T
Thomas Mock
Researcher at University of East Anglia
Publications - 103
Citations - 9168
Thomas Mock is an academic researcher from University of East Anglia. The author has contributed to research in topics: Thalassiosira pseudonana & Diatom. The author has an hindex of 38, co-authored 96 publications receiving 7576 citations. Previous affiliations of Thomas Mock include University of the East & Alfred Wegener Institute for Polar and Marine Research.
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Journal ArticleDOI
The Phaeodactylum genome reveals the evolutionary history of diatom genomes
Chris Bowler,Andrew E. Allen,Andrew E. Allen,Jonathan H. Badger,Jane Grimwood,Kamel Jabbari,Alan Kuo,Uma Maheswari,Cindy Martens,Florian Maumus,Robert Otillar,Edda Rayko,Asaf Salamov,Klaas Vandepoele,Bank Beszteri,Ansgar Gruber,Marc Heijde,Michael Katinka,Thomas Mock,Klaus Valentin,Frédéric Verret,John A. Berges,Colin Brownlee,Jean-Paul Cadoret,Anthony Chiovitti,Chang Jae Choi,Sacha Coesel,Alessandra De Martino,J. Chris Detter,Colleen A. Durkin,Angela Falciatore,Jérome Fournet,Miyoshi Haruta,Marie J. J. Huysman,Bethany D. Jenkins,Katerina Jiroutova,Richard E. Jorgensen,Yolaine Joubert,Aaron Kaplan,Nils Kröger,Peter G. Kroth,Erica Lindquist,Markus Lommer,Véronique Martin-Jézéquel,Pascal J. Lopez,Susan Lucas,Manuela Mangogna,Karen M. McGinnis,Linda K. Medlin,Anton Montsant,Anton Montsant,Marie-Pierre Oudot-Le Secq,Carolyn A. Napoli,Miroslav Oborník,Micaela S. Parker,Jean-Louis Petit,Betina M. Porcel,Nicole Poulsen,Matthew Robison,Leszek Rychlewski,Tatiana A. Rynearson,Jeremy Schmutz,Jeremy Schmutz,Harris Shapiro,Magali Siaut,Michele S. Stanley,Michael R. Sussman,Alison Taylor,Assaf Vardi,Peter von Dassow,Wim Vyverman,Anusuya Willis,Lucyan S. Wyrwicz,Daniel S. Rokhsar,Jean Weissenbach,E. Virginia Armbrust,Beverley R. Green,Yves Van de Peer,Igor V. Grigoriev +78 more
TL;DR: Analysis of molecular divergence compared with yeasts and metazoans reveals rapid rates of gene diversification in diatoms, and documents the presence of hundreds of genes from bacteria, likely to provide novel possibilities for metabolite management and for perception of environmental signals.
Journal ArticleDOI
The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing
Patrick J. Keeling,Patrick J. Keeling,Fabien Burki,Heather M. Wilcox,Bassem Allam,Eric E. Allen,Linda A. Amaral-Zettler,Linda A. Amaral-Zettler,E. Virginia Armbrust,John M. Archibald,John M. Archibald,Arvind K. Bharti,Callum J. Bell,Bank Beszteri,Kay D. Bidle,Connor Cameron,Lisa Campbell,David A. Caron,Rose Ann Cattolico,Jackie L. Collier,Kathryn J. Coyne,Simon K. Davy,Phillipe Deschamps,Sonya T. Dyhrman,Bente Edvardsen,Ruth D. Gates,Christopher J. Gobler,Spencer J. Greenwood,Stephanie Guida,Jennifer L. Jacobi,Kjetill S. Jakobsen,Erick R. James,Bethany D. Jenkins,Uwe John,Matthew D. Johnson,Andrew R. Juhl,Anja Kamp,Anja Kamp,Laura A. Katz,Ronald P. Kiene,Alexander Kudryavtsev,Alexander Kudryavtsev,Brian S. Leander,Senjie Lin,Connie Lovejoy,Denis H. Lynn,Denis H. Lynn,Adrian Marchetti,George B. McManus,Aurora M. Nedelcu,Susanne Menden-Deuer,Cristina Miceli,Thomas Mock,Marina Montresor,Mary Ann Moran,Shauna A. Murray,Govind Nadathur,Satoshi Nagai,Peter B. Ngam,Brian Palenik,Jan Pawlowski,Giulio Petroni,Gwenael Piganeau,Matthew C. Posewitz,Karin Rengefors,Giovanna Romano,Mary E. Rumpho,Tatiana A. Rynearson,Kelly B. Schilling,Declan C. Schroeder,Alastair G. B. Simpson,Alastair G. B. Simpson,Claudio H. Slamovits,Claudio H. Slamovits,David Roy Smith,G. Jason Smith,Sarah R. Smith,Heidi M. Sosik,Peter Stief,Edward C. Theriot,Scott N. Twary,Pooja E. Umale,Daniel Vaulot,Boris Wawrik,Glen L. Wheeler,William H. Wilson,Yan Xu,Adriana Zingone,Alexandra Z. Worden,Alexandra Z. Worden +89 more
TL;DR: In this paper, the authors describe a resource of 700 transcriptomes from marine microbial eukaryotes to help understand their role in the world's oceans and their biology, evolution, and ecology.
Journal ArticleDOI
Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas
Alexandra Z. Worden,Jae-Hyeok Lee,Thomas Mock,Pierre Rouzé,Melinda P. Simmons,Andrea Aerts,Andrew E. Allen,Marie L. Cuvelier,Marie L. Cuvelier,Evelyne Derelle,Meredith V. Everett,Elodie Foulon,Jane Grimwood,Jane Grimwood,Heidrun Gundlach,Bernard Henrissat,Carolyn A. Napoli,Sarah M. McDonald,Micaela S. Parker,Stephane Rombauts,Aasf Salamov,Peter von Dassow,Jonathan H. Badger,Pedro M. Coutinho,Elif Demir,Inna Dubchak,Chelle L. Gentemann,Wenche Eikrem,Jill E. Gready,Uwe John,William Lanier,Erika Lindquist,Susan Lucas,Klaus F. X. Mayer,Hervé Moreau,Fabrice Not,Robert Otillar,Olivier Panaud,Jasmyn Pangilinan,Ian T. Paulsen,Benoît Piégu,Aaron Poliakov,Steven Robbens,Jeremy Schmutz,Jeremy Schmutz,Eve Toulza,Tania Wyss,Alex N. Zelensky,Kemin Zhou,E. Virginia Armbrust,Debashish Bhattacharya,Ursula Goodenough,Yves Van de Peer,Igor V. Grigoriev +53 more
TL;DR: It is found that genomes from two isolates shared only 90% of their predicted genes, and divergence appears to have been facilitated by selection and acquisition processes that actively shape the repertoire of genes that are mutually exclusive between the two isolate differently than the core genes.
Journal ArticleDOI
Pan genome of the phytoplankton Emiliania underpins its global distribution
Betsy A. Read,Jessica Kegel,Mary J. Klute,Alan Kuo,Stephane C. Lefebvre,Florian Maumus,Christoph Mayer,John P. Miller,Adam Monier,Asaf Salamov,Jeremy R. Young,María Aguilar,Jean-Michel Claverie,Stephan Frickenhaus,Karina Gonzalez,Emily K. Herman,Yao-Cheng Lin,Johnathan A. Napier,Hiroyuki Ogata,Analissa F. Sarno,Jeremy Shmutz,Declan C. Schroeder,Colomban de Vargas,Frédéric Verret,Peter von Dassow,Klaus Valentin,Yves Van de Peer,Glen L. Wheeler,Joel B. Dacks,Charles F. Delwiche,Sonya T. Dyhrman,Sonya T. Dyhrman,Sonya T. Dyhrman,Gernot Glöckner,Uwe John,Thomas A. Richards,Alexandra Z. Worden,Xiaoyu Zhang,Igor V. Grigoriev,Andrew E. Allen,Kay D. Bidle,Kay D. Bidle,Mark Borodovsky,Chris Bowler,Colin Brownlee,Colin Brownlee,J. Mark Cock,Marek Eliáš,Vadim N. Gladyshev,Marco Groth,Chittibabu Guda,Ahmad R. Hadaegh,M. D. Iglesias-Rodriguez,Jerry Jenkins,Bethan M. Jones,Tracy Lawson,Florian Leese,Erika Lindquist,Alexei Lobanov,Alexandre Lomsadze,Shehre-Banoo Malik,Mary E. Marsh,Luke C. M. Mackinder,Thomas Mock,Bernd Mueller-Roeber,António Pagarete,Micaela S. Parker,Ian Probert,Hadi Quesneville,Christine A. Raines,Stefan A. Rensing,Stefan A. Rensing,Diego Mauricio Riaño-Pachón,Sophie Richier,Sophie Richier,Sebastian D. Rokitta,Yoshihiro Shiraiwa,Darren M. Soanes,Mark van der Giezen,Thomas M. Wahlund,Bryony A. P. Williams,Willie Wilson,Gordon Wolfe,Louie L. Wurch,Louie L. Wurch +84 more
TL;DR: Comparisons across strains demonstrate that E. huxleyi, which has long been considered a single species, harbours extensive genome variability reflected in different metabolic repertoires, and reveals a pan genome (core genes plus genes distributed variably between strains) probably supported by an atypical complement of repetitive sequence in the genome.
Journal ArticleDOI
A Model for Carbohydrate Metabolism in the Diatom Phaeodactylum tricornutum Deduced from Comparative Whole Genome Analysis
Peter G. Kroth,Anthony Chiovitti,Ansgar Gruber,Véronique Martin-Jézéquel,Thomas Mock,Micaela S. Parker,Michele S. Stanley,Aaron Kaplan,Lise Caron,Till Weber,N. Uma Maheswari,E. Virginia Armbrust,Chris Bowler +12 more
TL;DR: A detailed synthesis of carbohydrate metabolism in diatoms based on the genome sequences of Thalassiosira pseudonana and Phaeodactylum tricornutum is presented, which provides novel insights into acquisition of dissolved inorganic carbon and primary metabolic pathways of carbon in two different diats, which is of significance for an improved understanding of global carbon cycles.