Showing papers by "Louisiana State University published in 2005"
TL;DR: This paper surveys and summarizes previous works that investigated the clustering of time series data in various application domains, including general-purpose clustering algorithms commonly used in time series clustering studies.
2,336 citations
TL;DR: Cancer death rates for all cancer sites combined and for many common cancers have declined at the same time as the dissemination of guideline-based treatment into the community has increased, although this progress is not shared equally across all racial and ethnic populations.
Abstract: Background: The American Cancer Society (ACS), the Centers for Disease Control and Prevention (CDC), the National Cancer Institute (NCI), and the North American Association of Central Cancer Registries (NAACCR) collaborate annually to provide information on cancer rates and trends in the United States. This year’s report updates statistics on the 15 most common cancers in the fi ve major racial/ethnic populations in the United States for 1992 – 2002 and features populationbased trends in cancer treatment. Methods: The NCI, the CDC, and the NAACCR provided information on cancer cases, and the CDC provided information on cancer deaths. Reported incidence and death rates were age-adjusted to the 2000 U.S. standard population, annual percent change in rates for fi xed intervals was estimated by linear regression, and annual percent change in trends was estimated with joinpoint regression analysis. Population-based treatment data were derived from the Surveillance, Epidemiology, and End Results (SEER) Program registries, SEER-Medicare linked databases, and NCI Patterns of Care/Quality of Care studies. Results: Among men, the incidence rates for all cancer sites combined were stable from 1995 through 2002. Among women, the incidence rates increased by 0.3% annually from 1987 through 2002. Death rates in men and women combined decreased by 1.1% annually from 1993 through 2002 for all cancer sites combined and also for many of the 15 most common cancers. Among women, lung cancer death rates increased from 1995 through 2002, but lung cancer incidence rates stabilized from 1998 through 2002. Although results of cancer treatment studies suggest that much of contemporary cancer treatment for selected cancers is consistent with evidencebased guidelines, they also point to geographic, racial, economic, and age-related disparities in cancer treatment. Conclusions: Cancer death rates for all cancer sites combined and for many common cancers have declined at the same time as the dissemination of guideline-based treatment into the community has increased, although this progress is not shared equally across all racial and ethnic populations. Data from population-based cancer registries, supplemented by linkage with administrative databases, are an important resource for monitoring the quality of cancer treatment. Use of this cancer surveillance system, along with new developments in medical informatics and electronic medical records, may facilitate monitoring of the translation of basic science and clinical advances to cancer prevention, detection, and uniformly high quality of care in all areas and populations of the United States. [J Natl Cancer Inst 2005;97:1407 – 27]
1,087 citations
TL;DR: It is argued that the critical aspect of successful WM measures is that rehearsal and grouping processes are prevented, allowing a clearer estimate of how many separate chunks of information the focus of attention circumscribes at once.
1,051 citations
Tohoku University1, University of Tokyo2, University of Alabama3, Los Alamos National Laboratory4, Lawrence Berkeley National Laboratory5, University of California, Berkeley6, Kansas State University7, California Institute of Technology8, Drexel University9, Louisiana State University10, University of New Mexico11, Stanford University12, Imperial College London13, University of Tennessee14, University of North Carolina at Chapel Hill15, Duke University16, University of Bordeaux17
TL;DR: In this article, a study of neutrino oscillation based on a 766 ton/year exposure of KamLAND to reactor antineutrinos is presented, where the observed energy spectrum disagrees with the expected spectral shape.
Abstract: We present results of a study of neutrino oscillation based on a 766 ton/year exposure of KamLAND to reactor antineutrinos. We observe 258 [overline nu ]e candidate events with energies above 3.4 MeV compared to 365.2±23.7 events expected in the absence of neutrino oscillation. Accounting for 17.8±7.3 expected background events, the statistical significance for reactor [overline nu ]e disappearance is 99.998%. The observed energy spectrum disagrees with the expected spectral shape in the absence of neutrino oscillation at 99.6% significance and prefers the distortion expected from [overline nu ]e oscillation effects. A two-neutrino oscillation analysis of the KamLAND data gives Deltam2=7.9 -0.5 +0.6 ×10-5 eV2. A global analysis of data from KamLAND and solar-neutrino experiments yields Deltam2=7.9 -0.5 +0.6 ×10-5 eV2 and tan2theta=0.40 -0.07 +0.10 , the most precise determination to date.
992 citations
TL;DR: Modeling the ONH as a biomechanical structure generates a group of testable hypotheses regarding the central mechanisms of glaucomatous damage and provides a logic for classifying the principal components of the susceptibility of an individual ONH to a given level of IOP.
976 citations
TL;DR: In this article, the authors investigated whether the display of naturally felt emotions is distinct from surface acting and deep acting as a method of displaying organizationally desired emotions and examined dispositional and situational antecedents of surface acting, deep acting, and the expression of natural felt emotions.
940 citations
TL;DR: In a mouse model of intestinal manipulation, stimulation of the vagus nerve ameliorated surgery-induced inflammation and postoperative ileus by activating STAT3 in intestinal macrophages and it is concluded that the vagal anti-inflammatory pathway acts by α7 subunit–mediated Jak2-STAT3 activation.
Abstract: Acetylcholine released by efferent vagus nerves inhibits macrophage activation. Here we show that the anti-inflammatory action of nicotinic receptor activation in peritoneal macrophages was associated with activation of the transcription factor STAT3. STAT3 was phosphorylated by the tyrosine kinase Jak2 that was recruited to the alpha7 subunit of the nicotinic acetylcholine receptor. The anti-inflammatory effect of nicotine required the ability of phosphorylated STAT3 to bind and transactivate its DNA response elements. In a mouse model of intestinal manipulation, stimulation of the vagus nerve ameliorated surgery-induced inflammation and postoperative ileus by activating STAT3 in intestinal macrophages. We conclude that the vagal anti-inflammatory pathway acts by alpha7 subunit-mediated Jak2-STAT3 activation.
918 citations
TL;DR: Interestingly, SEM, TEM, and HRTEM revealed a variety of structures ranging from nanostructured surface with a distinct platelike morphology to nanorod depending upon the hydrothermal reaction time employed during the preparation of the manganese oxide: increasing the amount of individual nanorods in the materials prepared with longer hydrother mal reaction time.
Abstract: The effect of varying the hydrothermal time to synthesize manganese oxide (MnO(2)) nanostructures was investigated along with their influence on structural, morphological, compositional, and electrochemical properties in supercapacitor electrode materials. XRD and TEM studies showed that the MnO(2) prepared in shorter hydrothermal dwell time was a mixture of amorphous and nanocrystalline particles, and there was an evolution of crystallinity of the nanostructures as the dwell time increased from 1 to 18 h. Interestingly, SEM, TEM, and HRTEM revealed a variety of structures ranging from nanostructured surface with a distinct platelike morphology to nanorods depending upon the hydrothermal reaction time employed during the preparation of the manganese oxide: increasing the amount of individual nanorods in the materials prepared with longer hydrothermal reaction time. The surface area of the synthesized nanomaterials varied from 100 to 150 m(2)/g. Electrochemical properties were evaluated using cyclic voltammetry (CV) and galvanostatic charge-discharge studies, and the capacitance values were in the range 72-168 F/g depending upon synthesis conditions. The formation mechanism of the nanorods and their impact on the specific capacitance were discussed in detail.
871 citations
TL;DR: Results indicate that NPD1 promotes brain cell survival via the induction of antiapoptotic and neuroprotective gene-expression programs that suppress Abeta42-induced neurotoxicity.
Abstract: Deficiency in docosahexaenoic acid (DHA), a brain-essential omega-3 fatty acid, is associated with cognitive decline. Here we report that, in cytokine-stressed human neural cells, DHA attenuates amyloid-β (Aβ) secretion, an effect accompanied by the formation of NPD1, a novel, DHA-derived 10,17S-docosatriene. DHA and NPD1 were reduced in Alzheimer disease (AD) hippocampal cornu ammonis region 1, but not in the thalamus or occipital lobes from the same brains. The expression of key enzymes in NPD1 biosynthesis, cytosolic phospholipase A2 and 15-lipoxygenase, was altered in AD hippocampus. NPD1 repressed Aβ42-triggered activation of proinflammatory genes while upregulating the antiapoptotic genes encoding Bcl-2, Bcl-xl, and Bfl-1(A1). Soluble amyloid precursor protein-α stimulated NPD1 biosynthesis from DHA. These results indicate that NPD1 promotes brain cell survival via the induction of antiapoptotic and neuroprotective gene-expression programs that suppress Aβ42-induced neurotoxicity.
808 citations
TL;DR: The relationship between Ti-content, temperature, and Mg/(Mg + Fe) value was calibrated empirically using an extensive natural biotite data set (529 samples) from western Maine and south-central Massachusetts in combination with the petrogenetic grid of Spear et al..
Abstract: The Ti content of biotite can serve as a geothermometer for graphitic, peraluminous metapelites that contain ilmenite or rutile and have equilibrated at roughly 4–6 kbar. The relationship between Ti-content, temperature, and Mg/(Mg + Fe) value was calibrated empirically using an extensive natural biotite data set (529 samples) from western Maine and south-central Massachusetts in combination with the petrogenetic grid of Spear et al. (1999). The calculated Ti-saturation surface is curved such that for a given Mg/(Mg + Fe) value, Ti concentration increases as a function of temperature in a nonlinear fashion, and for a given temperature Ti concentrations decrease with an increase in Mg/(Mg + Fe). The fit to the Ti-saturation surface can be reformulated as the geothermometric expression: T = {[ln(Ti) − a − c ( X Mg)3]/ b }0.333, in which T is temperature in degrees Celsius, Ti is the number of atoms per formula unit (apfu) normalized on the basis of 22 O atoms, X Mg is Mg/(Mg + Fe), a = −2.3594, b = 4.6482 × 10−9 and c = −1.7283. The calibration range for this expression is X Mg = 0.275–1.000, Ti = 0.04–0.60 apfu, and T = 480–800 °C. Precision of the Ti-in-biotite geothermometer is estimated to be ±24 °C at the lower temperature range and improves to ±12 °C at higher temperatures. Application of the Ti-in-biotite geothermometer to ilmenite- or rutile-bearing, graphitic, peraluminous metapelites equilibrated at 3–6 kbar is generally consistent with independent temperature determinations, but with some deviations that represent local reequilibration. Consequently, the Ti systematics in biotite can also serve as the basis of a very sensitive indicator of chemical equilibrium, or lack thereof. Application of the geothermometer to metapelites not containing the requisite mineral assemblages can lead to minor-to-significant errors in estimated temperatures.
Biotite Ti-substitution mechanisms are controlled by several factors. Based on the biotite calibration data set, magnesian biotites ( X Mg > 0.65) incorporate Ti in accordance with the exchange vector TiAl2R−1Si−2, where R is the sum of the divalent cations Mg + Fe + Mn. This substitution mechanism is primarily a response to misfit of the octahedral and tetrahedral layers in magnesian biotites. Intermediate biotites ( X Mg <0.65), particularly at higher temperatures, exhibit enhanced Ti concentrations, most consistent with the Ti-deprotonation TiO2R−1(OH) −2 exchange vector. Dominance of Ti-deprotonation substitution is largely a function of reduction of H2O activity at higher metamorphic grades. Supplementary biotite data from metaluminous amphibolites and mafic granulites, metamorphosed isothermally with variable H2O activities, reveal that low-Al biotite incorporates significantly higher concentrations of Ti relative to peraluminous biotite as a result of a combination of the exchange vectors TiO2R−1(OH) −2 and RSiAl−2 substituting in roughly an 8:1 ratio.
711 citations
University of Tokyo1, Boston University2, Brookhaven National Laboratory3, University of California, Irvine4, California State University, Dominguez Hills5, Chonnam National University6, Duke University7, George Mason University8, Gifu University9, Indiana University10, University of Tsukuba11, Okayama University12, Kobe University13, Kyoto University14, Los Alamos National Laboratory15, Louisiana State University16, University of Maryland, College Park17, University of Minnesota18, Miyagi University of Education19, Stony Brook University20, Nagoya University21, Niigata University22, Osaka University23, Seoul National University24, Shizuoka University25, Sungkyunkwan University26, Tohoku University27, Tokai University28, Tokyo Institute of Technology29, University of Warsaw30, University of Washington31
TL;DR: In this article, a combined analysis of fully-contained, partially-contained and upward-going muon atmospheric neutrino data from a 1489 d exposure of the Super-Kamiokande detector is presented.
Abstract: We present a combined analysis of fully-contained, partially-contained and upward-going muon atmospheric neutrino data from a 1489 d exposure of the Super-Kamiokande detector. The data samples span roughly five decades in neutrino energy, from 100 MeV to 10 TeV. A detailed Monte Carlo comparison is described and presented. The data is fit to the Monte Carlo expectation, and is found to be consistent with neutrino oscillations of {nu}{sub {mu}}{r_reversible}{nu}{sub {tau}} with sin{sup 2}2{theta}>0.92 and 1.5x10{sup -3}<{delta}m{sup 2}<3.4x10{sup -3} eV{sup 2} at 90% confidence level.
TL;DR: It seems that D. radiodurans uses mechanisms that limit DNA degradation and that restrict the diffusion of DNA fragments that are produced following irradiation, to preserve genetic integrity.
Abstract: Relatively little is known about the biochemical basis of the capacity of Deinococcus radiodurans to endure the genetic insult that results from exposure to ionizing radiation and can include hundreds of DNA double-strand breaks. However, recent reports indicate that this species compensates for extensive DNA damage through adaptations that allow cells to avoid the potentially detrimental effects of DNA strand breaks. It seems that D. radiodurans uses mechanisms that limit DNA degradation and that restrict the diffusion of DNA fragments that are produced following irradiation, to preserve genetic integrity. These mechanisms also increase the efficiency of the DNA-repair proteins.
TL;DR: The author begins by discussing the image formation process and examines the demosaicking methods in three groups: the first group consists of heuristic approaches, the second group formulates demosaicked as a restoration problem, and the third group is a generalization that uses the spectral filtering model given in Wandell.
Abstract: The author begins by discussing the image formation process. The demosaicking methods are examined in three groups: the first group consists of heuristic approaches. The second group formulates demosaicking as a restoration problem. The third group is a generalization that uses the spectral filtering model given in Wandell.
TL;DR: The nature of the phosphatases that mediate the hydrolysis of phosphotyrosine 138 and 213, and phosphoserine and phosphothreonine residues has not been determined and only phosphorylation by CDK1/cdc2 has been demonstrated to increase Src kinase activity.
TL;DR: Simple methods for detecting either Hcy or Cys in the visible spectral region with the highest selectivity reported to date without using biochemical techniques or preparative separations are described.
Abstract: At elevated levels, homocysteine (Hcy, 1) is a risk factor for cardiovascular diseases, Alzheimer's disease, neural tube defects, and osteoporosis. Both 1 and cysteine (Cys, 3) are linked to neurotoxicity. The biochemical mechanisms by which 1 and 3 are involved in disease states are relatively unclear. Herein, we describe simple methods for detecting either Hcy or Cys in the visible spectral region with the highest selectivity reported to date without using biochemical techniques or preparative separations. Simple methods and readily available reagents allow for the detection of Cys and Hcy in the range of their physiologically relevant levels. New HPLC postcolumn detection methods for biological thiols are reported. The potential biomedical relevance of the chemical mechanisms involved in the detection of 1 is described.
TL;DR: A pattern of repeat-mediated chromosomal rearrangement, and high coadaptation of both male genes and cis-regulatory sequences emerges as important themes of genome divergence between these species of Drosophila.
Abstract: We have sequenced the genome of a second Drosophila species, Drosophila pseudoobscura, and compared this to the genome sequence of Drosophila melanogaster, a primary model organism. Throughout evolution the vast majority of Drosophila genes have remained on the same chromosome arm, but within each arm gene order has been extensively reshuffled, leading to a minimum of 921 syntenic blocks shared between the species. A repetitive sequence is found in the A pseudoobscura genome at many junctions between adjacent syntenic blocks. Analysis of this novel repetitive element family suggests that recombination between offset elements may have given rise to many paracentric inversions, thereby contributing to the shuffling of gene order in the D. pseudoobscura lineage. Based on sequence similarity and synteny, 10,516 putative orthologs have been identified as a core gene set conserved over 25-55 million years (Myr) since the pseudoobscura/melanogaster divergence. Genes expressed in the testes had higher amino acid sequence divergence than the genome-wide average, consistent with the rapid evolution of sex-specific proteins. Cis-regulatory sequences are more conserved than random and nearby sequences between the species-but the difference is slight, suggesting that the evolution of cis-regulatory elements is flexible. Overall, a pattern of repeat-mediated chromosomal rearrangement, and high coadaptation of both male genes and cis-regulatory sequences emerges as important themes of genome divergence between these species of Drosophila.
Harvard University1, University of Cincinnati2, University of Texas Southwestern Medical Center3, University of Iowa4, National Institutes of Health5, Duke University6, Emory University7, University of Pennsylvania8, McGill University9, University of Colorado Denver10, Baylor College of Medicine11, Boston Children's Hospital12, Louisiana State University13
TL;DR: The present work presents a meta-analysis of the immune checkpoints in the immune system that highlights the importance of knowing these checkpoints before and during the course of treatment with chemotherapy.
Abstract: TABLE OF CONTENTS I. Preface S1 II. Executive Summary S2 III. Algorithms S7 IV. Summary Statements S14 V. General Considerations S20 VI. Humoral Immunodeficiencies S24 VII. Cellular Immunodeficiencies S30 VIII. Combined Immunodeficiencies S33 IX. Phagocytic Cell Disorders S40 X. Complement Deficiencies S43 XI. Acknowledgments S45 XII. References S45 XIII. Appendix S61
TL;DR: This paper examined teachers' implementation of treatment plans following consultation Interventions were implemented for 45 elementary school students referred for consultation and intervention and intervention was implemented for each of the 45 children referred for intervention.
Abstract: This study examined teachers' implementation of treatment plans following consultation Interventions were implemented for 45 elementary school students referred for consultation and intervention d
TL;DR: This paper examined whether structural, attitudinal, and behavioral variables of a relational nature were predictive of employee turnover in a sample of 176 health care employees and found that behavioral variables were correlated with employee turnover.
Abstract: This study examined whether structural, attitudinal, and behavioral variables of a relational nature were predictive of employee turnover. Participants were a sample of 176 health care employees fr...
TL;DR: The value of sickness behavior as an animal model of major depressive disorder is limited, so that care should be taken in extrapolating results from the model to the human disorder, but it is concluded that immune activation and cytokines may be involved in depressive symptoms in some patients.
Tohoku University1, University of Alabama2, University of California, Berkeley3, California Institute of Technology4, Drexel University5, University of Hawaii at Manoa6, Kansas State University7, Louisiana State University8, University of New Mexico9, Stanford University10, University of Tennessee11, North Carolina State University12, Duke University13, University of North Carolina at Chapel Hill14, Centre national de la recherche scientifique15
TL;DR: Although the present data have limited statistical power, they nevertheless provide by direct means an upper limit for the radiogenic power of U and Th in the Earth, a quantity that is currently poorly constrained.
Abstract: The detection of electron antineutrinos produced by natural radioactivity in the Earth could yield important geophysical information. The Kamioka liquid scintillator antineutrino detector (KamLAND) has the sensitivity to detect electron antineutrinos produced by the decay of ^(238)U and ^(232)Th within the Earth. Earth composition models suggest that the radiogenic power from these isotope decays is 16 TW, approximately half of the total measured heat dissipation rate from the Earth. Here we present results from a search for geoneutrinos with KamLAND. Assuming a Th/U mass concentration ratio of 3.9, the 90 per cent confidence interval for the total number of geoneutrinos detected is 4.5 to 54.2. This result is consistent with the central value of 19 predicted by geophysical models. Although our present data have limited statistical power, they nevertheless provide by direct means an upper limit (60 TW) for the radiogenic power of U and Th in the Earth, a quantity that is currently poorly constrained.
TL;DR: The energy-dependent disappearance of nu(mu), which the authors presume have oscillated to nu(tau), is observed in the KEK to Kamioka (K2K) long-baseline neutrino oscillation experiment.
Abstract: We present results for nu(mu) oscillation in the KEK to Kamioka (K2K) long-baseline neutrino oscillation experiment. K2K uses an accelerator-produced nu(mu) beam with a mean energy of 1.3 GeV directed at the Super-Kamiokande detector. We observed the energy-dependent disappearance of nu(mu), which we presume have oscillated to nu(tau). The probability that we would observe these results if there is no neutrino oscillation is 0.0050% (4.0 sigma).
TL;DR: The first section of this article discusses enantioselective optimization of polymerization, the second section will review methods employed for evaluation of MIPs and the last section will cover materials science methods used to characterize the physical properties of M IP materials.
TL;DR: In this article, the relationship between house prices and environmental disamenities using spatial statistics is investigated, and it is shown that nearby point-source pollutants depress house price and that environmental quality and school quality are substitutes for house price.
TL;DR: The generation, compression, and delivery on target of ultrashort extreme-ultraviolet light pulses using external amplitude and phase control is reported, demonstrating a practical method for synthesizing and controlling attosecond waveforms.
Abstract: We report the generation, compression, and delivery on target of ultrashort extreme-ultraviolet light pulses using external amplitude and phase control. Broadband harmonic radiation is first generated by focusing an infrared laser with a carefully chosen intensity into a gas cell containing argon atoms. The emitted light then goes through a hard aperture and a thin aluminum filter that selects a 30-eV bandwidth around a 30-eV photon energy and synchronizes all of the components, thereby enabling the formation of a train of almost Fourier-transform-limited single-cycle 170 attosecond pulses. Our experiment demonstrates a practical method for synthesizing and controlling attosecond waveforms.
TL;DR: The recovery of large numbers of extremely ionizing-radiation-resistant bacteria from an arid soil and not from a nonarid soil provides further ecological support for the hypothesis that the ionizing -radiation resistance phenotype is a consequence of the evolution of other DNA repair systems that protect cells against commonly encountered environmental stressors, such as desiccation.
Abstract: The ionizing-radiation-resistant fractions of two soil bacterial communities were investigated by exposing an arid soil from the Sonoran Desert and a nonarid soil from a Louisiana forest to various doses of ionizing radiation using a (60)Co source. The numbers of surviving bacteria decreased as the dose of gamma radiation to which the soils were exposed increased. Bacterial isolates surviving doses of 30 kGy were recovered from the Sonoran Desert soil, while no isolates were recovered from the nonarid forest soil after exposure to doses greater than 13 kGy. The phylogenetic diversities of the surviving culturable bacteria were compared for the two soils using 16S rRNA gene sequence analysis. In addition to a bacterial population that was more resistant to higher doses of ionizing radiation, the diversity of the isolates was greater in the arid soil. The taxonomic diversity of the isolates recovered was found to decrease as the level of ionizing-radiation exposure increased. Bacterial isolates of the genera Deinococcus, Geodermatophilus, and Hymenobacter were still recovered from the arid soil after exposure to doses of 17 to 30 kGy. The recovery of large numbers of extremely ionizing-radiation-resistant bacteria from an arid soil and not from a nonarid soil provides further ecological support for the hypothesis that the ionizing-radiation resistance phenotype is a consequence of the evolution of other DNA repair systems that protect cells against commonly encountered environmental stressors, such as desiccation. The diverse group of bacterial strains isolated from the arid soil sample included 60 Deinococcus strains, the characterization of which revealed nine novel species of this genus.
TL;DR: A model that can identify patients undergoing cardiac surgery who are at high risk for major infection is identified and validated, and these high-risk patients may be targeted for perioperative intervention strategies to reduce rates of major infection.
Abstract: Background— Major infections are infrequent but important complications of cardiac surgery. Predicting their occurrence is essential for future prevention. The objective of the current investigatio...
TL;DR: In this paper, the authors show that the sum of the estimated autoregressive parameters of the conditional variance converges to one for all common estimators of the GARCH model.
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TL;DR: In this article, the authors examined the relationship between organizational learning culture, learning transfer climate, and organizational innovation, and found that organizational learning cultures predicted learning climate and both these factors accounted for significant variance in organizational innovation.
Abstract: This paper examines the relationship between organizational learning culture, learning transfer climate, and organizational innovation. The objective was to test the ability of learning organization culture to account for variance in learning transfer climate and subsequent organizational innovation, and to examine the role of learning transfer climate as a mediator between learning organization culture and innovation. Results showed that organizational learning culture predicted learning transfer climate, and both these factors accounted for significant variance in organizational innovation.
TL;DR: In this paper, a semi-empirical model was used to develop the hadronic portion of air showers in a manner analogous to the well-known Heitler splitting approximation of electromagnetic cascades.