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The International HapMap Consortium. The International HapMap Project (Co-PI of Hong Kong Centre which responsible for 2.5% of genome)

Pkh Tam
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The article was published on 2003-01-01 and is currently open access. It has received 557 citations till now. The article focuses on the topics: International HapMap Project.

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Citations
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Journal ArticleDOI

Boosting Haplotype Inference with Local Search

TL;DR: The use of local search to improve existing lower bounding procedures is described, guaranteed to be as tight as the existing procedures, allowing significant improvement of performance on challenging problem instances.
Dissertation

Construction et utilisation d'une base de connaissances pharmacogénomique pour l'intégration de données et la découverte de connaissances

Adrien Coulet
TL;DR: Une methode appelee Analyse des Assertions de Roles (ou AAR) permet d'utiliser des algorithmes de fouille de donnees sur un ensemble d'assertions de la base de connaissances pharmacogenomique and d'expliciter des connaISSances nouvelles et pertinentes qui y etaient enfouies.
Journal ArticleDOI

Global similarity with local differences in linkage disequilibrium between the Dutch and HapMap–CEU populations

TL;DR: This work compared pair-wise LD and LD block structure across autosomes between the Dutch population and the CEU–HapMap reference panel and found that sampling variation had a large effect on the estimation of LD blocks, as shown by the bootstrapping analysis.
Journal ArticleDOI

Efficient Genomewide Selection of PCA‐Correlated tSNPs for Genotype Imputation

TL;DR: This work applies, for the first time, PCA‐based methodology for efficient genomewide tSNP selection; explores the linear algebraic structure of the human genome; and evaluates the portability of genome‐wide tSNPs across a diverse set of populations.
References
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Journal ArticleDOI

A haplotype map of the human genome

John W. Belmont, +232 more
TL;DR: A public database of common variation in the human genome: more than one million single nucleotide polymorphisms for which accurate and complete genotypes have been obtained in 269 DNA samples from four populations, including ten 500-kilobase regions in which essentially all information about common DNA variation has been extracted.
Journal ArticleDOI

A second generation human haplotype map of over 3.1 million SNPs

Kelly A. Frazer, +237 more
- 18 Oct 2007 - 
TL;DR: The Phase II HapMap is described, which characterizes over 3.1 million human single nucleotide polymorphisms genotyped in 270 individuals from four geographically diverse populations and includes 25–35% of common SNP variation in the populations surveyed, and increased differentiation at non-synonymous, compared to synonymous, SNPs is demonstrated.
Journal ArticleDOI

Accurate whole human genome sequencing using reversible terminator chemistry

David R. Bentley, +201 more
- 06 Nov 2008 - 
TL;DR: An approach that generates several billion bases of accurate nucleotide sequence per experiment at low cost is reported, effective for accurate, rapid and economical whole-genome re-sequencing and many other biomedical applications.
Journal ArticleDOI

ABySS: A parallel assembler for short read sequence data

TL;DR: ABySS (Assembly By Short Sequences), a parallelized sequence assembler, was developed and assembled 3.5 billion paired-end reads from the genome of an African male publicly released by Illumina, Inc, representing 68% of the reference human genome.
Journal ArticleDOI

Genome sequence, comparative analysis and haplotype structure of the domestic dog

Kerstin Lindblad-Toh, +241 more
- 08 Dec 2005 - 
TL;DR: A high-quality draft genome sequence of the domestic dog is reported, together with a dense map of single nucleotide polymorphisms (SNPs) across breeds, to shed light on the structure and evolution of genomes and genes.