T
Thomas McColgan
Researcher at Humboldt University of Berlin
Publications - 13
Citations - 283
Thomas McColgan is an academic researcher from Humboldt University of Berlin. The author has contributed to research in topics: Interaural time difference & Extracellular field potential. The author has an hindex of 7, co-authored 13 publications receiving 228 citations. Previous affiliations of Thomas McColgan include RWTH Aachen University.
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Journal ArticleDOI
Community-based benchmarking improves spike rate inference from two-photon calcium imaging data.
Philipp Berens,Jeremy Freeman,Thomas Deneux,Nikolay Chenkov,Thomas McColgan,Artur Speiser,Jakob H. Macke,Jakob H. Macke,Srinivas C. Turaga,Patrick J. Mineault,Peter Rupprecht,Stephan Gerhard,Rainer W. Friedrich,Johannes Friedrich,Liam Paninski,Marius Pachitariu,Marius Pachitariu,Kenneth D. Harris,Ben Bolte,Timothy A. Machado,Dario L. Ringach,Jasmine T. Stone,Jasmine T. Stone,Luke Edward Rogerson,Nicolas J. Sofroniew,Jacob Reimer,Emmanouil Froudarakis,Thomas Euler,Miroslav Roman-Roson,Miroslav Roman-Roson,Lucas Theis,Andreas S. Tolias,Andreas S. Tolias,Matthias Bethge +33 more
TL;DR: The results of the spikefinder challenge, launched to catalyze the development of new spike rate inference algorithms through crowd-sourcing, are reported, and the top-performing algorithms are based on a wide range of principles, yet provide highly correlated estimates of the neural activity.
Journal ArticleDOI
26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3
Adam J. H. Newton,Adam J. H. Newton,Alexandra H. Seidenstein,Robert A. McDougal,Alberto Pérez-Cervera,Gemma Huguet,Tere M-Seara,Caroline Haimerl,Caroline Haimerl,David Angulo-Garcia,Alessandro Torcini,Alessandro Torcini,Rosa Cossart,Arnaud Malvache,Kaoutar Skiker,Mounir Maouene,Gianmarco Ragognetti,Letizia Lorusso,Andrea Viggiano,Angelo Marcelli,Rosa Senatore,Antonio Parziale,S. Stramaglia,M. Pellicoro,Leonardo Angelini,Enrico Amico,Enrico Amico,H. Aerts,Jesus M. Cortes,Steven Laureys,D. Marinazzo,I. Bassez,L. Faes,Hannes Almgren,Adeel Razi,Adeel Razi,Frederik Van de Steen,Ruth M. Krebs,Hannelore Aerts,Lida Kanari,Pawel Dlotko,Martina Scolamiero,Ran Levi,Julian C. Shillcock,Christiaan P. J. de Kock,Kathryn Hess,Henry Markram,Cheng Ly,Gary Marsat,Tom Gillespie,Malin Sandström,Mathew Abrams,Jeffrey S. Grethe,Maryann E. Martone,Robin De Gernier,Sergio Solinas,Christian Rössert,Marc Haelterman,Serge Massar,Valentina Pasquale,Vito Paolo Pastore,Sergio Martinoia,Paolo Massobrio,Cristiano Capone,Cristiano Capone,Núria Tort-Colet,Maria V. Sanchez-Vives,Maurizio Mattia,Ali Almasi,Ali Almasi,Shaun L. Cloherty,David B. Grayden,Yan T. Wong,Michael R. Ibbotson,Michael R. Ibbotson,Hamish Meffin,Hamish Meffin,Luke Y. Prince,Krasimira Tsaneva-Atanasova,Jack R. Mellor,Alberto Mazzoni,Manuela Rosa,Jacopo Carpaneto,Luigi Romito,Alberto Priori,Alberto Priori,Silvestro Micera,Silvestro Micera,Rosanna Migliore,Carmen Alina Lupascu,Francesco Franchina,Luca Leonardo Bologna,Armando Romani,Sára Sáray,Werner Van Geit,Szabolcs Káli,Alex M. Thomson,Audrey Mercer,Sigrun Lange,Joanne Falck,Eilif Muller,Felix Schürmann,Dmitrii I. Todorov,Robert A. Capps,William H. Barnett,Yaroslav I. Molkov,Federico Devalle,Federico Devalle,Diego Pazó,Ernest Montbrió,Gabriela Mochol,Habiba Azab,Benjamin Y. Hayden,Rubén Moreno-Bote,Pragathi Priyadharsini Balasubramani,Srinivasa Chakravarthy,Vignayanandam R. Muddapu,Medorian D. Gheorghiu,Bartul Mimica,Jonathan Withlock,Raul C. Mureșan,Jennifer L. Zick,Kelsey Schultz,Rachael K. Blackman,Rachael K. Blackman,Matthew V. Chafee,Matthew V. Chafee,Theoden I. Netoff,Nicholas L S Roberts,Vivek Nagaraj,Andrew Lamperski,Logan L. Grado,Matthew D. Johnson,David Darrow,Davide Lonardoni,Hayder Amin,Stefano Di Marco,Alessandro Maccione,Luca Berdondini,Thierry Nieus,Thierry Nieus,Marcel Stimberg,Dan F. M. Goodman,Thomas Nowotny,Veronika Koren,Valentin Dragoi,Klaus Obermayer,Samy Castro,Mariano Fernández,Wael El-Deredy,Kesheng Xu,Jean Paul Maidana,Patricio Orio,Weiliang Chen,Iain Hepburn,Francesco Casalegno,Adrien Devresse,Aleksandr Ovcharenko,Fernando Pereira,Fabien Delalondre,Erik De Schutter,Peter Bratby,Andrew R. Gallimore,Guido Klingbeil,Criseida Zamora,Yunliang Zang,Patrick Crotty,Eric Palmerduca,Alberto Antonietti,Claudia Casellato,Csaba Erö,Egidio D'Angelo,Marc-Oliver Gewaltig,Alessandra Pedrocchi,Ilja Bytschok,Dominik Dold,Johannes Schemmel,Karlheinz Meier,Mihai A. Petrovici,Mihai A. Petrovici,Hui-An Shen,Simone C. Surace,Jean-Pascal Pfister,Baptiste Lefebvre,Olivier Marre,Pierre Yger,Athanasia Papoutsi,Jiyoung Park,Ryan T. Ash,Stelios M. Smirnakis,Panayiota Poirazi,Richard A. Felix,Alexander G. Dimitrov,Christine V. Portfors,Silvia Daun,Silvia Daun,Tibor I. Toth,Joanna Jędrzejewska-Szmek,Nadine Kabbani,Kim T. Blackwel,Bahar Moezzi,Bahar Moezzi,Natalie Schaworonkow,Lukas Plogmacher,Mitchell R. Goldsworthy,Brenton Hordacre,Mark D. McDonnell,Nicolangelo Iannella,Nicolangelo Iannella,Michael C. Ridding,Jochen Triesch,Reinoud Maex,Karen Safaryan,Volker Steuber,Rongxiang Tang,Yi-Yuan Tang,Darya V. Verveyko,Alexey R. Brazhe,Andrey Yu. Verisokin,Dmitry E. Postnov,Cengiz Günay,Cengiz Günay,Gabriella Panuccio,Michele Giugliano,Astrid A. Prinz,Pablo Varona,Mikhail I. Rabinovich,Jack E. Denham,Thomas Ranner,Netta Cohen,Maria Reva,Nelson Rebola,Tekla Kirizs,Zoltan Nusser,David A. DiGregorio,Eirini Mavritsaki,Eirini Mavritsaki,Panos Rentzelas,Nikul H. Ukani,A. Tomkins,Chung-Heng Yeh,Wesley Bruning,Allison L. Fenichel,Yiyin Zhou,Yu-Chi Huang,Dorian Florescu,Carlos L. Ortiz,Paul Richmond,Chung-Chuan Lo,Daniel Coca,Ann-Shyn Chiang,Aurel A. Lazar,Jennifer Creaser,Congping Lin,Peter Ashwin,Jonathan T. Brown,Thomas Ridler,Daniel Levenstein,Daniel Levenstein,Brendon O. Watson,Brendon O. Watson,György Buzsáki,György Buzsáki,John Rinzel,John Rinzel,Rodica Curtu,Anh P. Nguyen,Sahand Assadzadeh,Peter A. Robinson,Paula Sanz-Leon,Caroline Garcia Forlim,Caroline Garcia Forlim,Lirio Onofre Baptista de Almeida,Reynaldo D. Pinto,Reynaldo D. Pinto,Francisco B. Rodriguez,Angel Lareo,Aaron Montero,Thiago Mosqueiro,Ramon Huerta,Ramon Huerta,Vinicio Changoluisa,Vinicio Changoluisa,Vinicius Lima Cordeiro,Cesar C. Ceballos,Nilton L. Kamiji,Antonio C. Roque,William W. Lytton,Andrew T. Knox,Joshua J. C. Rosenthal,Svitlana Popovych,Svitlana Popovych,Liqing Liu,Liqing Liu,Bin A. Wang,C. Grefkes,Gereon R. Fink,Nils Rosjat,Nils Rosjat,Abraham Perez-Trujillo,Andrés Espinal,Marco Aurelio Sotelo-Figueroa,Ivan Cruz-Aceves,Horacio Rostro-Gonzalez,Martin Zapotocky,Martin Zapotocky,Martina Hoskovcová,Jana Kopecká,Olga Ulmanová,Evžen Růžička,Matthias Gärtner,Sevil Duvarci,Jochen Roeper,Gaby Schneider,Stefan Albert,Katharina Schmack,Michiel W. H. Remme,Susanne Schreiber,Michele Migliore,Stefano M. Antonel,Jean-Denis Courcol,Sami Utku Çelikok,Eva M. Navarro-López,Neslihan Serap Sengor,Rahmi Elibol,Mustafa Özdemir,Tianyi Li,Angelo Arleo,Denis Sheynikhovich,Akihiro Nakamura,Masanori Shimono,Masanori Shimono,Youngjo Song,Sol Park,Ilhwan Choi,Jaeseung Jeong,Hee-Sup Shin,Sadra Sadeh,Padraig Gleeson,R. Angus Silver,Alexandra P. Chatzikalymniou,Alexandra P. Chatzikalymniou,Frances K. Skinner,Frances K. Skinner,Lazaro M. Sanchez-Rodriguez,Roberto C. Sotero,Loreen Hertäg,Owen Mackwood,Henning Sprekeler,Steffen Puhlmann,Simon Nikolaus Weber,David Higgins,Laura B. Naumann,Ramakrisnan Iyer,Stefan Mihalas,Valentina Ticcinelli,Tomislav Stankovski,Tomislav Stankovski,Peter V. E. McClintock,Aneta Stefanovska,Predrag Janjić,Dimitar Solev,Gerald Seifert,Ljupco Kocarev,Christian Steinhäuser,Mehrdad Salmasi,Stefan Glasauer,Martin B. Stemmler,Danke Zhang,Chi Zhang,Armen Stepanyants,Julia Goncharenko,Lieke Kros,Neil Davey,Chris I. De Zeeuw,Freek E. Hoebeek,Ankur Sinha,Roderick Adams,Michael Schmuker,Maria Psarrou,Maria J. Schilstra,Benjamin Torben-Nielsen,Christoph Metzner,Achim Schweikard,Tuomo Mäki-Marttunen,Bartosz Zurowski,Daniele Marinazzo,Luca Faes,Sebastiano Stramaglia,Henry O. C. Jordan,Simon M. Stringer,Elżbieta Gajewska-Dendek,Piotr Suffczynski,Nicoladie D. Tam,George Zouridakis,Luca Pollonini,Mojtaba Madadi Asl,Alireza Valizadeh,Peter A. Tass,Andreas Nold,Wei Fan,Sara Konrad,Heiko Endle,Johannes Vogt,Tatjana Tchumatchenko,Juliane Herpich,Christian Tetzlaff,Jannik Luboeinski,Timo Nachstedt,Manuel Ciba,Andreas Bahmer,Christiane Thielemann,Eric S. Kuebler,Joseph S. Tauskela,Jean-Philippe Thivierge,Rembrandt Bakker,Rembrandt Bakker,María García-Amado,Marian Evangelio,Francisco Clascá,Paul H. E. Tiesinga,Christopher L. Buckley,Taro Toyoizumi,Alexis Dubreuil,Rémi Monasson,Alessandro Treves,Davide Spalla,Sophie Rosay,Florence I. Kleberg,Willy Wong,Bruno de Oliveira Floriano,Toshihiko Matsuo,Tetsuya Uchida,Domenica Dibenedetto,Kâmil Uludağ,Abdorreza Goodarzinick,Maximilian Schmidt,Claus C. Hilgetag,Markus Diesmann,Sacha J. van Albada,Michael Jan Fauth,Mark C. W. van Rossum,Manuel Reyes-Sanchez,Rodrigo Amaducci,Carlos Muñiz,Irene Elices,David Arroyo,Rafael Levi,Rafael Levi,Ben Cohen,Carson C. Chow,Shashaank Vattikuti,Elena Bertolotti,Raffaella Burioni,Matteo di Volo,Matteo di Volo,Alessandro Vezzani,Bayar Menzat,Tim P. Vogels,Nobuhiko Wagatsuma,Susmita Saha,Reena Kapoor,Robert R. Kerr,John Wagner,Luis Carlos García del Molino,Guangyu R. Yang,Jorge F. Mejias,Xiao Jing Wang,Xiao Jing Wang,Hanbing Song,Joseph W. Goodliffe,Jennifer I. Luebke,Christina M. Weaver,John Thomas,Nishant Sinha,Nikhita Shaju,Nikhita Shaju,Tomasz Maszczyk,Jing Jin,Sydney S. Cash,Justin Dauwels,M. Brandon Westover,Maryam Karimian,Michelle Moerel,Peter De Weerd,Thomas Burwick,Ronald L. Westra,Romesh G. Abeysuriya,Jonathan Hadida,Stamatios N. Sotiropoulos,Saad Jbabdi,Mark W. Woolrich,Chama Bensmail,Chama Bensmail,Borys Wróbel,Xiaolong Zhou,Xiaolong Zhou,Zilong Ji,Xiao Liu,Yan Xia,Si Wu,Xiao Wang,Mingsha Zhang,Netanel Ofer,Orit Shefi,Gur Yaari,Ted Carnevale,Amit Majumdar,Subhashini Sivagnanam,Kenneth Yoshimoto,Elena Y. Smirnova,Dmitry V. Amakhin,Sergey L. Malkin,Aleksey V. Zaitsev,Anton V. Chizhov,Margarita Zaleshina,Alexander Zaleshin,Victor J. Barranca,George Zhu,Quinton M. Skilling,Daniel Maruyama,Nicolette Ognjanovski,Sara J. Aton,Michal Zochowski,Jiaxing Wu,Sara Aton,Scott Rich,Victoria Booth,Maral Budak,Salvador Dura-Bernal,Samuel A. Neymotin,Samuel A. Neymotin,Benjamin A. Suter,Gordon M. Shepherd,Melvin Felton,Alfred B. Yu,David L. Boothe,Kelvin S. Oie,Piotr J. Franaszczuk,Piotr J. Franaszczuk,Sergey Shuvaev,Batuhan Başerdem,Anthony M. Zador,Alexei A. Koulakov,Víctor J. López-Madrona,Ernesto Pereda,Claudio R. Mirasso,Santiago Canals,Stefano Masoli,Udaya Bhaskar Rongala,Anton Spanne,Henrik Jörntell,Calogero Maria Oddo,Alexander V. Vartanov,Anastasia K. Neklyudova,Stanislav A. Kozlovskiy,Andrey A. Kiselnikov,J. Marakshina,J. Marakshina,Maria Teleńczuk,Bartosz Telenczuk,Alain Destexhe,Paula T. Kuokkanen,Paula T. Kuokkanen,Anna Kraemer,Thomas McColgan,Catherine E. Carr,Richard Kempter +567 more
TL;DR: In this article, the authors used FAPESP Research, Disseminations and Innovation Center for Neuromathematics (CNPq) for postdoctoral research.
Journal ArticleDOI
Maps of interaural delay in the owl's nucleus laminaris
Catherine E. Carr,Sahil Shah,Thomas McColgan,Go Ashida,Paula T. Kuokkanen,Sandra Brill,Richard Kempter,Hermann Wagner +7 more
TL;DR: Measurements of presynaptic conduction delay, combined with a model of delay line conduction velocity, reveal that conduction delays can account for the mediolateral shifts in the map of ITD.
Posted ContentDOI
Community-based benchmarking improves spike inference from two-photon calcium imaging data
Philipp Berens,Jeremy Freeman,Thomas Deneux,Nicolay Chenkov,Thomas McColgan,Artur Speiser,Jakob H. Macke,Jakob H. Macke,Srinivas C. Turaga,Patrick J. Mineault,Peter Rupprecht,Stephan Gerhard,Rainer W. Friedrich,Johannes Friedrich,Liam Paninski,Marius Pachitariu,Kenneth D. Harris,Ben Bolte,Timothy A. Machado,Dario L. Ringach,Jacob Reimer,Emmanouil Froudarakis,Thomas Euler,Miroslav Roman-Roson,Lucas Theis,Andreas S. Tolias,Matthias Bethge +26 more
TL;DR: The results of the spikefinder challenge, launched to catalyze the development of new spike inference algorithms through crowd-sourcing, are reported, and ten of the submitted algorithms are presented which show improved performance compared to previously evaluated methods.
Journal ArticleDOI
Dipolar extracellular potentials generated by axonal projections.
TL;DR: It is established experimentally and theoretically that contributions of axons to EFPs can be significant and demonstrated that axonal terminal zones can produce E FPs with considerable amplitude and spatial reach.