Uppsala University

About: Uppsala University is a education organization based out in Uppsala, Sweden. It is known for research contribution in the topics: Population & Gene. The organization has 36485 authors who have published 107509 publications receiving 4220668 citations. The organization is also known as: Uppsala universitet & uu.se.

The complete genome sequence of Francisella tularensis, the causative agent of tularemia.

Abstract: Francisella tularensis is one of the most infectious human pathogens known. In the past, both the former Soviet Union and the US had programs to develop weapons containing the bacterium. We report the complete genome sequence of a highly virulent isolate of F. tularensis (1,892,819 bp). The sequence uncovers previously uncharacterized genes encoding type IV pili, a surface polysaccharide and iron-acquisition systems. Several virulence-associated genes were located in a putative pathogenicity island, which was duplicated in the genome. More than 10% of the putative coding sequences contained insertion-deletion or substitution mutations and seemed to be deteriorating. The genome is rich in IS elements, including IS630 Tc-1 mariner family transposons, which are not expected in a prokaryote. We used a computational method for predicting metabolic pathways and found an unexpectedly high proportion of disrupted pathways, explaining the fastidious nutritional requirements of the bacterium. The loss of biosynthetic pathways indicates that F. tularensis is an obligate host-dependent bacterium in its natural life cycle. Our results have implications for our understanding of how highly virulent human pathogens evolve and will expedite strategies to combat them.

SPICE: A Sparse Covariance-Based Estimation Method for Array Processing

Abstract: This paper presents a novel SParse Iterative Covariance-based Estimation approach, abbreviated as SPICE, to array processing. The proposed approach is obtained by the minimization of a covariance matrix fitting criterion and is particularly useful in many-snapshot cases but can be used even in single-snapshot situations. SPICE has several unique features not shared by other sparse estimation methods: it has a simple and sound statistical foundation, it takes account of the noise in the data in a natural manner, it does not require the user to make any difficult selection of hyperparameters, and yet it has global convergence properties.

Improved Performance of the Silicon Anode for Li-Ion Batteries: Understanding the Surface Modification Mechanism of Fluoroethylene Carbonate as an Effective Electrolyte Additive

Abstract: Silicon as a negative electrode material for lithium-ion batteries has attracted tremendous attention due to its high theoretical capacity, and fluoroethylene carbonate (FEC) was used as an electrolyte additive, which significantly improved the cyclability of silicon-based electrodes in this study. The decomposition of the FEC additive was investigated by synchrotron-based X-ray photoelectron spectroscopy (PES) giving a chemical composition depth-profile. The reduction products of FEC were found to mainly consist of LiF and −CHF–OCO2-type compounds. Moreover, FEC influenced the lithium hexafluorophosphate (LiPF6) decomposition reaction and may have suppressed further salt degradation. The solid electrolyte interphase (SEI) formed from the decomposition of ethylene carbonate (EC) and diethyl carbonate (DEC), without the FEC additive present, covered surface voids and lead to an increase in polarization. However, in the presence of FEC, which degrades at a higher reduction potential than EC and DEC, instant...

The genome of the green anole lizard and a comparative analysis with birds and mammals

Abstract: The evolution of the amniotic egg was one of the great evolutionary innovations in the history of life, freeing vertebrates from an obligatory connection to water and thus permitting the conquest of terrestrial environments 1 . Among amniotes, genome sequences are available for mammals and birds 2–4 , but not for non-avian