Tohoku University

About: Tohoku University is a education organization based out in Sendai, Japan. It is known for research contribution in the topics: Magnetization & Alloy. The organization has 72116 authors who have published 170791 publications receiving 3941714 citations. The organization is also known as: Tōhoku daigaku.

Magnetic Reversal of the Ferroelectric Polarization in a Multiferroic Spinel Oxide

Abstract: Ferroelectric transition has been detected in a ferrimagnetic spinel oxide of CoCr2O4 upon the transition to the conical spin order below 25 K. The direction [110] of the spontaneous polarization is normal to both the magnetization easy axis [001] and to the propagation axis [110] of the transverse spiral component, in accord with the prediction based on the spin-current model. The reversal of the spontaneous magnetization by a small magnetic field (approximately 0.1 T) induces the reversal of the spontaneous polarization, indicating the clamping of the ferromagnetic and ferroelectric domain walls.

Tunable photoluminescence from graphene oxide.

Abstract: Graphene oxide (GO) is a graphene sheet modified with oxygen functional groups in the form of epoxy and hydroxy groups on the basal plane and various other types at the edges. It exhibits interesting steady-state photoluminescence (PL) properties. For example, low-energy fluorescence in red to near infrared (NIR) wavelengths (from 600– 1100 nm) has been detected for suspensions and solid thin films of as-synthesized GO. 3] In addition, broad luminescence from 400 to 800 nm from oxygen plasma-treated, mechanically exfoliated, single-layer graphene sheet has been reported. Blue fluorescence with a relatively narrow bandwidth when excited with UV irradiation has also been detected from chemically reduced GO (rGO) and graphene quantum dots. 6] Recently, chemically modified GO or rGO with n-butylamine or Mn has also demonstrated PL emission at a range of energies. 10] A detailed explanation of the origin of such variable energy PL in GO has yet to be elucidated. This is partly because the sample preparation and reduction methods varied, making it difficult to compare the results. Herein, we have prepared GO suspensions that exhibit virtually all of the PL features observed by different groups, through careful and gradual reduction of the GO. The systematic evolution of the electronic structure and comprehensive analysis of steady-state and transient PL along with photoluminescence excitation (PLE) spectroscopy measurements indicate that two different types of electronically excited states are responsible for the observed emission characteristics. GO was synthesized using the modified Hummers method, the details of which have been reported. GO usually contains a large fraction of sp hybridized carbon atoms bound to oxygen functional groups, which makes it an insulator. Reduction can be achieved chemically (e.g. hydrazine exposure) or by thermal annealing in inert environments. Photothermal reduction of GO can be achieved by exposing GO samples to a Xenon flash in ambient conditions. In this study, we prepared aqueous GO solutions and subjected them to steady-state Xe lamp irradiation (500 W) with different exposure times of up to three hours. In contrast to reduction by an instantaneous flash, this method provides a controllable, gradual transformation from GO to rGO, allowing exploration of the PL evolution and emission mechanisms from as-synthesized GO to rGO. The deoxygenation of GO after reduction was confirmed by X-ray photoelectron spectroscopy (XPS), as shown in Figure 1. The C 1s signals of the original GO can be deconvoluted into signals for the C=C bond in aromatic rings (284.6 eV), C O bond (286.1 eV), C=O bond (287.5 eV), and C(=O) OH bond (289.2 eV), in agreement with previous assignments. Increased sp carbon bonding with increased reduction time can be clearly measured, which

Molecular mechanisms of transcription activation by HLF and HIF1alpha in response to hypoxia: their stabilization and redox signal-induced interaction with CBP/p300.

Abstract: Hypoxia-inducible factor 1 alpha (HIF1alpha) and its related factor, HLF, activate expression of a group of genes such as erythropoietin in response to low oxygen. Transfection analysis using fusion genes of GAL4DBD with various fragments of the two factors delineated two transcription activation domains which are inducible in response to hypoxia and are localized in the C-terminal half. Their sequences are conserved between HLF and HIF1alpha. One is designated NAD (N-terminal activation domain), while the other is CAD (C-terminal activation domain). Immunoblot analysis revealed that NADs, which were rarely detectable at normoxia, became stabilized and accumulated at hypoxia, whereas CADs were constitutively expressed. In the mammalian two-hybrid system, CAD and NAD baits enhanced the luciferase expression from a reporter gene by co-transfection with CREB-binding protein (CBP) prey, whereas CAD, but not NAD, enhanced beta-galactosidase expression in yeast by CBP co-expression, suggesting that NAD and CAD interact with CBP/p300 by a different mechanism. Co-transfection experiments revealed that expression of Ref-1 and thioredoxin further enhanced the luciferase activity expressed by CAD, but not by NAD. Amino acid replacement in the sequences of CADs revealed a specific cysteine to be essential for their hypoxia-inducible interaction with CBP. Nuclear translocation of thioredoxin from cytoplasm was observed upon reducing O2 concentrations.

Parallelization of MAFFT for large-scale multiple sequence alignments.

Abstract: Summary We report an update for the MAFFT multiple sequence alignment program to enable parallel calculation of large numbers of sequences. The G-INS-1 option of MAFFT was recently reported to have higher accuracy than other methods for large data, but this method has been impractical for most large-scale analyses, due to the requirement of large computational resources. We introduce a scalable variant, G-large-INS-1, which has equivalent accuracy to G-INS-1 and is applicable to 50 000 or more sequences. Availability and implementation This feature is available in MAFFT versions 7.355 or later at https://mafft.cbrc.jp/alignment/software/mpi.html. Supplementary information Supplementary data are available at Bioinformatics online.