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Yinlong Xie

Researcher at Beijing Genomics Institute

Publications -  26
Citations -  26352

Yinlong Xie is an academic researcher from Beijing Genomics Institute. The author has contributed to research in topics: Sequence assembly & Genome. The author has an hindex of 19, co-authored 26 publications receiving 20600 citations. Previous affiliations of Yinlong Xie include University of Hong Kong & South China University of Technology.

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SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

TL;DR: This work provides an updated assembly version of the 2008 Asian genome using SOAPdenovo2, a new algorithm design that reduces memory consumption in graph construction, resolves more repeat regions in contig assembly, increases coverage and length in scaffold construction, improves gap closing, and optimizes for large genome.

A global reference for human genetic variation

Adam Auton, +479 more
TL;DR: The 1000 Genomes Project as mentioned in this paper provided a comprehensive description of common human genetic variation by applying whole-genome sequencing to a diverse set of individuals from multiple populations, and reported the completion of the project, having reconstructed the genomes of 2,504 individuals from 26 populations using a combination of low-coverage whole genome sequencing, deep exome sequencing and dense microarray genotyping.
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Phylogenomics resolves the timing and pattern of insect evolution

Bernhard Misof, +105 more
- 07 Nov 2014 - 
TL;DR: The phylogeny of all major insect lineages reveals how and when insects diversified and provides a comprehensive reliable scaffold for future comparative analyses of evolutionary innovations among insects.
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The oyster genome reveals stress adaptation and complexity of shell formation

TL;DR: The sequencing and assembly of the oyster genome using short reads and a fosmid-pooling strategy and transcriptomes of development and stress response and the proteome of the shell are reported, showing that shell formation in molluscs is more complex than currently understood and involves extensive participation of cells and their exosomes.