Y
Yutaka Suzuki
Researcher at University of Tokyo
Publications - 875
Citations - 42146
Yutaka Suzuki is an academic researcher from University of Tokyo. The author has contributed to research in topics: Gene & Medicine. The author has an hindex of 85, co-authored 767 publications receiving 35471 citations. Previous affiliations of Yutaka Suzuki include Japan Agency for Medical Research and Development & Institute for the Physics and Mathematics of the Universe.
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Journal ArticleDOI
The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants
Stefan A. Rensing,Daniel Lang,Andreas Zimmer,Astrid Terry,Asaf Salamov,Harris Shapiro,Tomoaki Nishiyama,Pierre-François Perroud,Erika Lindquist,Yasuko Kamisugi,Takako Tanahashi,Takako Tanahashi,Keiko Sakakibara,Tomomichi Fujita,Kazuko Oishi,Tadasu Shin-I,Yoko Kuroki,Atsushi Toyoda,Yutaka Suzuki,Shin-ichi Hashimoto,Kazuo Yamaguchi,Sumio Sugano,Yuji Kohara,Yuji Kohara,Asao Fujiyama,Asao Fujiyama,Aldwin M. Anterola,Setsuyuki Aoki,Neil W. Ashton,W. Brad Barbazuk,Elizabeth I. Barker,Jeffrey L. Bennetzen,Robert E. Blankenship,Sung Hyun Cho,Susan K. Dutcher,Mark Estelle,Jeffrey A. Fawcett,Heidrun Gundlach,Kousuke Hanada,Alexander Heyl,Karen A. Hicks,Karen A. Hicks,Jon Hughes,Martin Lohr,Klaus F. X. Mayer,Alexander N. Melkozernov,Takashi Murata,Takashi Murata,David R. Nelson,Birgit Pils,Michael J. Prigge,Bernd Reiss,Tanya Renner,Stephane Rombauts,Paul J. Rushton,Anton A. Sanderfoot,Gabriele Schween,Shin-Han Shiu,Kurt Stueber,Frederica L. Theodoulou,Hank Tu,Yves Van de Peer,P. J. Verrier,Elizabeth R. Waters,Andrew J. Wood,Lixing Yang,David J. Cove,David J. Cove,Andrew C. Cuming,Mitsuyasu Hasebe,Mitsuyasu Hasebe,Susan Lucas,Brent D. Mishler,Ralf Reski,Igor V. Grigoriev,Ralph S. Quatrano,Jeffrey L. Boore,Jeffrey L. Boore +77 more
TL;DR: This comparison reveals genomic changes concomitant with the evolutionary movement to land, including a general increase in gene family complexity; loss of genes associated with aquatic environments; acquisition of genes for tolerating terrestrial stresses; and the development of the auxin and abscisic acid signaling pathways for coordinating multicellular growth and dehydration response.
Journal ArticleDOI
Frequent pathway mutations of splicing machinery in myelodysplasia
Kenichi Yoshida,Masashi Sanada,Yuichi Shiraishi,Daniel Nowak,Yasunobu Nagata,Ryo Yamamoto,Yusuke Sato,Aiko Sato-Otsubo,Ayana Kon,Masao Nagasaki,George Chalkidis,Yutaka Suzuki,Masashi Shiosaka,Ryoichiro Kawahata,Tomoyuki Yamaguchi,Makoto Otsu,Naoshi Obara,Mamiko Sakata-Yanagimoto,Ken Ishiyama,Hiraku Mori,Florian Nolte,Wolf-Karsten Hofmann,Shuichi Miyawaki,Sumio Sugano,Claudia Haferlach,H. Phillip Koeffler,H. Phillip Koeffler,Lee Yung Shih,Torsten Haferlach,Shigeru Chiba,Hiromitsu Nakauchi,Satoru Miyano,Seishi Ogawa +32 more
TL;DR: The results provide the first evidence indicating that genetic alterations of the major splicing components could be involved in human pathogenesis, also implicating a novel therapeutic possibility for myelodysplasia.
Journal ArticleDOI
Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D
Motomichi Matsuzaki,Osami Misumi,Tadasu Shin-I,Shinichiro Maruyama,Manabu Takahara,Shin-ya Miyagishima,Toshiyuki Mori,Keiji Nishida,Fumi Yagisawa,Keishin Nishida,Yamato Yoshida,Yoshiki Nishimura,Shunsuke Nakao,Tamaki Kobayashi,Yu Momoyama,Tetsuya Higashiyama,Ayumi Minoda,Masako Sano,Hisayo Nomoto,Kazuko Oishi,Hiroko Hayashi,Fumiko Ohta,Satoko Nishizaka,Shinobu Haga,Sachiko Miura,Tomomi Morishita,Yukihiro Kabeya,Kimihiro Terasawa,Yutaka Suzuki,Yasuyaki Ishii,Shuichi Asakawa,Hiroyoshi Takano,Niji Ohta,Haruko Kuroiwa,Kan Tanaka,Nobuyoshi Shimizu,Sumio Sugano,Naoki Sato,Hisayoshi Nozaki,Naotake Ogasawara,Yuji Kohara,Tsuneyoshi Kuroiwa +41 more
TL;DR: The results indicate that the C. merolae genome provides a model system with a simple gene composition for studying the origin, evolution and fundamental mechanisms of eukaryotic cells.
Journal ArticleDOI
Integrated molecular analysis of clear-cell renal cell carcinoma.
Yusuke Sato,Tetsuichi Yoshizato,Yuichi Shiraishi,Shigekatsu Maekawa,Yusuke Okuno,Takumi Kamura,Teppei Shimamura,Aiko Sato-Otsubo,Genta Nagae,Hiromichi Suzuki,Yasunobu Nagata,Kenichi Yoshida,Ayana Kon,Yutaka Suzuki,Kenichi Chiba,Hiroko Tanaka,Atsushi Niida,Akihiro Fujimoto,Tatsuhiko Tsunoda,Teppei Morikawa,Daichi Maeda,Haruki Kume,Sumio Sugano,Masashi Fukayama,Hiroyuki Aburatani,Masashi Sanada,Masashi Sanada,Satoru Miyano,Yukio Homma,Seishi Ogawa,Seishi Ogawa +30 more
TL;DR: This integrated molecular analysis of clear-cell renal cell carcinoma unmasked new correlations between DNA methylation, gene mutation and/or gene expression and copy number profiles, enabling the stratification of clinical risks for patients with ccRCC.
Journal ArticleDOI
Complete sequencing and characterization of 21,243 full-length human cDNAs
Toshio Ota,Yutaka Suzuki,Tetsuo Nishikawa,Tetsuji Otsuki,Tomoyasu Sugiyama,Ryotaro Irie,Ai Wakamatsu,Koji Hayashi,Hiroyuki Sato,Keiichi Nagai,Kouichi Kimura,Hiroshi Makita,Mitsuo Sekine,Masaya Obayashi,Tatsunari Nishi,Toshikazu Shibahara,Toshihiro Tanaka,Shizuko Ishii,Junichi Yamamoto,Kaoru Saito,Yuri Kawai,Yuko Isono,Yoshitaka Nakamura,Kenji Nagahari,Katsuhiko Murakami,Tomohiro Yasuda,Takao Iwayanagi,Masako Wagatsuma,Akiko Shiratori,Hiroaki Sudo,Takehiko Hosoiri,Yoshiko Kaku,Hiroyo Kodaira,Hiroshi Kondo,Masanori Sugawara,Makiko Takahashi,Katsuhiro Kanda,Takahide Yokoi,Takako Furuya,Emiko Kikkawa,Yuhi Omura,Kumi Abe,Kumiko Kamihara,Naoko Katsuta,Kazuomi Sato,Machiko Tanikawa,Makoto Yamazaki,Ken Ninomiya,Tadashi Ishibashi,Hiromichi Yamashita,Katsuji Murakawa,Kiyoshi Fujimori,Hiroyuki Tanai,Manabu Kimata,Motoji Watanabe,Susumu Hiraoka,Yoshiyuki Chiba,Shinichi Ishida,Yukio Ono,Sumiyo Takiguchi,Susumu Watanabe,Makoto Yosida,Tomoko Hotuta,Junko Kusano,Keiichi Kanehori,Asako Takahashi-Fujii,Hiroto Hara,Tomo-o Tanase,Yoshiko Nomura,Sakae Togiya,Fukuyo Komai,Reiko Hara,Kazuha Takeuchi,Miho Arita,Nobuyuki Imose,Kaoru Musashino,Hisatsugu Yuuki,Atsushi Oshima,Naokazu Sasaki,Satoshi Aotsuka,Yoko Yoshikawa,Hiroshi Matsunawa,Tatsuo Ichihara,Namiko Shiohata,Sanae Sano,Shogo Moriya,Hiroko Momiyama,Noriko Satoh,Sachiko Takami,Yuko Terashima,Osamu Suzuki,Satoshi Nakagawa,Akihiro Senoh,Hiroshi Mizoguchi,Yoshihiro Goto,Fumio Shimizu,Hirokazu Wakebe,Haretsugu Hishigaki,Takeshi Watanabe,Akio Sugiyama,Makoto Takemoto,Bunsei Kawakami,Masaaki Yamazaki,Koji Watanabe,Ayako Kumagai,Shoko Itakura,Yasuhito Fukuzumi,Yoshifumi Fujimori,Megumi Komiyama,Hiroyuki Tashiro,Akira Tanigami,Tsutomu Fujiwara,Toshihide Ono,Katsue Yamada,Yuka Fujii,Kouichi Ozaki,Maasa Hirao,Yoshihiro Ohmori,Ayako Kawabata,Takeshi Hikiji,Naoko Kobatake,Hiromi Inagaki,Yasuko Ikema,Sachiko Okamoto,Rie Okitani,Takuma Kawakami,Saori Noguchi,Tomoko Itoh,Keiko Shigeta,Tadashi Senba,Kyoka Matsumura,Yoshie Nakajima,Takae Mizuno,Misato Morinaga,Masahide Sasaki,Takushi Togashi,Masaaki Oyama,Hiroko Hata,Manabu Watanabe,Takami Komatsu,Junko Mizushima-Sugano,Tadashi Satoh,Tadashi Satoh,Yuko Shirai,Yukiko Takahashi,Kiyomi Nakagawa,Koji Okumura,Takahiro Nagase,Nobuo Nomura,Hisashi Kikuchi,Yasuhiko Masuho,Riu Yamashita,Kenta Nakai,Tetsushi Yada,Yusuke Nakamura,Osamu Ohara,Takao Isogai,Sumio Sugano,Sumio Sugano +158 more
TL;DR: There seems to be a slight bias against GC-rich transcripts in current gene prediction procedures in the “full-length long Japan” collection of sequenced human cDNAs.