scispace - formally typeset
Journal ArticleDOI

Non-coding RNA genes and the modern RNA world.

Sean R. Eddy
- 01 Dec 2001 - 
- Vol. 2, Iss: 12, pp 919-929
TLDR
Non-coding RNAs seem to be particularly abundant in roles that require highly specific nucleic acid recognition without complex catalysis, such as in directing post-transcriptional regulation of gene expression or in guiding RNA modifications.
Abstract
Non-coding RNA (ncRNA) genes produce functional RNA molecules rather than encoding proteins. However, almost all means of gene identification assume that genes encode proteins, so even in the era of complete genome sequences, ncRNA genes have been effectively invisible. Recently, several different systematic screens have identified a surprisingly large number of new ncRNA genes. Non-coding RNAs seem to be particularly abundant in roles that require highly specific nucleic acid recognition without complex catalysis, such as in directing post-transcriptional regulation of gene expression or in guiding RNA modifications.

read more

Citations
More filters
Book ChapterDOI

Stem kernels for RNA sequence analyses

TL;DR: The study indicates that the discrimination ability of the stem kernel is strong compared with conventional methods, and the potential application is demonstrated by the detection of remotely homologous RNA families in terms of secondary structures.
Journal ArticleDOI

Knotify: An Efficient Parallel Platform for RNA Pseudoknot Prediction Using Syntactic Pattern Recognition

TL;DR: A novel heuristic over the widely accepted notion of free-energy minimization is conscripted to tackle such ambiguity in a performant way by utilizing each pattern’s context to unveil the most prominent pseudoknot pattern.
Journal ArticleDOI

RNomics: identification and function of small non-protein-coding RNAs in model organisms

TL;DR: Future challenges in the field of RNomics will include elucidation of their biological roles in the cell, in which many of these ncRNAs appear to function in guiding specific protein complexes to target nucleic acids.
Patent

Immunohistochemistry via hybridization chain reaction

TL;DR: In this paper, the present disclosure relates to methods involving HCR reactions that involve using trigger oligos to activate probes that initiate HCR, which is called trigger oligo activation.
References
More filters
Journal ArticleDOI

Initial sequencing and analysis of the human genome.

Eric S. Lander, +248 more
- 15 Feb 2001 - 
TL;DR: The results of an international collaboration to produce and make freely available a draft sequence of the human genome are reported and an initial analysis is presented, describing some of the insights that can be gleaned from the sequence.
Journal ArticleDOI

The sequence of the human genome.

J. Craig Venter, +272 more
- 16 Feb 2001 - 
TL;DR: Comparative genomic analysis indicates vertebrate expansions of genes associated with neuronal function, with tissue-specific developmental regulation, and with the hemostasis and immune systems are indicated.
Journal ArticleDOI

The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

TL;DR: Two small lin-4 transcripts of approximately 22 and 61 nt were identified in C. elegans and found to contain sequences complementary to a repeated sequence element in the 3' untranslated region (UTR) of lin-14 mRNA, suggesting that lin- 4 regulates lin- 14 translation via an antisense RNA-RNA interaction.
Journal ArticleDOI

The Complete Genome Sequence of Escherichia coli K-12

TL;DR: The 4,639,221-base pair sequence of Escherichia coli K-12 is presented and reveals ubiquitous as well as narrowly distributed gene families; many families of similar genes within E. coli are also evident.
Journal ArticleDOI

Genetic regulatory mechanisms in the synthesis of proteins.

TL;DR: The synthesis of enzymes in bacteria follows a double genetic control, which appears to operate directly at the level of the synthesis by the gene of a shortlived intermediate, or messenger, which becomes associated with the ribosomes where protein synthesis takes place.
Related Papers (5)

Initial sequencing and analysis of the human genome.

Eric S. Lander, +248 more
- 15 Feb 2001 -