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Open AccessJournal ArticleDOI

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.

TLDR
In this paper, the authors characterized Cpf1, a putative class 2 CRISPR effector, which is a single RNA-guided endonuclease lacking tracrRNA and utilizes a T-rich protospacer-adjacent motif.
About
This article is published in Cell.The article was published on 2015-10-22 and is currently open access. It has received 3436 citations till now. The article focuses on the topics: CRISPR/Cpf1 & Cas9.

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Citations
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Journal ArticleDOI

Heat‐shock‐inducible CRISPR/Cas9 system generates heritable mutations in rice

TL;DR: HS‐CRISPR/Cas9 is a controlled and reasonably efficient platform for genome editing, and therefore, a promising tool for limiting genome‐wide off‐target effects and improving the precision of genome editing.
Journal ArticleDOI

Cpf1 enables fast and efficient genome editing in Aspergilli

TL;DR: The experiments demonstrate that Cpf1 can be efficiently used in Aspergilli for gene editing thereby expanding the range of genomic DNA sequences that can be targeted by CRISPR technologies.
Journal ArticleDOI

Gene Editing of Human Hematopoietic Stem and Progenitor Cells: Promise and Potential Hurdles

TL;DR: The specific applications of gene-editing technologies in human HSPCs, as informed by prior experience with gene addition strategies are discussed, focusing on strategies to move these techniques toward implementation in safe and effective clinical trials.
Patent

Crispr hybrid dna/rna polynucleotides and methods of use

TL;DR: The present disclosure provides DNA-guided CRISPR systems, polynucleotides comprising DNA, RNA and mixtures thereof, and methods of use involving such polynuclotides.
Journal ArticleDOI

CAMERS-B: CRISPR/Cpf1 assisted multiple-genes editing and regulation system for Bacillus subtilis.

TL;DR: A powerful tool called CRISPR/Cpf1 assisted multiple‐genes editing and regulation system for B. subtilis was constructed, a synthetic oligos mediated assembly ofCRISPR RNA (crRNA) array method was created, and the synthesis pathways of N‐acetylglucosamine and acetoin were engineered using this system.
References
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Journal ArticleDOI

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

TL;DR: A new criterion for triggering the extension of word hits, combined with a new heuristic for generating gapped alignments, yields a gapped BLAST program that runs at approximately three times the speed of the original.
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Fast and accurate short read alignment with Burrows–Wheeler transform

TL;DR: Burrows-Wheeler Alignment tool (BWA) is implemented, a new read alignment package that is based on backward search with Burrows–Wheeler Transform (BWT), to efficiently align short sequencing reads against a large reference sequence such as the human genome, allowing mismatches and gaps.
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MUSCLE: multiple sequence alignment with high accuracy and high throughput

TL;DR: MUSCLE is a new computer program for creating multiple alignments of protein sequences that includes fast distance estimation using kmer counting, progressive alignment using a new profile function the authors call the log-expectation score, and refinement using tree-dependent restricted partitioning.
Journal ArticleDOI

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.

TL;DR: This study reveals a family of endonucleases that use dual-RNAs for site-specific DNA cleavage and highlights the potential to exploit the system for RNA-programmable genome editing.
Journal ArticleDOI

Multiplex Genome Engineering Using CRISPR/Cas Systems

TL;DR: The type II prokaryotic CRISPR (clustered regularly interspaced short palindromic repeats)/Cas adaptive immune system has been shown to facilitate RNA-guided site-specific DNA cleavage as discussed by the authors.
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