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Showing papers by "Ames Research Center published in 2006"


Journal ArticleDOI
01 Oct 2006
TL;DR: The goal was to summarize the environments in which NASA-TLX has been applied, the types of activities the raters performed, other variables that were measured that did (or did not) covary, methodological issues, and lessons learned.
Abstract: NASA-TLX is a multi-dimensional scale designed to obtain workload estimates from one or more operators while they are performing a task or immediately afterwards. The years of research that precede...

2,994 citations


Journal ArticleDOI
10 Nov 2006-Science
TL;DR: The sequence and analysis of the 814-megabase genome of the sea urchin Strongylocentrotus purpuratus is reported, a model for developmental and systems biology and yields insights into the evolution of deuterostomes.
Abstract: We report the sequence and analysis of the 814-megabase genome of the sea urchin Strongylocentrotus purpuratus, a model for developmental and systems biology. The sequencing strategy combined whole-genome shotgun and bacterial artificial chromosome (BAC) sequences. This use of BAC clones, aided by a pooling strategy, overcame difficulties associated with high heterozygosity of the genome. The genome encodes about 23,300 genes, including many previously thought to be vertebrate innovations or known only outside the deuterostomes. This echinoderm genome provides an evolutionary outgroup for the chordates and yields insights into the evolution of deuterostomes.

1,059 citations


Journal ArticleDOI
15 Dec 2006-Science
TL;DR: The Stardust spacecraft collected thousands of particles from comet 81P/Wild 2 and returned them to Earth for laboratory study, and preliminary examination shows that the nonvolatile portion of the comet is an unequilibrated assortment of materials that have both presolar and solar system origin.
Abstract: The Stardust spacecraft collected thousands of particles from comet 81P/Wild 2 and returned them to Earth for laboratory study. The preliminary examination of these samples shows that the nonvolatile portion of the comet is an unequilibrated assortment of materials that have both presolar and solar system origin. The comet contains an abundance of silicate grains that are much larger than predictions of interstellar grain models, and many of these are high-temperature minerals that appear to have formed in the inner regions of the solar nebula. Their presence in a comet proves that the formation of the solar system included mixing on the grandest scales.

886 citations


Journal ArticleDOI
TL;DR: The SAGE Legacy project as discussed by the authors performed a uniform and unbiased imaging survey of the Large Magellanic Cloud (LMC; 7° × 7°) using the IRAC (3.6, 4.5, 5.8, and 8 μm) and MIPS (24, 70, and 160μm) instruments on board the Spitzer Space Telescope.
Abstract: We are performing a uniform and unbiased imaging survey of the Large Magellanic Cloud (LMC; ~7° × 7°) using the IRAC (3.6, 4.5, 5.8, and 8 μm) and MIPS (24, 70, and 160 μm) instruments on board the Spitzer Space Telescope in the Surveying the Agents of a Galaxy's Evolution (SAGE) survey, these agents being the interstellar medium (ISM) and stars in the LMC. This paper provides an overview of the SAGE Legacy project, including observing strategy, data processing, and initial results. Three key science goals determined the coverage and depth of the survey. The detection of diffuse ISM with column densities >1.2 × 10^(21) H cm^(-2) permits detailed studies of dust processes in the ISM. SAGE's point-source sensitivity enables a complete census of newly formed stars with masses >3 M_☉ that will determine the current star formation rate in the LMC. SAGE's detection of evolved stars with mass-loss rates >1 × 10^(-8) M_☉ yr^(-1) will quantify the rate at which evolved stars inject mass into the ISM of the LMC. The observing strategy includes two epochs in 2005, separated by 3 months, that both mitigate instrumental artifacts and constrain source variability. The SAGE data are nonproprietary. The data processing includes IRAC and MIPS pipelines and a database for mining the point-source catalogs, which will be released to the community in support of Spitzer proposal cycles 4 and 5. We present initial results on the epoch 1 data for a region near N79 and N83. The MIPS 70 and 160 μm images of the diffuse dust emission of the N79/N83 region reveal a similar distribution to the gas emissions, especially the H I 21 cm emission. The measured point-source sensitivity for the epoch 1 data is consistent with expectations for the survey. The point-source counts are highest for the IRAC 3.6 μm band and decrease dramatically toward longer wavelengths, consistent with the fact that stars dominate the point-source catalogs and the dusty objects detected at the longer wavelengths are rare in comparison. The SAGE epoch 1 point-source catalog has ~4 × 10^6 sources, and more are anticipated when the epoch 1 and 2 data are combined. Using Milky Way (MW) templates as a guide, we adopt a simplified point-source classification to identify three candidate groups—stars without dust, dusty evolved stars, and young stellar objects—that offer a starting point for this work. We outline a strategy for identifying foreground MW stars, which may comprise as much as 18% of the source list, and background galaxies, which may comprise ~12% of the source list.

779 citations


Journal ArticleDOI
TL;DR: Huete et al. as discussed by the authors analyzed Amazon vegetation phenology at multiple scales with MODIS satellite measurements from 2000 to 2005, and found that canopy photosynthesis measured from eddy flux towers in both a rainforest and forest conversion site confirm their interpretation of satellite data, and suggest that basinwide carbon fluxes can be constrained by integrating remote sensing and local flux measurements.
Abstract: Received 23 December 2005; revised 6 February 2006; accepted 8 February 2006; published 22 March 2006. [1] Metabolism and phenology of Amazon rainforests significantly influence global dynamics of climate, carbon and water, but remain poorly understood. We analyzed Amazon vegetation phenology at multiple scales with Moderate Resolution Imaging Spectroradiometer (MODIS) satellite measurements from 2000 to 2005. MODIS Enhanced Vegetation Index (EVI, an index of canopy photosynthetic capacity) increased by 25% with sunlight during the dry season across Amazon forests, opposite to ecosystem model predictions that water limitation should cause dry season declines in forest canopy photosynthesis. In contrast to intact forests, areas converted to pasture showed dry-season declines in EVI-derived photosynthetic capacity, presumably because removal of deep-rooted forest trees reduced access to deep soil water. Local canopy photosynthesis measured from eddy flux towers in both a rainforest and forest conversion site confirm our interpretation of satellite data, and suggest that basin-wide carbon fluxes can be constrained by integrating remote sensing and local flux measurements. Citation: Huete, A. R., K. Didan, Y. E. Shimabukuro, P. Ratana, S. R. Saleska, L. R. Hutyra, W. Yang, R. R. Nemani, and R. Myneni (2006), Amazon rainforests green-up with sunlight in dry season, Geophys. Res. Lett., 33, L06405, doi:10.1029/2005GL025583.

741 citations


Proceedings ArticleDOI
02 Mar 2006
TL;DR: In this article, the authors describe an effort to identify common metrics for task-oriented human-robot interaction (HRI) and discuss the need for a toolkit of HRI metrics.
Abstract: This paper describes an effort to identify common metrics for task-oriented human-robot interaction (HRI). We begin by discussing the need for a toolkit of HRI metrics. We then describe the framework of our work and identify important biasing factors that must be taken into consideration. Finally, we present suggested common metrics for standardization and a case study. Preparation of a larger, more detailed toolkit is in progress.

721 citations


Journal ArticleDOI
TL;DR: In this paper, the authors show that the surface enrichment is the result of a minor amount of transport and deposition by aqueous processes on the surface of olivine-bearing basalts.
Abstract: Spirit landed on the floor of Gusev Crater and conducted initial operations on soil covered, rock-strewn cratered plains underlain by olivine-bearing basalts. Plains surface rocks are covered by wind-blown dust and show evidence for surface enrichment of soluble species as vein and void-filling materials and coatings. The surface enrichment is the result of a minor amount of transport and deposition by aqueous processes. Layered granular deposits were discovered in the Columbia Hills, with outcrops that tend to dip conformably with the topography. The granular rocks are interpreted to be volcanic ash and/or impact ejecta deposits that have been modified by aqueous fluids during and/or after emplacement. Soils consist of basaltic deposits that are weakly cohesive, relatively poorly sorted, and covered by a veneer of wind blown dust. The soils have been homogenized by wind transport over at least the several kilometer length scale traversed by the rover. Mobilization of soluble species has occurred within at least two soil deposits examined. The presence of mono-layers of coarse sand on wind-blown bedforms, together with even spacing of granule-sized surface clasts, suggest that some of the soil surfaces encountered by Spirit have not been modified by wind for some time. On the other hand, dust deposits on the surface and rover deck have changed during the course of the mission. Detection of dust devils, monitoring of the dust opacity and lower boundary layer, and coordinated experiments with orbiters provided new insights into atmosphere-surface dynamics.

647 citations


Journal ArticleDOI
TL;DR: In this paper, a single-particle soot photometer (SP2) was used on a NASA WB-57F high-altitude research aircraft in November 2004 from Houston, Texas.
Abstract: A single-particle soot photometer (SP2) was flown on a NASA WB-57F high-altitude research aircraft in November 2004 from Houston, Texas. The SP2 uses laser-induced incandescence to detect individual black carbon (BC) particles in an air sample in the mass range of $3-300 fg ($0.15-0.7 mm volume equivalent diameter). Scattered light is used to size the remaining non-BC aerosols in the range of $0.17-0.7 mm diameter. We present profiles of both aerosol types from the boundary layer to the lower stratosphere from two midlatitude flights. Results for total aerosol amounts in the size range detected by the SP2 are in good agreement with typical particle spectrometer measurements in the same region. All ambient incandescing particles were identified as BC because their incandescence properties matched those of laboratory-generated BC aerosol. Approximately 40% of these BC particles showed evidence of internal mixing (e.g., coating). Throughout profiles between 5 and 18.7 km, BC particles were less than a few percent of total aerosol number, and black carbon aerosol (BCA) mass mixing ratio showed a constant gradient with altitude above 5 km. SP2 data was compared to results from the ECHAM4/MADE and LmDzT-INCA global aerosol models. The comparison will help resolve the important systematic differences in model aerosol processes that determine BCA loadings. Further intercomparisons of models and measurements as presented here will improve the accuracy of the radiative forcing contribution from BCA.

628 citations


Journal ArticleDOI
15 Dec 2006-Science
TL;DR: The presence of deuterium and nitrogen-15 excesses suggest that some organics have an interstellar/protostellar heritage and a diverse suite of organic compounds is present and identifiable within the returned samples.
Abstract: Organics found in comet 81P/Wild 2 samples show a heterogeneous and unequilibrated distribution in abundance and composition. Some organics are similar, but not identical, to those in interplanetary dust particles and carbonaceous meteorites. A class of aromatic-poor organic material is also present. The organics are rich in oxygen and nitrogen compared with meteoritic organics. Aromatic compounds are present, but the samples tend to be relatively poorer in aromatics than are meteorites and interplanetary dust particles. The presence of deuterium and nitrogen-15 excesses suggest that some organics have an interstellar/protostellar heritage. Although the variable extent of modification of these materials by impact capture is not yet fully constrained, a diverse suite of organic compounds is present and identifiable within the returned samples.

547 citations


Journal ArticleDOI
TL;DR: A new, high-order, conservative, and efficient method for conservation laws on unstructured grids is developed, which is much simpler than the discontinuous Galerkin and spectral volume methods for un Structured grids.

513 citations


Journal ArticleDOI
TL;DR: Carbon nanotubes (CNTs) are among the most explored one-dimensional nanostructures and have attracted tremendous interest from fundamental science and technological perspectives as mentioned in this paper.
Abstract: Carbon nanotubes (CNTs) are amongst the most explored one-dimensional nanostructures and have attracted tremendous interest from fundamental science and technological perspectives. Albeit topologically simple, they exhibit a rich variety of intriguing electronic properties, such as metallic and semiconducting behaviour. Furthermore, these structures are atomically precise, meaning that each carbon atom is still three-fold coordinated without any dangling bonds. CNTs have been used in many laboratories to build prototype nanodevices. These devices include metallic wires, field-effect transistors, electromechanical sensors and displays. They potentially form the basis of future all-carbon electronics.This review deals with the building blocks of understanding the device physics of CNT-based nanodevices. There are many features that make CNTs different from traditional materials, including chirality-dependent electronic properties, the one-dimensional nature of electrostatic screening and the presence of several direct bandgaps. Understanding these novel properties and their impact on devices is crucial in the development and evolution of CNT applications.

Journal ArticleDOI
TL;DR: The biological complexity of the mat far exceeds that observed in other polysaccharide-rich microbial ecosystems, such as the human and mouse distal guts, and suggests that positive feedbacks exist between chemical complexity and biological diversity.
Abstract: We applied nucleic acid-based molecular methods, combined with estimates of biomass (ATP), pigments, and microelectrode measurements of chemical gradients, to map microbial diversity vertically on a millimeter scale in a hypersaline microbial mat from Guerrero Negro, Baja California Sur, Mexico. To identify the constituents of the mat, small-subunit rRNA genes were amplified by PCR from community genomic DNA extracted from layers, cloned, and sequenced. Bacteria dominated the mat and displayed unexpected and unprecedented diversity. The majority (1,336) of the 1,586 bacterial 16S rRNA sequences generated were unique, representing 752 species (≥97% rRNA sequence identity) in 42 of the main bacterial phyla, including 15 novel candidate phyla. The diversity of the mat samples differentiated according to the chemical milieu defined by concentrations of O2 and H2S. Bacteria of the phylum Chloroflexi formed the majority of the biomass by percentage of bulk rRNA and of clones in rRNA gene libraries. This result contradicts the general belief that cyanobacteria dominate these communities. Although cyanobacteria constituted a large fraction of the biomass in the upper few millimeters (>80% of the total rRNA and photosynthetic pigments), Chloroflexi sequences were conspicuous throughout the mat. Filamentous Chloroflexi bacteria were identified by fluorescence in situ hybridization within the polysaccharide sheaths of the prominent cyanobacterium Microcoleus chthonoplastes, in addition to free living in the mat. The biological complexity of the mat far exceeds that observed in other polysaccharide-rich microbial ecosystems, such as the human and mouse distal guts, and suggests that positive feedbacks exist between chemical complexity and biological diversity.

Journal ArticleDOI
TL;DR: In this paper, the authors compared surface meteorological data sets from three well-documented global reanalyses, NASA Data Assimilation Office (DAO), European Centre for Medium-Range Weather Forecasts (ECMWF) (ERA-40) and National Centers for Environmental Prediction/National Center for Atmospheric Research (NCEP/NCAR) reanalysis 1, with observed weather station data and other gridded data interpolated from the observations, to evaluate the sensitivity of MODIS global terrestrial gross and net primary production (GPP and NPP) to the uncertainties of meteor
Abstract: [1] The Moderate Resolution Imaging Spectroradiometer (MODIS) on board NASA's satellites, Terra and Aqua, dramatically improves our ability to accurately and continuously monitor the terrestrial biosphere. MODIS information is used to estimate global terrestrial primary production weekly and annually in near-real time at a 1-km resolution. MODIS terrestrial primary production requires daily gridded assimilation meteorological data as inputs, and the accuracy of the existing meteorological reanalysis data sets show marked differences both spatially and temporally. This study compares surface meteorological data sets from three well-documented global reanalyses, NASA Data Assimilation Office (DAO), European Centre for Medium-Range Weather Forecasts (ECMWF) (ERA-40) and National Centers for Environmental Prediction/National Center for Atmospheric Research (NCEP/NCAR) reanalysis 1, with observed weather station data and other gridded data interpolated from the observations, to evaluate the sensitivity of MODIS global terrestrial gross and net primary production (GPP and NPP) to the uncertainties of meteorological inputs both in the United States and the global vegetated areas. NCEP tends to overestimate surface solar radiation, and underestimate both temperature and vapor pressure deficit (VPD). ECMWF has the highest accuracy but its radiation is lower in tropical regions, and the accuracy of DAO lies between NCEP and ECMWF. Biases in temperature are mainly responsible for large VPD biases in reanalyses. MODIS NPP contains more uncertainties than GPP. Global total MODIS GPP and NPP driven by DAO, ECMWF, and NCEP show notable differences (>20 Pg C/yr) with the highest estimates from NCEP and the lowest from ECMWF. Again, the DAO results lie somewhere between NCEP and ECMWF estimates. Spatially, the larger discrepancies among reanalyses and their derived MODIS GPP and NPP occur in the tropics. These results reveal that the biases in meteorological reanalyses can introduce substantial error into GPP and NPP estimations, and emphasize the need to minimize these biases to improve the quality of MODIS GPP and NPP products.

Journal ArticleDOI
20 Jan 2006-Science
TL;DR: High-resolution climate simulations performed with a model designed to simulate the present-day Mars water cycle but assuming a 45° obliquity points to an atmospheric origin for the ice and reveals how precipitation could have formed glaciers on Mars.
Abstract: Surface conditions on Mars are currently cold and dry, with water ice unstable on the surface except near the poles. However, geologically recent glacierlike landforms have been identified in the tropics and the midlatitudes of Mars. The ice has been proposed to originate from either a subsurface reservoir or the atmosphere. We present high-resolution climate simulations performed with a model designed to simulate the present-day Mars water cycle but assuming a 45° obliquity as experienced by Mars a few million years ago. The model predicts ice accumulation in regions where glacier landforms are observed, on the western flanks of the great volcanoes and in the eastern Hellas region. This agreement points to an atmospheric origin for the ice and reveals how precipitation could have formed glaciers on Mars.

Journal ArticleDOI
01 Mar 2006-Icarus
TL;DR: In this article, the authors present a model which tracks how the distribution of water changes in an evolving disk as the waterbearing species experience condensation, accretion, transport, collisional destruction, and vaporization.

Journal ArticleDOI
TL;DR: In this paper, the relative amounts of fine-structure line emission from the ionized gas (H II) and/or associated neutral gas (PDRs) in massive star-forming regions were investigated.
Abstract: We calculate the [Si II] 34.8 μm, [Fe II] 26.0 μm, and [C II] 158 μm infrared fine-structure emission that may arise from ionized gas (H II regions) and/or associated neutral gas (photodissociation regions [PDRs]) in massive star-forming regions. Assuming thermal pressure balance between an H II region and a PDR, the relative amounts of fine-structure line emission from the H II region and PDR depend on the electron density and resulting thermal pressure in the H II region, gas-phase abundances of the emitting species, and the UV spectrum from the stellar population producing the H II region. For normal metallicity, we find that [C II] emission is always dominated by PDRs, while [Si II] and [Fe II] are dominated by PDRs for H II regions with electron density ne 10 cm-3. We also calculate the H2 0-0 S(0), 0-0 S(1), 0-0 S(2), and 0-0 S(3) pure rotational line emission arising from the PDR at the atomic-to-molecular interface. The overall intensity of the H2 line emission directly traces warm molecular mass, while H2 line ratios constrain the PDR temperature, gas density, and far-ultraviolet field strength. Models of the integrated emission of [Si II], [Fe II], [C II], and H2 from Galactic and extragalactic star-forming regions are presented for use in interpreting observations with Spitzer, ISO, SOFIA, and the Herschel Space Observatory. We compare our results with observations of the Galactic source NGC 2023 (an individual H II/photodissociation region in Orion), the inner regions of the Milky Way, and the central regions of the nearby star-forming spiral galaxy NGC 7331. We also compare our results with recently published similar work by Abel and coworkers.

Journal ArticleDOI
TL;DR: The findings suggest that photosynthetic life is extremely unlikely on the present-day surface of Mars, but may have existed in the past, if so, such microhabitats would probably be widely dispersed, difficult to detect, and millimeters away from virtually lifeless surroundings.
Abstract: The occurrence of hypolithic cyanobacteria colonizing translucent stones was quantified along the aridity gradient in the Atacama Desert in Chile, from less arid areas to the hyperarid core where photosynthetic life and thus primary production reach their limits. As mean rainfall declines from 21 to ≤2 mm year−1, the abundance of hypolithic cyanobacteria drops from 28 to <0.1%, molecular diversity declines threefold, and organic carbon residence times increase by three orders of magnitude. Communities contained a single Chroococcidiopsis morphospecies with heterotrophic associates, yet molecular analysis revealed that each stone supported a number of unique 16S rRNA gene-defined genotypes. A fivefold increase in steady-state residence times for organic carbon within communities in the hyperarid core (3200 years turnover time) indicates a significant decline in biological carbon cycling. Six years of microclimate data suggest that the dry limit corresponds to ≤5 mm year−1 rainfall and/or decadal periods of no rain, with <75 h year−1 of liquid water available to cyanobacteria under light conditions suitable for photosynthesis. In the hyperarid core, hypolithic cyanobacteria are rare and exist in small spatially isolated islands amidst a microbially depauperate bare soil. These findings suggest that photosynthetic life is extremely unlikely on the present-day surface of Mars, but may have existed in the past. If so, such microhabitats would probably be widely dispersed, difficult to detect, and millimeters away from virtually lifeless surroundings.

Journal ArticleDOI
TL;DR: This paper summarizes the experience of several collaborating investigators on validation of MODIS LAI products and suggests three key factors that influence the accuracy of LAI retrievals that are suggested from the model used to build the look-up tables accompanying the algorithm.
Abstract: Global products of vegetation green Leaf Area Index (LAI) and Fraction of Photosynthetically Active Radiation absorbed by vegetation (FPAR) are being operationally produced from Terra and Aqua Moderate Resolution Imaging Spectroradiometers (MODIS) at 1-km resolution and eight-day frequency. This paper summarizes the experience of several collaborating investigators on validation of MODIS LAI products and demonstrates the close connection between product validation and algorithm refinement activities. The validation of moderate resolution LAI products includes three steps: 1) field sampling representative of LAI spatial distribution and dynamic range within each major land cover type at the validation site; 2) development of a transfer function between field LAI measurements and high resolution satellite data to generate a reference LAI map over an extended area; and 3) comparison of MODIS LAI with aggregated reference LAI map at patch (multipixel) scale in view of geo-location and pixel shift uncertainties. The MODIS LAI validation experiences, summarized here, suggest three key factors that influence the accuracy of LAI retrievals: 1) uncertainties in input land cover data, 2) uncertainties in input surface reflectances, and 3) uncertainties from the model used to build the look-up tables accompanying the algorithm. This strategy of validation efforts guiding algorithm refinements has led to progressively more accurate LAI products from the MODIS sensors aboard NASA's Terra and Aqua platforms

Journal ArticleDOI
TL;DR: A review of the current state of knowledge surrounding the oxygen requirement for steroid biosynthesis and phylogenetic patterns in the distribution of steroid and triterpenoid biosynthetic pathways indicates that an ancestral anaerobic pathway is highly unlikely.
Abstract: There is a close connection between modern-day biosynthesis of particular triterpenoid biomarkers and presence of molecular oxygen in the environment. Thus, the detection of steroid and triterpenoi...

Journal ArticleDOI
TL;DR: In this paper, the authors constructed two extinction curves from 1.25 to 25 μm using near-IR extinction measurements from the literature, along with the silicate profiles of WR 98a and GCS 3.
Abstract: We have analyzed the 9.7 and "18" μm interstellar silicate absorption features along the line of sight toward four heavily extincted galactic WC-type Wolf-Rayet (WR) stars. We construct two interstellar extinction curves from 1.25 to 25 μm using near-IR extinction measurements from the literature, along with the silicate profiles of WR 98a (representing the local ISM) and GCS 3 (representing the Galactic center). We have investigated the mineralogy of the interstellar silicates by comparing extinction profiles for amorphous silicates with olivine and pyroxene stoichiometry to the 9.7 and "18" μm absorption features in the WR 98a spectrum. In this analysis, we have considered solid and porous spheres and a continuous distribution of ellipsoids. While it is not possible to simultaneously provide a perfect match to both profiles, we find that the best match requires a mixture of these two types of compounds. We also consider iron oxides, aluminosilicates, and silicate carbide (SiC) as grain components. Iron oxides cannot be accommodated in the observed spectrum, while the amount of Si in SiC is limited to <4%. Finally, we discuss the cosmic elemental abundance constraints on the silicate mineralogy, grain shape, and porosity.

Journal ArticleDOI
TL;DR: In this article, the authors describe and evaluate a parameterization to include the vertical transport of hot gases and particles emitted from biomass burning in low-resolution atmospheric-chemistry transport models, which is simulated by embedding a 1D cloud-resolving model with appropriate lower boundary conditions in each column of the 3D host model.
Abstract: We describe and begin to evaluate a parameterization to include the vertical transport of hot gases and particles emitted from biomass burning in low resolution atmospheric-chemistry transport models. This sub-grid transport mechanism is simulated by embedding a 1-D cloud-resolving model with appropriate lower boundary conditions in each column of the 3-D host model. Through assimilation of remote sensing fire products, we recognize which columns have fires. Using a land use dataset appropriate fire properties are selected. The host model provides the environmental conditions, allowing the plume rise to be simulated explicitly. The derived height of the plume is then used in the source emission field of the host model to determine the effective injection height, releasing the material emitted during the flaming phase at this height. Model results are compared with CO aircraft profiles from an Amazon basin field campaign and with satellite data, showing the huge impact that this mechanism has on model performance. We also show the relative role of each main vertical transport mechanisms, shallow and deep moist convection and the pyro-convection (dry or moist) induced by vegetation fires, on the distribution of biomass burning CO emissions in the troposphere.

Journal ArticleDOI
TL;DR: The petrology and mineral chemistry of an ophiolite-hosted cold spring in northern California is described and criteria to aid in the identification of serpentinizing terranes on Mars that have the potential to harbor chemosynthetic life are proposed.
Abstract: Ophiolites, sections of ocean crust tectonically displaced onto land, offer significant potential to support chemolithoautotrophic life through the provision of energy and reducing power during aqueous alteration of their highly reduced mineralogies. There is substantial chemical disequilibrium between the primary olivine and pyroxene mineralogy of these ophiolites and the fluids circulating through them. This disequilibrium represents a potential source of chemical energy that could sustain life. Moreover, E h–pH conditions resulting from rock– water interactions in ultrabasic rocks are conducive to important abiotic processes antecedent to the origin of life. Serpentinization—the reaction of olivine- and pyroxene-rich rocks with water—produces magnetite, hydroxide, and serpentine minerals, and liberates molecular hydrogen, a source of energy and electrons that can be readily utilized by a broad array of chemosynthetic organisms. These systems are viewed as important analogs for potential early ecosystem...

Journal ArticleDOI
TL;DR: In this paper, a 1-D numerical model was used to study the atmospheric photochemistry of oxygen, methane, and sulfur after the advent of oxygenic photosynthesis, and it was shown that the disappearance of a strong MIF sulfur signature at the beginning of the Proterozoic is better explained by the collapse of atmospheric methane, rather than by a failure of volcanism or the rise of oxygen.
Abstract: We use a 1-D numerical model to study the atmospheric photochemistry of oxygen, methane, and sulfur after the advent of oxygenic photosynthesis. We assume that mass-independent fractionation (MIF) of sulfur isotopes – characteristic of the Archean – was best preserved in sediments when insoluble elemental sulfur (S8) was an important product of atmospheric photochemistry. Efficient S8 production requires three things: (i) very low levels of tropospheric O2; (ii) a source of sulfur gases to the atmosphere at least as large as the volcanic SO2 source today; and (iii) a sufficiently high abundance of methane or other reduced gas. All three requirements must be met. We suggest that the disappearance of a strong MIF sulfur signature at the beginning of the Proterozoic is better explained by the collapse of atmospheric methane, rather than by a failure of volcanism or the rise of oxygen. The photochemical models are consistent in demanding that methane decline before O2 can rise (although they are silent as to how quickly), and the collapse of a methane greenhouse effect is consistent with the onset of major ice ages immediately following the disappearance of MIF sulfur. We attribute the decline of methane to the growth of the oceanic sulfate pool as indicated by the widening envelope of mass-dependent sulfur fractionation through the Archean. We find that a given level of biological forcing can support either oxic or anoxic atmospheres, and that the transition between the anoxic state and the oxic state is inhibited by high levels of atmospheric methane. Transition from an oxygen-poor to an oxygen-rich atmosphere occurs most easily when methane levels are low, which suggests that the collapse of methane not only caused the end of MIF S and major ice ages, but it may also have enabled the rise of O2. In this story the early Proterozoic ice ages were ended by the establishment of a stable oxic atmosphere, which protected a renewed methane greenhouse with an ozone shield.

Journal ArticleDOI
19 Jun 2006
TL;DR: Two electroencephalogram (EEG)-based brain-computer interfaces (BCI) for users to control a cursor on a computer display using an adaptive algorithm to associate patterns in multichannel EEG frequency spectra with cursor controls are developed and tested.
Abstract: We have developed and tested two electroencephalogram (EEG)-based brain-computer interfaces (BCI) for users to control a cursor on a computer display. Our system uses an adaptive algorithm, based on kernel partial least squares classification (KPLS), to associate patterns in multichannel EEG frequency spectra with cursor controls. Our first BCI, Target Practice, is a system for one-dimensional device control, in which participants use biofeedback to learn voluntary control of their EEG spectra. Target Practice uses a KPLS classifier to map power spectra of 62-electrode EEG signals to rightward or leftward position of a moving cursor on a computer display. Three subjects learned to control motion of a cursor on a video display in multiple blocks of 60 trials over periods of up to six weeks. The best subject's average skill in correct selection of the cursor direction grew from 58% to 88% after 13 training sessions. Target Practice also implements online control of two artifact sources: 1) removal of ocular artifact by linear subtraction of wavelet-smoothed vertical and horizontal electrooculograms (EOG) signals, 2) control of muscle artifact by inhibition of BCI training during periods of relatively high power in the 40-64 Hz band. The second BCI, Think Pointer, is a system for two-dimensional cursor control. Steady-state visual evoked potentials (SSVEP) are triggered by four flickering checkerboard stimuli located in narrow strips at each edge of the display. The user attends to one of the four beacons to initiate motion in the desired direction. The SSVEP signals are recorded from 12 electrodes located over the occipital region. A KPLS classifier is individually calibrated to map multichannel frequency bands of the SSVEP signals to right-left or up-down motion of a cursor on a computer display. The display stops moving when the user attends to a central fixation point. As for Target Practice, Think Pointer also implements wavelet-based online removal of ocular artifact; however, in Think Pointer muscle artifact is controlled via adaptive normalization of the SSVEP. Training of the classifier requires about 3 min. We have tested our system in real-time operation in three human subjects. Across subjects and sessions, control accuracy ranged from 80% to 100% correct with lags of 1-5 s for movement initiation and turning. We have also developed a realistic demonstration of our system for control of a moving map display (http://ti.arc.nasa.gov/).

Journal ArticleDOI
TL;DR: Olivine-phyric shergottites are similar in many respects to certain Martian meteorites (olivine-phyllithm pyroxenes) and share minor element trends, reflected in their nickelmagnesium and chromium-magnesium ratios as discussed by the authors.
Abstract: Rocks on the floor of Gusev crater are basalts of uniform composition and mineralogy. Olivine, the only mineral to have been identified or inferred from data by all instruments on the Spirit rover, is especially abundant in these rocks. These picritic basalts are similar in many respects to certain Martian meteorites (olivine-phyric shergottites). The olivine megacrysts in both have intermediate compositions, with modal abundances ranging up to 20-30%. Associated minerals in both include low-calcium and high-calcium pyroxenes, plagioclase of intermediate composition, iron-titanium-chromium oxides, and phosphate. These rocks also share minor element trends, reflected in their nickel-magnesium and chromium-magnesium ratios. Gusev basalts and shergottites appear to have formed from primitive magmas produced by melting an undepleted mantle at depth and erupted without significant fractionation. However, apparent differences between Gusev rocks and shergottites in their ages, plagioclase abundances, and volatile contents preclude direct correlation. Orbital determinations of global olivine distribution and compositions by thermal emission spectroscopy suggest that olivine-rich rocks may be widespread. Because weathering under acidic conditions preferentially attacks olivine and disguises such rocks beneath alteration rinds, picritic basalts formed from primitive magmas may even be a common component of the Martian crust formed during ancient and recent times.

Journal ArticleDOI
TL;DR: In this article, the Wolf-Rayet binary fraction is high (>62%), on the basis of dust emission from WC stars, in addition to a significant WN binary fraction from hard X-ray detections according to Clark et al. The observed ratio of WR stars to red and yellow hypergiants, N(WR)/N(RSG+YHG)� 3, favours an age of�4.5-5.0 Myr, with individual Wolf-rayet stars descended from progenitors of initial mass of 40 55M⊙.
Abstract: New NTT/SOFI imaging and spectroscopy of the Wolf-Rayet population in Westerlund 1 are presented. Narrow-band near-IR imaging together with follow up spectroscopy reveals four new Wolf-Rayet stars, of which three were independently identified recently by Groh et al., bringing the confirmed Wolf-Rayet content to 24 (23 excludin g source S) ‐ representing 8% of the known Galactic Wolf-Rayet population ‐ comprising 8 WC stars and 16 (15) WN stars. Revised coordinates and near-IR photometry are presented, whilst a quantitative nearIR spectral classification scheme for Wolf-Rayet stars is pr esented and applied to members of Westerlund 1. Late subtypes are dominant, with no subtypes earlier than WN5 or WC8 for the nitrogen and carbon sequences, respectively. A qualitative inspection of the WN stars suggests that most (�75%) are highly H-deficient. The Wolf-Rayet binary fraction is high (>62%), on the basis of dust emission from WC stars, in addition to a significant WN binary fraction from hard X-ray detections according to Clark et al. We exploit the large WN population of Westerlund 1 to reassess its distance (�5.0 kpc) and extinction (AKS � 0.96 mag), such that it is located at the edge of the Galactic bar, with an oxygen metallicity �60% higher than Orion. The observed ratio of WR stars to red and yellow hypergiants, N(WR)/N(RSG+YHG)� 3, favours an age of�4.5‐5.0 Myr, with individual Wolf-Rayet stars descended from progenitors of initial mass � 40 55M⊙. Qualitative estimates of current masses for non-dusty, H-free WR stars are presented, revealing 10 18M⊙, such that �75% of the initial stellar mass has been removed via stellar winds or close binary evolution. We present a revision to the cluster turn-off mass for other Milky Way clusters in which Wolf-Rayet stars are known, based upon the latest temperature calibration for OB stars. Finally, c omparisons between the observed WR population and subtype distribution in Westerlund 1 and instantaneous burst evolutionary synthesis models are presented.

Journal ArticleDOI
TL;DR: In the summer of 2004 several separate field programs intensively studied the photochemical, heterogeneous chemical and radiative environment of the troposphere over North America, the North Atlantic Ocean, and western Europe as mentioned in this paper.
Abstract: In the summer of 2004 several separate field programs intensively studied the photochemical, heterogeneous chemical and radiative environment of the troposphere over North America, the North Atlantic Ocean, and western Europe. Previous studies have indicated that the transport of continental emissions, particularly from North America, influences the concentrations of trace species in the troposphere over the North Atlantic and Europe. An international team of scientists, representing over 100 laboratories, collaborated under the International Consortium for Atmospheric Research on Transport and Transformation (ICARTT) umbrella to coordinate the separate field programs in order to maximize the resulting advances in our understanding of regional air quality, the transport, chemical transformation and removal of aerosols, ozone, and their precursors during intercontinental transport, and the radiation balance of the troposphere. Participants utilized nine aircraft, one research vessel, several ground-based sites in North America and the Azores, a network of aerosol-ozone lidars in Europe, satellites, balloon borne sondes, and routine commercial aircraft measurements. In this special section, the results from a major fraction of those platforms are presented. This overview is aimed at providing operational and logistical information for those platforms, summarizing the principal findings and conclusions that have been drawn from the results, and directing readers to specific papers for further details.

Proceedings ArticleDOI
08 Jul 2006
TL;DR: The Age-Layered Population Structure (ALPS) as mentioned in this paper was proposed to reduce the problem of premature convergence by introducing new, randomly generated individuals in the youngest layer at regular intervals, which results in an EA that is always exploring new parts of the fitness landscape.
Abstract: To reduce the problem of premature convergence we define a new method for measuring an individual's age and propose the Age-Layered Population Structure (ALPS). This new measure of age measures how long the genetic material has been evolving in the population: offspring start with an age of 1 plus the age of their oldest parent instead of starting with an age of 0 as with traditional measures of age. ALPS differs from a typical evolutionary algorithm (EA) by segregating individuals into different age-layers by their age and by regularly introducing new, randomly generated individuals in the youngest layer. The introduction of randomly generated individuals at regular intervals results in an EA that is never completely converged and is always exploring new parts of the fitness landscape. By using age to restrict competition and breeding, younger individuals are able to develop without being dominated by older ones. Analysis of the search behavior of ALPS finds that the offspring of individuals that are randomly generated mid-way through a run are able to move the population out of mediocre local-optima to better parts of the fitness landscape. In comparison against a traditional EA, a multi-start EA and two other EAs with diversity maintenance schemes we find that ALPS produces significantly better designs with a higher reliability than the other EAs.

Journal ArticleDOI
10 Mar 2006-Science
TL;DR: Observations of Saturn's satellite Enceladus using Cassini's Visual and Infrared Mapping Spectrometer instrument were obtained during three flybys in 2005, and upper limits of 140 kelvin are derived for the temperatures in the tiger stripes.
Abstract: Observations of Saturn9s satellite Enceladus using Cassini9s Visual and Infrared Mapping Spectrometer instrument were obtained during three flybys of Enceladus in 2005. Enceladus9 surface is composed mostly of nearly pure water ice except near its south pole, where there are light organics, CO 2 , and amorphous and crystalline water ice, particularly in the region dubbed the “tiger stripes.” An upper limit of 5 precipitable nanometers is derived for CO in the atmospheric column above Enceladus, and 2% for NH 3 in global surface deposits. Upper limits of 140 kelvin (for a filled pixel) are derived for the temperatures in the tiger stripes.

Journal ArticleDOI
TL;DR: The INTEX-A field mission was conducted in the summer of 2004 (1 July to 15 August 2004) over North America (NA) and the Atlantic in cooperation with multiple national and international partners as part of a consortium called ICARTT as mentioned in this paper.
Abstract: [1] The INTEX-A field mission was conducted in the summer of 2004 (1 July to 15 August 2004) over North America (NA) and the Atlantic in cooperation with multiple national and international partners as part of a consortium called ICARTT. The main goals of INTEX-A were to (1) characterize the composition of the troposphere over NA, (2) characterize the outflow of pollution from NA and determine its chemical evolution during transatlantic transport, (3) validate satellite observations of tropospheric composition, (4) quantitatively relate atmospheric concentrations of gases and aerosols with their sources and sinks, and (5) investigate aerosol properties and their radiative effects. INTEX-A primarily relied on instrumented DC-8 and J-31 aircraft platforms to achieve its objectives. The DC-8 was equipped to measure detailed gas and aerosol composition and provided sufficient range and altitude capability to coordinate activities with distant partners and to sample the entire midlatitude troposphere. The J-31 was specifically focused on radiative effects of clouds and aerosols and operated largely in the Gulf of Maine. Satellite products along with meteorological and 3-D chemical transport model forecasts were integrated into the flight planning process. Intercomparisons were performed to quantify the accuracy of data and to create a unified data set. Satellite validation activities principally focused on Terra (MOPITT, MODIS, and MISR), Aqua (AIRS and MODIS) and Envisat (SCIAMACHY) to validate observations of CO, NO2, HCHO, H2O, and aerosol. Persistent fires in Alaska and NW Canada offered opportunities to quantify emissions from fires and study the transport and evolution of biomass burning plumes. Contrary to expectations, several pollution plumes of Asian origin, frequently mixed with stratospheric air, were sampled over NA. Quasi-Lagrangian sampling was successfully carried out to study chemical aging of plumes during transport over the Atlantic. Lightning NOx source was found to be far larger than anticipated and provided a major source of error in model simulations. The composition of the upper troposphere was significantly perturbed by influences from surface pollution and lightning. Drawdown of CO2 was characterized over NA and its atmospheric abundance related to terrestrial sources and sinks. INTEX-A observations provide a comprehensive data set to test models and evaluate major pathways of pollution transport over NA and the Atlantic. This overview provides a context within which the present and future INTEX-A/ICARTT publications can be understood.