Repair of strand breaks by homologous recombination.
Maria Jasin,Rodney Rothstein +1 more
Reads0
Chats0
TLDR
The enzymology of the process is discussed, followed by studies on DSB repair in living cells, and a historical context for the current view of HR is provided and how DSBs are processed during HR as well as interactions with other D SB repair pathways are described.Abstract:
In this review, we discuss the repair of DNA double-strand breaks (DSBs) using a homologous DNA sequence (i.e., homologous recombination [HR]), focusing mainly on yeast and mammals. We provide a historical context for the current view of HR and describe how DSBs are processed during HR as well as interactions with other DSB repair pathways. We discuss the enzymology of the process, followed by studies on DSB repair in living cells. Whenever possible, we cite both original articles and reviews to aid the reader for further studies.read more
Citations
More filters
Journal ArticleDOI
Machine-learning algorithms based on personalized pathways for a novel predictive model for the diagnosis of hepatocellular carcinoma
TL;DR: Wang et al. as mentioned in this paper developed a predictive model for hepatocellular carcinoma (HCC) diagnosis using personalized biological pathways combined with a machine learning algorithm based on regularized regression and carry out relevant examinations.
Dissertation
Targeting DNA repair pathways for cancer therapy
TL;DR: The results increased the knowledge about dependency of cancer cells to DNA repair pathways of ROS-induced lesions that can be employed for the development of promising anti-tumor therapies, and highlighted the phenotypic lethality of OGG1 inhibition with tumors.
Journal ArticleDOI
Arabidopsis INCURVATA2 Regulates Salicylic Acid and Abscisic Acid Signaling, and Oxidative Stress Responses
Rosa Micol-Ponce,Ana Belén Sánchez-García,Qian Xu,Jose M. Barrero,José Luis Micol,María Rosa Ponce +5 more
TL;DR: A role for ICU2 is uncovered in the regulation of genes involved in ABA signaling as well as in SA biosynthesis and accumulation, and the icu2-1 mutant plants showed high tolerance to the oxidative stress produced by 3-amino-1,2,4-triazole (3-AT).
Book ChapterDOI
Assembling the human resectosome on DNA curtains
TL;DR: Methods for purification and single-molecule imaging and analysis of EXO1, DNA2, and BLM are described and how to adapt resection assays to the high-throughput single- molecule DNA curtain assay is described.
Journal ArticleDOI
Homologous Recombination: A GRAS Yeast Genome Editing Tool
TL;DR: Several types of yeast genome edits are discussed then focus on HR and its inherent potential for evolving novel wine yeast strains and styles relevant for changing markets.
References
More filters
Journal ArticleDOI
A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek,Krzysztof Chylinski,Krzysztof Chylinski,Ines Fonfara,Michael H. Hauer,Jennifer A. Doudna,Emmanuelle Charpentier +6 more
TL;DR: This study reveals a family of endonucleases that use dual-RNAs for site-specific DNA cleavage and highlights the potential to exploit the system for RNA-programmable genome editing.
Journal ArticleDOI
Multiplex Genome Engineering Using CRISPR/Cas Systems
Le Cong,Le Cong,F. Ann Ran,F. Ann Ran,David M. Cox,David M. Cox,Shuailiang Lin,Shuailiang Lin,Robert P. J. Barretto,Naomi Habib,Patrick D. Hsu,Patrick D. Hsu,Xuebing Wu,Wenyan Jiang,Luciano A. Marraffini,Feng Zhang +15 more
TL;DR: The type II prokaryotic CRISPR (clustered regularly interspaced short palindromic repeats)/Cas adaptive immune system has been shown to facilitate RNA-guided site-specific DNA cleavage as discussed by the authors.
Multiplex Genome Engineering Using CRISPR/Cas Systems
Le Cong,F. A. Ran,David Benjamin Turitz Cox,Shuailiang Lin,Robert P. J. Barretto,Naomi Habib,Patrick D. Hsu,Xuebing Wu,Wenyan Jiang,Luciano A. Marraffini,Feng Zhang +10 more
TL;DR: Two different type II CRISPR/Cas systems are engineered and it is demonstrated that Cas9 nucleases can be directed by short RNAs to induce precise cleavage at endogenous genomic loci in human and mouse cells, demonstrating easy programmability and wide applicability of the RNA-guided nuclease technology.
Journal ArticleDOI
RNA-Guided Human Genome Engineering via Cas9
Prashant Mali,Luhan Yang,Kevin M. Esvelt,John Aach,Marc Güell,James E. DiCarlo,Julie E. Norville,George M. Church,George M. Church +8 more
TL;DR: The type II bacterial CRISPR system is engineer to function with custom guide RNA (gRNA) in human cells to establish an RNA-guided editing tool for facile, robust, and multiplexable human genome engineering.
Journal ArticleDOI
Efficient genome editing in zebrafish using a CRISPR-Cas system
Woong Y. Hwang,Yanfang Fu,Deepak Reyon,Morgan L. Maeder,Shengdar Q. Tsai,Jeffry D. Sander,Randall T. Peterson,Randall T. Peterson,Jing-Ruey J. Yeh,J. Keith Joung +9 more
TL;DR: It is shown that the CRISPR-Cas system functions in vivo to induce targeted genetic modifications in zebrafish embryos with efficiencies similar to those obtained using zinc finger nucleases and transcription activator-like effector nucleases.