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Showing papers by "California Institute of Technology published in 2001"


Journal ArticleDOI
J. Craig Venter1, Mark Raymond Adams1, Eugene W. Myers1, Peter W. Li1  +269 moreInstitutions (12)
16 Feb 2001-Science
TL;DR: Comparative genomic analysis indicates vertebrate expansions of genes associated with neuronal function, with tissue-specific developmental regulation, and with the hemostasis and immune systems are indicated.
Abstract: A 2.91-billion base pair (bp) consensus sequence of the euchromatic portion of the human genome was generated by the whole-genome shotgun sequencing method. The 14.8-billion bp DNA sequence was generated over 9 months from 27,271,853 high-quality sequence reads (5.11-fold coverage of the genome) from both ends of plasmid clones made from the DNA of five individuals. Two assembly strategies-a whole-genome assembly and a regional chromosome assembly-were used, each combining sequence data from Celera and the publicly funded genome effort. The public data were shredded into 550-bp segments to create a 2.9-fold coverage of those genome regions that had been sequenced, without including biases inherent in the cloning and assembly procedure used by the publicly funded group. This brought the effective coverage in the assemblies to eightfold, reducing the number and size of gaps in the final assembly over what would be obtained with 5.11-fold coverage. The two assembly strategies yielded very similar results that largely agree with independent mapping data. The assemblies effectively cover the euchromatic regions of the human chromosomes. More than 90% of the genome is in scaffold assemblies of 100,000 bp or more, and 25% of the genome is in scaffolds of 10 million bp or larger. Analysis of the genome sequence revealed 26,588 protein-encoding transcripts for which there was strong corroborating evidence and an additional approximately 12,000 computationally derived genes with mouse matches or other weak supporting evidence. Although gene-dense clusters are obvious, almost half the genes are dispersed in low G+C sequence separated by large tracts of apparently noncoding sequence. Only 1.1% of the genome is spanned by exons, whereas 24% is in introns, with 75% of the genome being intergenic DNA. Duplications of segmental blocks, ranging in size up to chromosomal lengths, are abundant throughout the genome and reveal a complex evolutionary history. Comparative genomic analysis indicates vertebrate expansions of genes associated with neuronal function, with tissue-specific developmental regulation, and with the hemostasis and immune systems. DNA sequence comparisons between the consensus sequence and publicly funded genome data provided locations of 2.1 million single-nucleotide polymorphisms (SNPs). A random pair of human haploid genomes differed at a rate of 1 bp per 1250 on average, but there was marked heterogeneity in the level of polymorphism across the genome. Less than 1% of all SNPs resulted in variation in proteins, but the task of determining which SNPs have functional consequences remains an open challenge.

12,098 citations


Journal ArticleDOI
16 Nov 2001-Science
TL;DR: This review describes a new paradigm of electronics based on the spin degree of freedom of the electron, which has the potential advantages of nonvolatility, increased data processing speed, decreased electric power consumption, and increased integration densities compared with conventional semiconductor devices.
Abstract: This review describes a new paradigm of electronics based on the spin degree of freedom of the electron. Either adding the spin degree of freedom to conventional charge-based electronic devices or using the spin alone has the potential advantages of nonvolatility, increased data processing speed, decreased electric power consumption, and increased integration densities compared with conventional semiconductor devices. To successfully incorporate spins into existing semiconductor technology, one has to resolve technical issues such as efficient injection, transport, control and manipulation, and detection of spin polarization as well as spin-polarized currents. Recent advances in new materials engineering hold the promise of realizing spintronic devices in the near future. We review the current state of the spin-based devices, efforts in new materials fabrication, issues in spin transport, and optical spin manipulation.

9,917 citations


Journal ArticleDOI
TL;DR: Five important trends have emerged from recent work on computational models of focal visual attention that emphasize the bottom-up, image-based control of attentional deployment, providing a framework for a computational and neurobiological understanding of visual attention.
Abstract: Five important trends have emerged from recent work on computational models of focal visual attention that emphasize the bottom-up, image-based control of attentional deployment. First, the perceptual saliency of stimuli critically depends on the surrounding context. Second, a unique 'saliency map' that topographically encodes for stimulus conspicuity over the visual scene has proved to be an efficient and plausible bottom-up control strategy. Third, inhibition of return, the process by which the currently attended location is prevented from being attended again, is a crucial element of attentional deployment. Fourth, attention and eye movements tightly interplay, posing computational challenges with respect to the coordinate system used to control attention. And last, scene understanding and object recognition strongly constrain the selection of attended locations. Insights from these five key areas provide a framework for a computational and neurobiological understanding of visual attention.

4,485 citations


Journal ArticleDOI
TL;DR: In this paper, a force field for large-scale reactive chemical systems (1000s of atoms) is proposed. But the force field does not have Coulomb and Morse potentials to describe nonbond interactions between all atoms.
Abstract: To make practical the molecular dynamics simulation of large scale reactive chemical systems (1000s of atoms), we developed ReaxFF, a force field for reactive systems. ReaxFF uses a general relationship between bond distance and bond order on one hand and between bond order and bond energy on the other hand that leads to proper dissociation of bonds to separated atoms. Other valence terms present in the force field (angle and torsion) are defined in terms of the same bond orders so that all these terms go to zero smoothly as bonds break. In addition, ReaxFF has Coulomb and Morse (van der Waals) potentials to describe nonbond interactions between all atoms (no exclusions). These nonbond interactions are shielded at short range so that the Coulomb and van der Waals interactions become constant as Rij → 0. We report here the ReaxFF for hydrocarbons. The parameters were derived from quantum chemical calculations on bond dissociation and reactions of small molecules plus heat of formation and geometry data for...

4,455 citations


Journal ArticleDOI
TL;DR: In this paper, the final results of the Hubble Space Telescope (HST) Key Project to measure the Hubble constant are presented, and the results are based on a Cepheid calibration of several secondary distance methods applied over the range of about 60-400 Mpc.
Abstract: We present here the final results of the Hubble Space Telescope (HST) Key Project to measure the Hubble constant. We summarize our method, the results, and the uncertainties, tabulate our revised distances, and give the implications of these results for cosmology. Our results are based on a Cepheid calibration of several secondary distance methods applied over the range of about 60-400 Mpc. The analysis presented here benefits from a number of recent improvements and refinements, including (1) a larger LMC Cepheid sample to define the fiducial period-luminosity (PL) relations, (2) a more recent HST Wide Field and Planetary Camera 2 (WFPC2) photometric calibration, (3) a correction for Cepheid metallicity, and (4) a correction for incompleteness bias in the observed Cepheid PL samples. We adopt a distance modulus to the LMC (relative to which the more distant galaxies are measured) of μ0 = 18.50 ± 0.10 mag, or 50 kpc. New, revised distances are given for the 18 spiral galaxies for which Cepheids have been discovered as part of the Key Project, as well as for 13 additional galaxies with published Cepheid data. The new calibration results in a Cepheid distance to NGC 4258 in better agreement with the maser distance to this galaxy. Based on these revised Cepheid distances, we find values (in km s-1 Mpc-1) of H0 = 71 ± 2 ± 6 (systematic) (Type Ia supernovae), H0 = 71 ± 3 ± 7 (Tully-Fisher relation), H0 = 70 ± 5 ± 6 (surface brightness fluctuations), H0 = 72 ± 9 ± 7 (Type II supernovae), and H0 = 82 ± 6 ± 9 (fundamental plane). We combine these results for the different methods with three different weighting schemes, and find good agreement and consistency with H0 = 72 ± 8 km s-1 Mpc-1. Finally, we compare these results with other, global methods for measuring H0.

3,397 citations


Journal ArticleDOI
TL;DR: The discussion includes an analysis of trends in catalyst activity, a description of catalysts coordinated with N-heterocyclic carbene ligands, and an overview of ongoing work to improve the activity, stability, and selectivity of this family of L2X2Ru=CHR complexes.
Abstract: In recent years, the olefin metathesis reaction has attracted widespread attention as a versatile carbon−carbon bond-forming method. Many new applications have become possible because of major advances in catalyst design. State-of-the-art ruthenium catalysts are not only highly active but also compatible with most functional groups and easy to use. This Account traces the ideas and discoveries that were instrumental in the development of these catalysts, with particular emphasis on (PCy3)2Cl2RuCHPh and its derivatives. The discussion includes an analysis of trends in catalyst activity, a description of catalysts coordinated with N-heterocyclic carbene ligands, and an overview of ongoing work to improve the activity, stability, and selectivity of this family of L2X2RuCHR complexes.

3,229 citations


Journal ArticleDOI
TL;DR: The 2dF Galaxy Redshift Survey (2dFGRS) as mentioned in this paper uses the 2DF multifibre spectrograph on the Anglo-Australian Telescope, which is capable of observing 400 objects simultaneously over a 2° diameter field.
Abstract: The 2dF Galaxy Redshift Survey (2dFGRS) is designed to measure redshifts for approximately 250 000 galaxies. This paper describes the survey design, the spectroscopic observations, the redshift measurements and the survey data base. The 2dFGRS uses the 2dF multifibre spectrograph on the Anglo-Australian Telescope, which is capable of observing 400 objects simultaneously over a 2° diameter field. The source catalogue for the survey is a revised and extended version of the APM galaxy catalogue, and the targets are galaxies with extinction-corrected magnitudes brighter than b J = 19.45. The main survey regions are two declination strips, one in the southern Galactic hemisphere spanning 80° × 15° around the SGP, and the other in the northern Galactic hemisphere spanning 75° × 10° along the celestial equator; in addition, there are 99 fields spread over the southern Galactic cap. The survey covers 2000 deg 2 and has a median depth of z = 0.11. Adaptive tiling is used to give a highly uniform sampling rate of 93 per cent over the whole survey region. Redshifts are measured from spectra covering 3600-8000 A at a two-pixel resolution of 9.0 A and a median S/N of 13 pixel - 1 . All redshift identifications are visually checked and assigned a quality parameter Q in the range 1-5; Q ≥ 3 redshifts are 98.4 per cent reliable and have an rms uncertainty of 85 km s - 1 . The overall redshift completeness for Q ≥ 3 redshifts is 91.8 per cent, but this varies with magnitude from 99 per cent for the brightest galaxies to 90 per cent for objects at the survey limit. The 2dFGRS data base is available on the World Wide Web at http://www. mso.anu.edu.au/2dFGRS.

2,296 citations


Journal ArticleDOI
TL;DR: In this paper, a review of the physics and cosmology of the cosmological constant is presented, focusing on recent developments, and a pedagogical overview of cosmology in the presence of such a constant is given.
Abstract: This is a review of the physics and cosmology of the cosmological constant. Focusing on recent developments, I present a pedagogical overview of cosmology in the presence of a cosmological constant, observational constraints on its magnitude, and the physics of a small (and potentially nonzero) vacuum energy.

2,220 citations


Journal ArticleDOI
TL;DR: It is shown that a microfluidic device designed to produce reverse micelles can generate complex, ordered patterns as it is continuously operated far from thermodynamic equilibrium.
Abstract: Spatiotemporal pattern formation occurs in a variety of nonequilibrium physical and chemical systems. Here we show that a microfluidic device designed to produce reverse micelles can generate complex, ordered patterns as it is continuously operated far from thermodynamic equilibrium. Flow in a microfluidic system is usually simple—viscous effects dominate and the low Reynolds number leads to laminar flow. Self-assembly of the vesicles into patterns depends on channel geometry and relative fluid pressures, enabling the production of motifs ranging from monodisperse droplets to helices and ribbons.

2,061 citations


Journal ArticleDOI
TL;DR: This article found that the canonical model is not supported in any society studied, and that group-level differences in economic organization and the degree of market integration explain a substantial portion of the behavioral variation across societies.
Abstract: We can summarize our results as follows. First, the canonical model is not supported in any society studied. Second, there is considerably more behavioral variability across groups than had been found in previous cross-cultural research, and the canonical model fails in a wider variety of ways than in previous experiments. Third, group-level differences in economic organization and the degree of market integration explain a substantial portion of the behavioral variation across societies: the higher the degree of market integration and the higher the payoffs to cooperation, the greater the level of cooperation in experimental games. Fourth, individual-level economic and demographic variables do not explain behavior either within or across groups. Fifth, behavior in the experiments is generally consistent with economic patterns of everyday life in these societies.

2,019 citations


Journal ArticleDOI
TL;DR: In this article, a variety of composite quasar spectra using a homogeneous data set of over 2200 spectra from the Sloan Digital Sky Survey (SDSS) was created, and the median composite covers a restwavelength range from 800 to 8555 A and reaches a peak signal-to-noise ratio of over 300 per 1 A resolution element in the rest frame.
Abstract: We have created a variety of composite quasar spectra using a homogeneous data set of over 2200 spectra from the Sloan Digital Sky Survey (SDSS). The quasar sample spans a redshift range of 0.044 ≤ z ≤ 4.789 and an absolute r' magnitude range of -18.0 to -26.5. The input spectra cover an observed wavelength range of 3800–9200 A at a resolution of 1800. The median composite covers a rest-wavelength range from 800 to 8555 A and reaches a peak signal-to-noise ratio of over 300 per 1 A resolution element in the rest frame. We have identified over 80 emission-line features in the spectrum. Emission-line shifts relative to nominal laboratory wavelengths are seen for many of the ionic species. Peak shifts of the broad permitted and semiforbidden lines are strongly correlated with ionization energy, as previously suggested, but we find that the narrow forbidden lines are also shifted by amounts that are strongly correlated with ionization energy. The magnitude of the forbidden line shifts is 100 km s-1, compared with shifts of up to 550 km s-1 for some of the permitted and semiforbidden lines. At wavelengths longer than the Lyα emission, the continuum of the geometric mean composite is well fitted by two power laws, with a break at ≈5000 A. The frequency power-law index, αν, is -0.44 from ≈1300 to 5000 A and -2.45 redward of ≈5000 A. The abrupt change in slope can be accounted for partly by host-galaxy contamination at low redshift. Stellar absorption lines, including higher order Balmer lines, seen in the composites suggest that young or intermediate-age stars make a significant contribution to the light of the host galaxies. Most of the spectrum is populated by blended emission lines, especially in the range 1500–3500 A, which can make the estimation of quasar continua highly uncertain unless large ranges in wavelength are observed. An electronic table of the median quasar template is available.

Journal ArticleDOI
TL;DR: In this article, a set simulation approach is proposed to compute small failure probabilities encountered in reliability analysis of engineering systems, which can be expressed as a product of larger conditional failure probabilities by introducing intermediate failure events.

Journal ArticleDOI
TL;DR: In this paper, a review of integration algorithms for finite dimensional mechanical systems that are based on discrete variational principles is presented, including the Verlet, SHAKE, RATTLE, Newmark, and the symplectic partitioned Runge-Kutta schemes.
Abstract: This paper gives a review of integration algorithms for finite dimensional mechanical systems that are based on discrete variational principles. The variational technique gives a unified treatment of many symplectic schemes, including those of higher order, as well as a natural treatment of the discrete Noether theorem. The approach also allows us to include forces, dissipation and constraints in a natural way. Amongst the many specific schemes treated as examples, the Verlet, SHAKE, RATTLE, Newmark, and the symplectic partitioned Runge–Kutta schemes are presented.

Journal ArticleDOI
TL;DR: In this paper, a point dipole analysis predicts group velocities of energy transport that exceed 0.1c along straight arrays and shows that energy transmission and switching through chain networks such as corners and tee structures is possible at high efficiencies.
Abstract: The further integration of optical devices will require the fabrication of waveguides for electromagnetic energy below the diffraction limit of light. We investigate the possibility of using arrays of closely spaced metal nanoparticles for this purpose. Coupling between adjacent particles sets up coupled plasmon modes that give rise to coherent propagation of energy along the array. A point dipole analysis predicts group velocities of energy transport that exceed 0.1c along straight arrays and shows that energy transmission and switching through chain networks such as corners (see Figure) and tee structures is possible at high efficiencies. Radiation losses into the far field are expected to be negligible due to the near-field nature of the coupling, and resistive heating leads to transmission losses of about 6 dB/lm for gold and silver particles. We analyze macroscopic analogues operating in the microwave regime consisting of closely spaced metal rods by experiments and full field electrodynamic simulations. The guiding structures show a high confinement of the electromagnetic energy and allow for highly variable geometries and switching. Also, we have fabricated gold nanoparticle arrays using electron beam lithography and atomic force microscopy manipulation. These plasmon waveguides and switches could be the smallest devices with optical functionality.

Journal ArticleDOI
TL;DR: In this paper, a robust algorithm for cosmic-ray rejection, based on a variation of Laplacian edge detection, was proposed, which identifies cosmic rays of arbitrary shapes and sizes by the sharpness of their edges.
Abstract: Conventional algorithms for rejecting cosmic rays in single CCD exposures rely on the contrast between cosmic rays and their surroundings and may produce erroneous results if the point-spread function is smaller than the largest cosmic rays. This paper describes a robust algorithm for cosmic-ray rejection, based on a variation of Laplacian edge detection. The algorithm identifies cosmic rays of arbitrary shapes and sizes by the sharpness of their edges and reliably discriminates between poorly sampled point sources and cosmic rays. Examples of its performance are given for spectroscopic and imaging data, including Hubble Space Telescope Wide Field Planetary Camera 2 images.

Journal ArticleDOI
TL;DR: In this paper, the optical colors of 147,920 galaxies brighter than g* = 21, observed in five bands by the Sloan Digital Sky Survey (SDSS) over ~100 deg2 of high Galactic latitude sky along the celestial equator.
Abstract: We study the optical colors of 147,920 galaxies brighter than g* = 21, observed in five bands by the Sloan Digital Sky Survey (SDSS) over ~100 deg2 of high Galactic latitude sky along the celestial equator. The distribution of galaxies in the g*-r* versus u*-g* color-color diagram is strongly bimodal, with an optimal color separator of u*-r* = 2.22. We use visual morphology and spectral classification of subsamples of 287 and 500 galaxies, respectively, to show that the two peaks correspond roughly to early- (E, S0, and Sa) and late-type (Sb, Sc, and Irr) galaxies, as expected from their different stellar populations. We also find that the colors of galaxies are correlated with their radial profiles, as measured by the concentration index and by the likelihoods of exponential and de Vaucouleurs' profile fits. While it is well known that late-type galaxies are bluer than early-type galaxies, this is the first detection of a local minimum in their color distribution. In all SDSS bands, the counts versus apparent magnitude relations for the two color types are significantly different and demonstrate that the fraction of blue galaxies increases toward the faint end.

Journal ArticleDOI
08 Nov 2001-Nature
TL;DR: It is reported that the NSAIDs ibuprofen, indomethacin and sulindac sulphide preferentially decrease the highly amyloidogenic Aβ42 peptide (the 42-residue isoform of the amyloids-β peptide) produced from a variety of cultured cells by as much as 80%.
Abstract: Epidemiological studies have documented a reduced prevalence of Alzheimer's disease among users of nonsteroidal anti-inflammatory drugs (NSAIDs). It has been proposed that NSAIDs exert their beneficial effects in part by reducing neurotoxic inflammatory responses in the brain, although this mechanism has not been proved. Here we report that the NSAIDs ibuprofen, indomethacin and sulindac sulphide preferentially decrease the highly amyloidogenic Aβ42 peptide (the 42-residue isoform of the amyloid-β peptide) produced from a variety of cultured cells by as much as 80%. This effect was not seen in all NSAIDs and seems not to be mediated by inhibition of cyclooxygenase (COX) activity, the principal pharmacological target of NSAIDs. Furthermore, short-term administration of ibuprofen to mice that produce mutant β-amyloid precursor protein (APP) lowered their brain levels of Aβ42. In cultured cells, the decrease in Aβ42 secretion was accompanied by an increase in the Aβ(1–38) isoform, indicating that NSAIDs subtly alter γ-secretase activity without significantly perturbing other APP processing pathways or Notch cleavage. Our findings suggest that NSAIDs directly affect amyloid pathology in the brain by reducing Aβ42 peptide levels independently of COX activity and that this Aβ42-lowering activity could be optimized to selectively target the pathogenic Aβ42 species.

Journal ArticleDOI
TL;DR: In this article, the authors report data for I-band surface brightness fluctuation (SBF) magnitudes, (V-I) colors, and distance moduli for 300 galaxies.
Abstract: We report data for I-band surface brightness fluctuation (SBF) magnitudes, (V-I) colors, and distance moduli for 300 galaxies. The survey contains E, S0, and early-type spiral galaxies in the proportions of 49 : 42 : 9 and is essentially complete for E galaxies to Hubble velocities of 2000 km s-1, with a substantial sampling of E galaxies out to 4000 km s-1. The median error in distance modulus is 0.22 mag. We also present two new results from the survey. (1) We compare the mean peculiar flow velocity (bulk flow) implied by our distances with predictions of typical cold dark matter transfer functions as a function of scale, and we find very good agreement with cold, dark matter cosmologies if the transfer function scale parameter Γ and the power spectrum normalization σ8 are related by σ8Γ-0.5 ≈ 2 ± 0.5. Derived directly from velocities, this result is independent of the distribution of galaxies or models for biasing. This modest bulk flow contradicts reports of large-scale, large-amplitude flows in the ~200 Mpc diameter volume surrounding our survey volume. (2) We present a distance-independent measure of absolute galaxy luminosity, and show how it correlates with galaxy properties such as color and velocity dispersion, demonstrating its utility for measuring galaxy distances through large and unknown extinction.

Journal ArticleDOI
TL;DR: In this article, transformation equations are presented to convert colors and magnitudes measured in the AAO, ARNICA, CIT, DENIS, ESO, LCO (Persson standards), MSSSO, SAAO, and UKIRT photometric systems to the photometric system inherent in the 2MASS Second Incremental Data Release.
Abstract: Transformation equations are presented to convert colors and magnitudes measured in the AAO, ARNICA, CIT, DENIS, ESO, LCO (Persson standards), MSSSO, SAAO, and UKIRT photometric systems to the photometric system inherent in the 2MASS Second Incremental Data Release. The transformations have been derived by comparing 2MASS photometry with published magnitudes and colors for stars observed in these systems. Transformation equations have also been derived indirectly for the Bessell & Brett and Koornneef homogenized photometric systems.

Journal ArticleDOI
TL;DR: In this article, a comprehensive sample of all gamma-ray burst (GRB) afterglows with known distances is presented, and their conical opening angles are derived based on observed broadband breaks in their light curves.
Abstract: We present a comprehensive sample of all gamma-ray burst (GRB) afterglows with known distances, and we derive their conical opening angles based on observed broadband breaks in their light curves. Within the framework of this conical jet model, we correct for the geometry and we find that the gamma-ray energy release is narrowly clustered around 5 × 10^(50) ergs. We draw three conclusions. First, the central engines of GRBs release energies that are comparable to ordinary supernovae. Second, the broad distribution in fluence and luminosity for GRBs is largely the result of a wide variation of opening angles. Third, only a small fraction of GRBs are visible to a given observer, and the true GRB rate is several hundred times larger than the observed rate.

Journal ArticleDOI
TL;DR: The goal of the "Opportunities for Catalysis Research in Carbon Management" workshop was to review within the context of greenhouse gas/carbon issues the current state of knowledge, barriers to further scientific and technological progress, and basic scientific research needs in the areas of H2 generation and utilization.
Abstract: There is increased recognition by the world’s scientific, industrial, and political communities that the concentrations of greenhouse gases in the earth’s atmosphere, particularly CO_2, are increasing. For example, recent studies of Antarctic ice cores to depths of over 3600 m, spanning over 420 000 years, indicate an 80 ppm increase in atmospheric CO_2 in the past 200 years (with most of this increase occurring in the past 50 years) compared to the previous 80 ppm increase that required 10 000 years.2 The 160 nation Framework Convention for Climate Change (FCCC) in Kyoto focused world attention on possible links between CO2 and future climate change and active discussion of these issues continues.3 In the United States, the PCAST report4 “Federal Energy Research and Development for the Challenges of the Twenty First Century” focused attention on the growing worldwide demand for energy and the need to move away from current fossil fuel utilization. According to the U.S. DOE Energy Information Administration,5 carbon emission from the transportation (air, ground, sea), industrial (heavy manufacturing, agriculture, construction, mining, chemicals, petroleum), buildings (internal heating, cooling, lighting), and electrical (power generation) sectors of the World economy amounted to ca. 1823 million metric tons (MMT) in 1990, with an estimated increase to 2466 MMT in 2008-2012 (Table 1).

Journal ArticleDOI
TL;DR: The contribution of wood smoke to the ambient concentrations of benzene, ethene, and acetylene could lead to an overestimate of the contribution of motor vehicle tailpipe exhaust to atmospheric VOC concentrations.
Abstract: Organic compound emission rates for volatile organic compounds (VOC), gas-phase semivolatile organic compounds, and particle-phase organic compounds are measured from residential fireplace combustion of wood. Firewood from a conifer tree (pine) and from two deciduous trees (oak and eucalyptus) is burned to determine organic compound emissions profiles for each wood type including the distribution of the alkanes, alkenes, aromatics, polycyclic aromatic hydrocarbons (PAH), phenol and substituted phenols, guaiacol and substituted guaiacols, syringol and substituted syringols, carbonyls, alkanoic acids, resin acids, and levoglucosan. Levoglucosan is the major constituent in the fine particulate emissions from all three wood types, contributing 18−30% of the fine particulate organic compound emissions. Guaiacol (2-methoxyphenol), and guaiacols with additional substituents at position 4 on the molecule, and resin acids are emitted in significant quantities from pine wood combustion. Syringol (2,6-dimethoxyphenol) and syringols with additional substituents at position 4 on the molecule are emitted in large amounts from oak and eucalyptus firewood combustion, but these compounds are not detected in the emissions from pine wood combustion. Syringol and most of the substituted syringols are found to be semivolatile compounds that are present in both the gas and particle phases, but two substituted syringols that have not been previously quantified in wood smoke emissions, propionylsyringol and butyrylsyringol, are found exclusively in the particle phase and can be used to help trace hardwood smoke particles in the atmosphere. Benzene, ethene, and acetylene are often used as tracers for motor vehicle exhaust in the urban atmosphere. The contribution of wood smoke to the ambient concentrations of benzene, ethene, and acetylene could lead to an overestimate of the contribution of motor vehicle tailpipe exhaust to atmospheric VOC concentrations.

Journal ArticleDOI
TL;DR: In this paper, error-correcting codes are constructed that embed a finite-dimensional code space in the infinite-dimensional Hilbert space of a system described by continuous quantum variables to protect encoded quantum information against shifts in the amplitude or phase of a d-state system.
Abstract: Quantum error-correcting codes are constructed that embed a finite-dimensional code space in the infinite-dimensional Hilbert space of a system described by continuous quantum variables. These codes exploit the noncommutative geometry of phase space to protect against errors that shift the values of the canonical variables q and p. In the setting of quantum optics, fault-tolerant universal quantum computation can be executed on the protected code subspace using linear optical operations, squeezing, homodyne detection, and photon counting; however, nonlinear mode coupling is required for the preparation of the encoded states. Finite-dimensional versions of these codes can be constructed that protect encoded quantum information against shifts in the amplitude or phase of a d-state system. Continuous-variable codes can be invoked to establish lower bounds on the quantum capacity of Gaussian quantum channels.

Journal ArticleDOI
TL;DR: In this paper, the authors describe the target selection and resulting properties of a spectroscopic sample of luminous red galaxies (LRGs) from the imaging data of the Sloan Digital Sky Survey (SDSS).
Abstract: We describe the target selection and resulting properties of a spectroscopic sample of luminous red galaxies (LRGs) from the imaging data of the Sloan Digital Sky Survey (SDSS). These galaxies are selected on the basis of color and magnitude to yield a sample of luminous intrinsically red galaxies that extends fainter and farther than the main flux-limited portion of the SDSS galaxy spectroscopic sample. The sample is designed to impose a passively evolving luminosity and rest-frame color cut to a redshift of 0.38. Additional, yet more luminous red galaxies are included to a redshift of ~0.5. Approximately 12 of these galaxies per square degree are targeted for spectroscopy, so the sample will number over 100,000 with the full survey. SDSS commissioning data indicate that the algorithm efficiently selects luminous (M^+_g ≈ -21.4) red galaxies, that the spectroscopic success rate is very high, and that the resulting set of galaxies is approximately volume limited out to z = 0.38. When the SDSS is complete, the LRG spectroscopic sample will fill over 1 h^(-3) Gpc^3 with an approximately homogeneous population of galaxies and will therefore be well suited to studies of large-scale structure and clusters out to z = 0.5.

Journal ArticleDOI
TL;DR: A coordination architecture that subsumes leader-following, behavioral, and virtual-structure approaches to the multiagent coordination problem is introduced and illustrated through a detailed application of the ideas to the problem of synthesizing a multiple spacecraft interferometer in deep space.
Abstract: This paper addresses the problem of coordinating multiple spacecraft to fly in tightly controlled formations. The main contribution of the paper is to introduce a coordination architecture that subsumes leader-following, behavioral, and virtual-structure approaches to the multiagent coordination problem. The architecture is illustrated through a detailed application of the ideas to the problem of synthesizing a multiple spacecraft interferometer in deep space.

Journal ArticleDOI
TL;DR: A new active queue management scheme, random exponential marking (REM), is described that aims to achieve both high utilization and negligible loss and delay in a simple and scalable manner and presents simulation results of its performance in wireline and wireless networks.
Abstract: We describe a new active queue management scheme, random exponential marking (REM), that aims to achieve both high utilization and negligible loss and delay in a simple and scalable manner. The key idea is to decouple the congestion measure from the performance measure such as loss, queue length, or delay. While the congestion measure indicates excess demand for bandwidth and must track the number of users, the performance measure should be stabilized around their targets independent of the number of users. We explain the design rationale behind REM and present simulation results of its performance in wireline and wireless networks.

Journal ArticleDOI
TL;DR: In this article, the authors combine the Two Micron All Sky Survey (2MASS) Extended Source Catalogue and the 2dF Galaxy Redshift Survey to produce an infrared selected galaxy catalogue with 17 173 measured redshifts.
Abstract: We combine the Two Micron All Sky Survey (2MASS) Extended Source Catalogue and the 2dF Galaxy Redshift Survey to produce an infrared selected galaxy catalogue with 17 173 measured redshifts. We use this extensive data set to estimate the galaxy luminosity functions in the J- and KS-bands. The luminosity functions are fairly well fitted by Schechter functions with parameters MJ*−5 log h=−22.36±0.02, αJ=−0.93±0.04, ΦJ*=0.0104±0.0016 h3 Mpc3 in the J-band and MKS*−5 log h=−23.44±0.03, αKS=−0.96±0.05, ΦKS*=0.0108±0.0016 h3 Mpc3 in the KS-band (2MASS Kron magnitudes). These parameters are derived assuming a cosmological model with Ω0=0.3 and Λ0=0.7. With data sets of this size, systematic rather than random errors are the dominant source of uncertainty in the determination of the luminosity function. We carry out a careful investigation of possible systematic effects in our data. The surface brightness distribution of the sample shows no evidence that significant numbers of low surface brightness or compact galaxies are missed by the survey. We estimate the present-day distributions of bJ−KS and J−KS colours as a function of the absolute magnitude and use models of the galaxy stellar populations, constrained by the observed optical and infrared colours, to infer the galaxy stellar mass function. Integrated over all galaxy masses, this yields a total mass fraction in stars (in units of the critical mass density) of Ωstarsh =(1.6±0.24)×103 for a Kennicutt initial mass function (IMF) and Ωstarsh =(2.9±0.43)×103 for a Salpeter IMF. These values are consistent with those inferred from observational estimates of the total star formation history of the Universe provided that dust extinction corrections are modest.

Journal ArticleDOI
TL;DR: The origins of the observed substituent effects as well as the implications of these studies for the design and implementation of new olefin metathesis catalysts and substrates are discussed in detail.
Abstract: This report details the effects of ligand variation on the mechanism and activity of ruthenium-based olefin metathesis catalysts. A series of ruthenium complexes of the general formula L(PR3)(X)2RuCHR1 have been prepared, and the influence of the substituents L, X, R, and R1 on the rates of phosphine dissociation and initiation as well as overall activity for olefin metathesis reactions was examined. In all cases, initiation proceeds by dissociative substitution of a phosphine ligand (PR3) with an olefinic substrate. All of the ligands L, X, R, and R1 have a significant impact on initiation rates and on catalyst activity. The origins of the observed substituent effects as well as the implications of these studies for the design and implementation of new olefin metathesis catalysts and substrates are discussed in detail.

Journal ArticleDOI
TL;DR: This paper provides an overview of the synthetic techniques used to prepare colloidal nanocrystals of controlled composition, size, shape, and internal structure and the methods for manipulating these Ns.
Abstract: This paper provides an overview of the synthetic techniques used to prepare colloidal nanocrystals (NCs) of controlled composition, size, shape, and internal structure and the methods for manipulat...

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TL;DR: In this article, the radio counterparts to the IRAS Redshift Survey galaxies are identified in the NRAO VLA Sky Survey (NVSS) catalog, and their radio and far-IR properties of galaxies in the local volume are used directly to infer the extinction-free star formation rate.
Abstract: The radio counterparts to the IRAS Redshift Survey galaxies are identified in the NRAO VLA Sky Survey (NVSS) catalog. Our new catalog of the IR flux-limited (S60 μm ≥ 2 Jy) complete sample of 1809 galaxies lists accurate radio positions, redshifts, and 1.4 GHz radio and IRAS fluxes. This sample is 6 times larger in size and 5 times deeper in redshift coverage (to z ≈ 0.15) than those used in earlier studies of the radio and far-IR (FIR) properties of galaxies in the local volume. The well-known radio-FIR correlation is obeyed by the overwhelming majority (≥98%) of the IR-selected galaxies, and the radio AGNs identified by their excess radio emission constitute only about 1% of the sample, independent of the IR luminosity. These FIR-selected galaxies can account for the entire population of late-type field galaxies in the local volume, and their radio continuum may be used directly to infer the extinction-free star formation rate in most cases. Both the 1.4 GHz radio and 60 μm IR luminosity functions are reasonably well described by linear sums of two Schechter functions, one representing normal, late-type field galaxies and the other representing starbursts and other luminous IR galaxies. The integrated FIR luminosity density for the local volume is (4.8 ± 0.5) × 107 L☉ Mpc-3, less than 10% of which is contributed by the luminous IR galaxies with LFIR ≥ 1011 L☉. The inferred extinction-free star formation density for the local volume is 0.015 ± 0.005 M☉ yr-1 Mpc-3.