scispace - formally typeset
Journal ArticleDOI

Non-coding RNA genes and the modern RNA world.

Sean R. Eddy
- 01 Dec 2001 - 
- Vol. 2, Iss: 12, pp 919-929
TLDR
Non-coding RNAs seem to be particularly abundant in roles that require highly specific nucleic acid recognition without complex catalysis, such as in directing post-transcriptional regulation of gene expression or in guiding RNA modifications.
Abstract
Non-coding RNA (ncRNA) genes produce functional RNA molecules rather than encoding proteins. However, almost all means of gene identification assume that genes encode proteins, so even in the era of complete genome sequences, ncRNA genes have been effectively invisible. Recently, several different systematic screens have identified a surprisingly large number of new ncRNA genes. Non-coding RNAs seem to be particularly abundant in roles that require highly specific nucleic acid recognition without complex catalysis, such as in directing post-transcriptional regulation of gene expression or in guiding RNA modifications.

read more

Citations
More filters
Journal ArticleDOI

Multiplicity of phenotypes and RNA evolution.

TL;DR: It is shown that even though the energy profile of quasineutral mutations is almost identical to the neutral ones, a walk in the genotype space whose consecutive steps are quasinutral, can percolate phenotype space and so such walks bridge between neutral and random walks, providing further evidence that evolution is continuous.
Journal ArticleDOI

Synthesis and properties of 4-(diarylmethylene)imidazolinone-conjugated fluorescent nucleic acids

TL;DR: A novel fluorescent cytidine derivative bearing 4-(diarylmethylene)imidazolinones (DAINs) at C5-position was successfully synthesized and incorporated into oligonucleotides and the florescence intensity was changed depending on the nucleobases opposite to dCDAIN in the double stranded DNA or RNA.
Journal ArticleDOI

Identification and Characterization of New RNA Tetraloop Sequence Families.

TL;DR: This work used RNA Characterization of Secondary Structure Motifs, Dissecting the Spatial Structure of RNA (DSSR), and a bioinformatic approach to search for and characterize tertiary structure patterns among tetraloops, and identified and characterized three new tetraloop sequence families: YGAR, UGGU, and RMSA.
Journal ArticleDOI

Elucidating the functional role of predicted miRNAs in post-transcriptional gene regulation along with symbiosis in Medicago truncatula

TL;DR: Role of Medicago miRNAs in the regulation of various transcription factors are elucidated and will have a positive impact on the nitrogen fixing ability of this important model plant, which in turn will improve the soil fertility.
Patent

Bioionformality detectable group of novel regulatory oligonucleotides and uses thereof

TL;DR: In this article, a first group of novel oligonucleotides, identified as genomic address messenger or GAM oligon nucleotides and a second group of new operon-like polynucleotide, named as genomic record or GR polynotide, were introduced, which selectively inhibit translation of known target genes.
References
More filters
Journal ArticleDOI

Initial sequencing and analysis of the human genome.

Eric S. Lander, +248 more
- 15 Feb 2001 - 
TL;DR: The results of an international collaboration to produce and make freely available a draft sequence of the human genome are reported and an initial analysis is presented, describing some of the insights that can be gleaned from the sequence.
Journal ArticleDOI

The sequence of the human genome.

J. Craig Venter, +272 more
- 16 Feb 2001 - 
TL;DR: Comparative genomic analysis indicates vertebrate expansions of genes associated with neuronal function, with tissue-specific developmental regulation, and with the hemostasis and immune systems are indicated.
Journal ArticleDOI

The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

TL;DR: Two small lin-4 transcripts of approximately 22 and 61 nt were identified in C. elegans and found to contain sequences complementary to a repeated sequence element in the 3' untranslated region (UTR) of lin-14 mRNA, suggesting that lin- 4 regulates lin- 14 translation via an antisense RNA-RNA interaction.
Journal ArticleDOI

The Complete Genome Sequence of Escherichia coli K-12

TL;DR: The 4,639,221-base pair sequence of Escherichia coli K-12 is presented and reveals ubiquitous as well as narrowly distributed gene families; many families of similar genes within E. coli are also evident.
Journal ArticleDOI

Genetic regulatory mechanisms in the synthesis of proteins.

TL;DR: The synthesis of enzymes in bacteria follows a double genetic control, which appears to operate directly at the level of the synthesis by the gene of a shortlived intermediate, or messenger, which becomes associated with the ribosomes where protein synthesis takes place.
Related Papers (5)

Initial sequencing and analysis of the human genome.

Eric S. Lander, +248 more
- 15 Feb 2001 -