the study of collaborative recall and transactive social memory. We describe our own empirical research on socially distributed remembering, aimed at identifying conditions for mnemonic emergence in collaborative groups. Philosophical debates about extended, embedded, and distributed cognition can thus make richer, mutually beneficial contact with independently motivated research programs in the cognitive psychology of memory.

Computer-delivered interventions for alcohol and tobacco use: a meta-analysis

Abstract: Aims To quantify the overall effectiveness of computer-delivered interventions for alcohol and tobacco use. Methods Meta-analysis of 42 effect sizes from randomized controlled trials, based on the responses of 10 632 individuals. Results The weighted average effect size (d) was 0.20, P < 0.001. While lower effect sizes were associated with studies addressing tobacco use (d = 0.14) this may well reflect differences in the types of outcome measure used. Effect sizes did not vary significantly as a function of treatment location, inclusion of entertaining elements, provision of normative feedback, availability of a discussion feature, number of treatment sessions, emphasis on relapse prevention, level of therapist involvement or follow-up period. Conclusion Findings of the meta-analysis suggest that minimal contact computer-delivered treatments that can be accessed via the internet may represent a cost-effective means of treating uncomplicated substance use and related problems.