H
Henry Song
Researcher at Baylor College of Medicine
Publications - 5
Citations - 4765
Henry Song is an academic researcher from Baylor College of Medicine. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 5, co-authored 5 publications receiving 4475 citations.
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Journal ArticleDOI
The genome of the model beetle and pest Tribolium castaneum.
Stephen Richards,Richard A. Gibbs,George M. Weinstock,Susan J. Brown,Robin Denell,Richard W. Beeman,R. A. Gibbs,Gregor Bucher,Markus Friedrich,Cornelis J. P. Grimmelikhuijzen,Martin Klingler,Marcé D. Lorenzen,Siegfried Roth,Reinhard Schröder,Diethard Tautz,Evgeny M. Zdobnov,Donna M. Muzny,Tony Attaway,Stephanie Bell,Christian J. Buhay,Mimi N. Chandrabose,Dean Chavez,Kerstin P. Clerk-Blankenburg,Andrew Cree,Marvin Diep Dao,Clay Davis,Joseph Chacko,Huyen Dinh,Shannon Dugan-Rocha,Gerald R. Fowler,Toni T. Garner,Jeffrey Garnes,Andreas Gnirke,Alica Hawes,Judith Hernandez,Sandra Hines,Michael Holder,Jennifer Hume,Shalini N. Jhangiani,Vandita Joshi,Ziad Khan,LaRonda Jackson,Christie Kovar,Andrea Kowis,Sandra L. Lee,Lora Lewis,Jon Margolis,Margaret Morgan,Lynne V. Nazareth,Ngoc Nguyen,Geoffrey Okwuonu,David A. Parker,San Juana Ruiz,Jireh Santibanez,Joël Savard,Steven E. Scherer,Brian W. Schneider,Erica Sodergren,Selina Vattahil,Donna Villasana,Courtney Sherell White,Rita A. Wright,Yoonseong Park,Jeff Lord,Brenda Oppert,Susan J Brown,Liangjiang Wang,George Weinstock,Yue Liu,Kim C. Worley,Christine G. Elsik,Justin T. Reese,Eran Elhaik,Giddy Landan,Dan Graur,Peter Arensburger,Peter W. Atkinson,Jim Beidler,Jeffery P. Demuth,Douglas W. Drury,Yu Zhou Du,Haruhiko Fujiwara,Vincenza Maselli,Mizuko Osanai,Hugh M. Robertson,Zhijian Tu,Jianjun Wang,Suzhi Wang,Henry Song,Lan Zhang,Doreen Werner,Mario Stanke,Burkhard Morgenstern,Victor V. Solovyev,Peter Kosarev,Garth Brown,Hsiu Chuan Chen,Olga Ermolaeva,Wratko Hlavina,Yuri Kapustin,Boris Kiryutin,Paul Kitts,Donna Maglott,Kim D. Pruitt,Victor Sapojnikov,Alexandre Souvorov,Aaron J. Mackey,Robert M. Waterhouse,Stefan Wyder,Evgenia V. Kriventseva,Tatsuhiko Kadowaki,Peer Bork,Manuel Aranda,Riyue Bao,Anke Beermann,Nicola Berns,Renata Bolognesi,François Bonneton,Daniel Bopp,Thomas Butts,Arnaud Chaumot,Robin E. Denell,David E. K. Ferrier,Cassondra M. Gordon,Marek Jindra,Que Lan,H. Michael G. Lattorff,Vincent Laudet,Cornelia Von Levetsow,Zhenyi Liu,Rebekka Lutz,Jeremy A. Lynch,Rodrigo Nunes da Fonseca,Nico Posnien,Rolf Reuter,Johannes B. Schinko,Christian Schmitt,Michael Schoppmeier,Teresa D. Shippy,Franck Simonnet,Henrique Marques-Souza,Yoshinori Tomoyasu,Jochen Trauner,Maurijn van der Zee,Michel Vervoort,Nadine Wittkopp,Ernst A. Wimmer,Xiaoyun Yang,Andrew K. Jones,David B. Sattelle,Paul R. Ebert,David R. Nelson,Jeffrey G. Scott,Subbaratnam Muthukrishnan,Karl J. Kramer,Yasuyuki Arakane,Qingsong Zhu,David G. Hogenkamp,Radhika Dixit,Haobo Jiang,Zhen Zou,Jeremy L. Marshall,Elena N. Elpidina,K.S. Vinokurov,Cris Oppert,Jay D. Evans,Zhiqiang Lu,Picheng Zhao,Niranji Sumathipala,Boran Altincicek,Andreas Vilcinskas,Michael Williams,Dan Hultmark,Charles Hetru,Frank Hauser,Giuseppe Cazzamali,Michael Williamson,Bin Li,Yoshiaki Tanaka,Reinhard Predel,Susanne Neupert,Joachim Schachtner,Peter Verleyen,Florian Raible,Kimberly K. O. Walden,Sergio Angeli,Sylvain Forêt,Stefan Schuetz,Ryszard Maleszka,Sherry Miller,Daniela Grossmann +190 more
TL;DR: Tribolium castaneum is a member of the most species-rich eukaryotic order, a powerful model organism for the study of generalized insect development, and an important pest of stored agricultural products.
Journal ArticleDOI
The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution
Christine G. Elsik,Christine G. Elsik,Christine G. Elsik,Ross L. Tellam,Kim C. Worley,Kim C. Worley,Richard A. Gibbs,Donna M. Muzny,George M. Weinstock,George M. Weinstock,David L. Adelson,Evan E. Eichler,Evan E. Eichler,Laura Elnitski,Roderic Guigó,Debora L. Hamernik,Steve M. Kappes,Harris A. Lewin,David J. Lynn,Frank W. Nicholas,Alexandre Reymond,Monique Rijnkels,Loren C. Skow,Evgeny M. Zdobnov,Evgeny M. Zdobnov,Evgeny M. Zdobnov,Lawrence B. Schook,James E. Womack,Tyler Alioto,Stylianos E. Antonarakis,Alex Astashyn,Charles E. Chappie,Hsiu Chuan Chen,Jacqueline Chrast,Francisco Câmara,Olga Ermolaeva,Charlotte N. Henrichsen,Wratko Hlavina,Yuri Kapustin,Boris Kiryutin,Paul Kitts,Felix Kokocinski,Melissa J. Landrum,Donna Maglott,Kim D. Pruitt,Victor Sapojnikov,Stephen M. J. Searle,Victor V. Solovyev,Alexandre Souvorov,Catherine Ucla,Carine Wyss,Juan Manuel Anzola,Daniel Gerlach,Daniel Gerlach,Eran Elhaik,Eran Elhaik,Dan Graur,Justin T. Reese,Robert C. Edgar,John C. McEwan,Gemma Marie Payne,Joy M. Raison,Thomas Junier,Thomas Junier,Evgenia V. Kriventseva,Eduardo Eyras,Mireya Plass,Ravikiran Donthu,Denis M. Larkin,James M. Reecy,Mary Qu Yang,Lin Chen,Ze Cheng,Carol G. Chitko-McKown,George E. Liu,Lakshmi K. Matukumalli,Lakshmi K. Matukumalli,Jiuzhou Song,Bin Zhu,Daniel G. Bradley,Fiona S. L. Brinkman,Lilian P.L. Lau,Matthew D. Whiteside,Angela K. Walker,Thomas T. Wheeler,Theresa Casey,J. Bruce German,J. Bruce German,Danielle G. Lemay,Nauman J. Maqbool,A.J. Molenaar,Seongwon Seo,Paul Stothard,Cynthia L. Baldwin,R. Baxter,Candice L. Brinkmeyer-Larigford,Wendy C. Brown,Christopher P. Childers,Timothy Connelley,Shirley A. Ellis,Krista L. Fritz,Elizabeth Glass,Carolyn T.A. Herzig,Antti Livanainen,Kevin K. Lahmers,Anna K. Bennett,C. Michael Dickens,James G. R. Gilbert,Darren E. Hagen,Hanni Salih,Jan Aerts,Alexandre Rodrigues Caetano,Brian P. Dalrymple,José Fernando Garcia,Clare A. Gill,Stefan Hiendleder,Erdogan Memili,D.M. Spurlock,John L. Williams,Lee Alexander,Michael J. Brownstein,Le Luo Guan,Robert A. Holt,Steven J.M. Jones,Marco A. Marra,Richard A. Moore,Stephen S. Moore,Andrew J. Roberts,Masaaki Taniguchi,Masaaki Taniguchi,Richard C. Waterman,Joseph Chacko,Mimi M. Chandrabose,Andy Cree,Marvin Diep Dao,Huyen Dinh,Ramatu Ayiesha Gabisi,Sandra Hines,Jennifer Hume,Shalini N. Jhangiani,Vandita Joshi,Christie Kovar,Lora Lewis,Yin Shin Liu,John Lopez,Margaret Morgan,Ngoc Nguyen,Geoffrey Okwuonu,San Juana Ruiz,Jireh Santibanez,Rita A. Wright,Christian J. Buhay,Yan Ding,Shannon Dugan-Rocha,Judith Herdandez,Michael Holder,Aniko Sabo,Amy Egan,Jason Goodell,Katarzyna Wilczek-Boney,Gerald R. Fowler,Matthew Hitchens,Ryan J. Lozado,Charles Moen,David Steffen,James T. Warren,Jingkun Zhang,Readman Chiu,Jacqueline E. Schein,K. James Durbin,K. James Durbin,Paul Havlak,Paul Havlak,Huaiyang Jiang,Yue Liu,Xiang Qin,Yanru Ren,Yufeng Shen,Yufeng Shen,Henry Song,Stephanie Bell,Clay Davis,Angela Jolivet Johnson,Sandra L. Lee,Lynne V. Nazareth,Bella Mayurkumar Patel,Ling Ling Pu,Selina Vattathil,Rex Lee Williams,Stacey M. Curry,Cerissa Hamilton,Erica Sodergren,Erica Sodergren,David A. Wheeler,Wes Barris,Gary L. Bennett,André Eggen,Ronnie D. Green,Gregory P. Harhay,Matthew Hobbs,Oliver C. Jann,John W. Keele,Matthew Peter Kent,Sigbjam Lien,Stephanie D. McKay,Sean McWilliam,Abhirami Ratnakumar,Robert D. Schnabel,Timothy P. L. Smith,Warren M. Snelling,Tad S. Sonstegard,Roger T. Stone,Yoshikazu Sugimoto,Akiko Takasuga,Jeremy F. Taylor,Curtis P. Van Tassell,Michael D. MacNeil,A.R.R. Abatepaulo,Colette A. Abbey,Virpi Ahola,Lassudara G. Almeida,Ariel Fernando Amadio,Elen Anatriello,Suria M. Bahadue,Fernando H. Biase,Clayton R. Boldt,Jeffery A. Carroll,W. A. Carvalho,Eliane P. Cervelatti,Elsa Chacko,Jennifer E. Chapin,Ye Cheng,Jung-Woo Choi,Adam J. Colley,Tatiana A. DeCampos,Marcos De Donato,Isabel Kinney Ferreira de Miranda Santos,Carlo José Freire de Oliveira,Heather M Deobald,Eve Devinoy,Kaitlin E. Donohue,Peter Dove,Annett Eberlein,Carolyn Fitzsimmons,Alessandra Mara Franzin,Gustavo Garcia,Sem Genini,Cody J. Gladney,Jason R. Grant,Marion L. Greaser,Jonathan A. Green,Darryl L. Hadsell,Hatam A. Hakimov,Rob Halgren,Jennifer Harrow,E. Hart,N. Hastings,Marta Hernández,Zhi-Liang Hu,Antti Iivanainen,Aaron Ingham,Terhi Iso-Touru,Catherine Jamis,Kirsty Jensen,Dimos Kapetis,Tovah Kerr,Sari S. Khalil,Hasan Khatib,D. Kolbehdari,D. Kolbehdari,Cham G. Kumar,Dinesh Kumar,Richard J. Leach,Justin C. Lee,Changxi Li,Krystin M. Logan,Roberto Malinverni,E. Marques,William F. Martin,Natália F. Martins,Sandra Regina Maruyama,Raffaele Mazza,Kim L. McLean,Juan F. Medrano,Barbara T. Moreno,Daniela D. Moré,Carl T. Muntean,Hari Prasad Nandakumar,Marcelo Fábio Gouveia Nogueira,Ingrid Olsaker,Sameer D. Pant,Francesca Panzitta,Rosemeire Conceição Parra Pastor,Mario Andres Poli,Nathan Poslusny,Satyanarayana Rachagani,Shoba Ranganathan,Shoba Ranganathan,Andrej Razpet,Penny K. Riggs,Gonzalo Rincon,Nelida Rodriguez-Osorio,Nelida Rodriguez-Osorio,Sandra L. Rodriguez-Zas,Natasha E. Romero,Anne G. Rosenwald,Lillian Sando,Sheila M. Schmutz,Libing Shen,Laura Sherman,Bruce R. Southey,Ylva Strandberg Lutzow,Jonathan V. Sweedler,Imke Tammen,Bhanu Prakash V.L. Telugu,Jennifer M. Urbanski,Yuri Tani Utsunomiya,Chris P. Verschoor,Ashley J. Waardenberg,Zhiquan Wang,Robert Ward,Rosemarie Weikard,Thomas H. Welsh,Stephen N. White,Stephen N. White,Laurens G. Wilming,Kris R. Wunderlich,Jianqi Yang,Feng-Qi Zhao +328 more
TL;DR: To understand the biology and evolution of ruminants, the cattle genome was sequenced to about sevenfold coverage and provides a resource for understanding mammalian evolution and accelerating livestock genetic improvement for milk and meat production.
The genome of the model beetle and pest Tribolium castaneum
Stephen Richards,R. A. Gibbs,George M. Weinstock,Susan J. Brown,R. E. Denell,Richard W. Beeman,Richard A. Gibbs,Gregor Bucher,Markus Friedrich,Cornelis J. P. Grimmelikhuijzen,Martin Klingler,Marcé D. Lorenzen,Siegfried Roth,Reinhard Schröder,Diethard Tautz,Evgeny M. Zdobnov,Donna M. Muzny,Tony Attaway,Stephanie Bell,Christian J. Buhay,Mimi N. Chandrabose,Dean Chavez,KP Clerk-Blankenburg,Andy Cree,Marvin Diep Dao,Clay Davis,Joseph Chacko,Huyen Dinh,Shannon Dugan-Rocha,Gerald R. Fowler,Toni T. Garner,Jeffrey Garnes,Andreas Gnirke,Alicia Hawes,Judith Hernandez,Sandra Hines,M. Holder,Jennifer Hume,Shalini N. Jhangiani,Joshi,Ziad Khan,LaRonda Jackson,Christie Kovar,A Kowis,Sandra L. Lee,Lora Lewis,Jonathan Margolis,Michael J. Morgan,Lynne V. Nazareth,Ngoc Nguyen,Geoffrey Okwuonu,David Parker,San Juana Ruiz,Jireh Santibanez,Joël Savard,Steve Scherer,Brian W. Schneider,Erica Sodergren,S Vattahil,Donna Villasana,Courtney Sherell White,Rita A. Wright,Yoonseong Park,Joanne Lord,Brenda Oppert,Stephen Brown,Liangjiang Wang,G Weinstock,Yue Liu,Kim C. Worley,Christine G. Elsik,Justin T. Reese,Eran Elhaik,Giddy Landan,Dan Graur,Peter Arensburger,Peter W. Atkinson,J Beidler,Jeffery P. Demuth,Douglas W. Drury,YZ Du,Haruhiko Fujiwara,Maselli,Mizuko Osanai,Hugh M. Robertson,Zhijian Tu,Jianjun Wang,Suzhi Wang,Henry Song,Lan Zhang,Doreen Werner,Mario Stanke,Burkhard Morgenstern,Solovyev,Peter Kosarev,Garth Brown,Hsiu Chuan Chen,Olga Ermolaeva,Wratko Hlavina,Yuri Kapustin +99 more
TL;DR: Tribolium castaneum is a member of the most species-rich eukaryotic order, a powerful model organism for the study of generalized insect development, and an important pest of stored agricultural products as discussed by the authors.
Journal ArticleDOI
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
Keith Bradnam,Joseph Fass,Anton Alexandrov,Paul Baranay,Michael Bechner,Inanc Birol,Sébastien Boisvert,Jarrod Chapman,Guillaume Chapuis,Guillaume Chapuis,Rayan Chikhi,Rayan Chikhi,Hamidreza Chitsaz,Wen-Chi Chou,Jacques Corbeil,Cristian Del Fabbro,T. Roderick Docking,Richard Durbin,Dent Earl,Scott J. Emrich,Pavel Fedotov,Nuno A. Fonseca,Ganeshkumar Ganapathy,Richard A. Gibbs,Sante Gnerre,Elenie Godzaridis,Steve Goldstein,Matthias Haimel,Giles Hall,David Haussler,Joseph B. Hiatt,Isaac Ho,Jason T. Howard,Martin Hunt,Shaun D. Jackman,David B. Jaffe,Erich D. Jarvis,Huaiyang Jiang,Sergey Kazakov,Paul J. Kersey,Jacob O. Kitzman,James R. Knight,Sergey Koren,Tak-Wah Lam,Dominique Lavenier,Dominique Lavenier,François Laviolette,Yingrui Li,Zhenyu Li,Binghang Liu,Yue Liu,Ruibang Luo,Iain MacCallum,Matthew D. MacManes,Nicolas Maillet,Sergey Melnikov,Bruno Vieira,Delphine Naquin,Zemin Ning,Thomas D. Otto,Benedict Paten,Octávio S. Paulo,Adam M. Phillippy,Francisco Pina-Martins,Michael Place,Dariusz Przybylski,Xiang Qin,Carson Qu,Filipe J. Ribeiro,Stephen Richards,Daniel S. Rokhsar,Daniel S. Rokhsar,J. Graham Ruby,J. Graham Ruby,Simone Scalabrin,Michael C. Schatz,David C. Schwartz,Alexey Sergushichev,Ted Sharpe,Timothy I. Shaw,Jay Shendure,Yujian Shi,Jared T. Simpson,Henry Song,Fedor Tsarev,Francesco Vezzi,Riccardo Vicedomini,Jun Wang,Kim C. Worley,Shuangye Yin,Siu-Ming Yiu,Jianying Yuan,Guojie Zhang,Hao Zhang,Shiguo Zhou,Ian F Korf +95 more
TL;DR: The Assemblathon 2 as mentioned in this paper presented a variety of sequence data to be assembled for three vertebrate species (a bird, a fish, and a snake) from 21 participating teams.
Journal ArticleDOI
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
Keith Bradnam,Joseph Fass,Anton Alexandrov,Paul Baranay,Michael Bechner,Inanc Birol,Sébastien Boisvert,Jarrod Chapman,Guillaume Chapuis,Guillaume Chapuis,Rayan Chikhi,Rayan Chikhi,Hamidreza Chitsaz,Wen-Chi Chou,Jacques Corbeil,Cristian Del Fabbro,Roderick R. Docking,Richard Durbin,Dent Earl,Scott J. Emrich,Pavel Fedotov,Nuno A. Fonseca,Ganeshkumar Ganapathy,Richard A. Gibbs,Sante Gnerre,Elenie Godzaridis,Steve Goldstein,Matthias Haimel,Giles Hall,David Haussler,Joseph B. Hiatt,Isaac Ho,Jason T. Howard,Martin Hunt,Shaun D. Jackman,David B. Jaffe,Erich D. Jarvis,Huaiyang Jiang,Sergey Kazakov,Paul J. Kersey,Jacob O. Kitzman,James R. Knight,Sergey Koren,Tak-Wah Lam,Dominique Lavenier,Dominique Lavenier,Dominique Lavenier,François Laviolette,Yingrui Li,Zhenyu Li,Binghang Liu,Yue Liu,Ruibang Luo,Iain MacCallum,Matthew D. MacManes,Nicolas Maillet,Nicolas Maillet,Sergey Melnikov,Delphine Naquin,Delphine Naquin,Zemin Ning,Thomas D. Otto,Benedict Paten,Octávio S. Paulo,Adam M. Phillippy,Francisco Pina-Martins,Michael Place,Dariusz Przybylski,Xiang Qin,Carson Qu,Filipe J. Ribeiro,Stephen Richards,Daniel S. Rokhsar,Daniel S. Rokhsar,J. Graham Ruby,J. Graham Ruby,Simone Scalabrin,Michael C. Schatz,David C. Schwartz,Alexey Sergushichev,Ted Sharpe,Timothy I. Shaw,Jay Shendure,Yujian Shi,Jared T. Simpson,Henry Song,Fedor Tsarev,Francesco Vezzi,Riccardo Vicedomini,Bruno Vieira,Jun Wang,Kim C. Worley,Shuangye Yin,Siu-Ming Yiu,Jianying Yuan,Guojie Zhang,Hao Zhang,Shiguo Zhou,Ian F Korf +98 more
TL;DR: The Assemblathon 2 as discussed by the authors presented a variety of sequence data to be assembled for three vertebrate species (a bird, a fish, and a snake) from 21 participating teams.