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Host microbiota constantly control maturation and function of microglia in the CNS

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TLDR
It is determined that short-chain fatty acids (SCFA), microbiota-derived bacterial fermentation products, regulated microglia homeostasis and mice deficient for the SCFA receptor FFAR2 mirroredmicroglia defects found under GF conditions, suggesting that host bacteria vitally regulate microglian maturation and function.
Abstract
As the tissue macrophages of the CNS, microglia are critically involved in diseases of the CNS. However, it remains unknown what controls their maturation and activation under homeostatic conditions. We observed substantial contributions of the host microbiota to microglia homeostasis, as germ-free (GF) mice displayed global defects in microglia with altered cell proportions and an immature phenotype, leading to impaired innate immune responses. Temporal eradication of host microbiota severely changed microglia properties. Limited microbiota complexity also resulted in defective microglia. In contrast, recolonization with a complex microbiota partially restored microglia features. We determined that short-chain fatty acids (SCFA), microbiota-derived bacterial fermentation products, regulated microglia homeostasis. Accordingly, mice deficient for the SCFA receptor FFAR2 mirrored microglia defects found under GF conditions. These findings suggest that host bacteria vitally regulate microglia maturation and function, whereas microglia impairment can be rectified to some extent by complex microbiota.

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Inhomogeneous distribution of Iba-1 characterizes microglial pathology in Alzheimer's disease.

TL;DR: In thick sections immunolabeled for HLA‐DR or Iba‐1 dystrophic microglial processes lose their typical, homogeneous staining pattern and appear to be fragmented or clustered, and this may reflect alterations of the cytoskeleton ultimately leading to slow cytorrhexis.
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Development and function of tissue resident macrophages in mice.

TL;DR: The current view on macrophages development and tissue specification is presented and differences as well as common patterns between heterogeneous macrophage subpopulations are discussed.
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Impacts of foodborne inorganic nanoparticles on the gut microbiota-immune axis: potential consequences for host health.

TL;DR: The literature indicates that, in addition to evoking immune dysfunctions in the gut, inorganic NPs exhibit a moderate to extensive impact on intestinal microbiota composition and activity, highlighting a recurrent signature that favours colonization of the intestine by pathobionts at the expense of beneficial bacterial strains, as observed in IBD, CRC and obesity.
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Implications of the Gut Microbiome in Parkinson's Disease.

TL;DR: The gut microbiome changes in Parkinson's disease are reviewed and the mechanisms by which gut microbiome dysbiosis may be a contributing factor to the pathophysiology of Parkinson's Disease are discussed.
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Alpha-Synuclein Pathology and the Role of the Microbiota in Parkinson's Disease.

TL;DR: How changes in the gut environment can lead to pathology is discussed and the implications that advances in understanding the interactions between host and microbiota will have on future research and the development of potential biomarkers are outlined.
References
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Journal ArticleDOI

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.

TL;DR: By following this protocol, investigators are able to gain an in-depth understanding of the biological themes in lists of genes that are enriched in genome-scale studies.
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The gut microbiota shapes intestinal immune responses during health and disease

TL;DR: Findings indicating that developmental aspects of the adaptive immune system are influenced by bacterial colonization of the gut are discussed, and the possibility that the mammalian immune system, which seems to be designed to control microorganisms, is in fact controlled by microorganisms is raised.
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Fate Mapping Analysis Reveals That Adult Microglia Derive from Primitive Macrophages

TL;DR: Results identify microglia as an ontogenically distinct population in the mononuclear phagocyte system and have implications for the use of embryonically derived microglial progenitors for the treatment of various brain disorders.
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The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic Treg Cell Homeostasis

TL;DR: This study determined that short-chain fatty acids, gut microbiota–derived bacterial fermentation products, regulate the size and function of the colonic Treg pool and protect against colitis in a Ffar2-dependent manner in mice, revealing that a class of abundant microbial metabolites underlies adaptive immune microbiota coadaptation and promotes colonic homeostasis and health.
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GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

TL;DR: GOrilla is a web-based application that identifies enriched GO terms in ranked lists of genes, without requiring the user to provide explicit target and background sets, and its unique features and advantages over other threshold free enrichment tools include rigorous statistics, fast running time and an effective graphical representation.
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