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Journal ArticleDOI
TL;DR: Recent progress in electronic skin or e‐skin research is broadly reviewed, focusing on technologies needed in three main applications: skin‐attachable electronics, robotics, and prosthetics.
Abstract: Recent progress in electronic skin or e-skin research is broadly reviewed, focusing on technologies needed in three main applications: skin-attachable electronics, robotics, and prosthetics. First, since e-skin will be exposed to prolonged stresses of various kinds and needs to be conformally adhered to irregularly shaped surfaces, materials with intrinsic stretchability and self-healing properties are of great importance. Second, tactile sensing capability such as the detection of pressure, strain, slip, force vector, and temperature are important for health monitoring in skin attachable devices, and to enable object manipulation and detection of surrounding environment for robotics and prosthetics. For skin attachable devices, chemical and electrophysiological sensing and wireless signal communication are of high significance to fully gauge the state of health of users and to ensure user comfort. For robotics and prosthetics, large-area integration on 3D surfaces in a facile and scalable manner is critical. Furthermore, new signal processing strategies using neuromorphic devices are needed to efficiently process tactile information in a parallel and low power manner. For prosthetics, neural interfacing electrodes are of high importance. These topics are discussed, focusing on progress, current challenges, and future prospects.

881 citations


Book
19 Dec 2019
TL;DR: Hume has captured the nature of this intense debate in a classic work that has stood the test of time as mentioned in this paper, where the relentless inquirer and empiricist David Hume assembles a group to discuss the existence of God, his divine nature, his attributes, and the point of his creation.
Abstract: Humankind has pondered many mysteries, but few more enticing than the existence of a divine creator who is said to have set the universe in motion. Imitating the well-known style of Platonic dialogues, the relentless inquirer and empiricist David Hume assembles a group to discuss the existence of God, his divine nature, his attributes, and the point of his creation. How do we come to have knowledge of God? Who has the burden of proof with respect to these matters of intense religious significance, and what sort of proof might gain universal assent? Can one argue from the orderliness of the universe to the conclusion that it must have had a purposeful creator at its helm? Hume has captured the nature of this intense debate in a classic work that has stood the test of time.

881 citations


PatentDOI
TL;DR: This work describes the synthesis and crystal structures of three porous ZIFs that are expanded analogues of zeolite A; their cage walls are functionalized, and their metal ions can be changed without changing the underlying LTA topology.
Abstract: The disclosure provides for multivariant zeolitic imidazolate frameworks (ZIFs), methods of making thereof, and methods of use therefrom.

881 citations


Journal ArticleDOI
27 Feb 2015-Science
TL;DR: Systems integration for global sustainability is poised for more rapid development, and transformative changes aimed at connecting disciplinary silos are needed to sustain an increasingly telecoupled world.
Abstract: Global sustainability challenges, from maintaining biodiversity to providing clean air and water, are closely interconnected yet often separately studied and managed. Systems integration—holistic approaches to integrating various components of coupled human and natural systems—is critical to understand socioeconomic and environmental interconnections and to create sustainability solutions. Recent advances include the development and quantification of integrated frameworks that incorporate ecosystem services, environmental footprints, planetary boundaries, human-nature nexuses, and telecoupling. Although systems integration has led to fundamental discoveries and practical applications, further efforts are needed to incorporate more human and natural components simultaneously, quantify spillover systems and feedbacks, integrate multiple spatial and temporal scales, develop new tools, and translate findings into policy and practice. Such efforts can help address important knowledge gaps, link seemingly unconnected challenges, and inform policy and management decisions.

881 citations


Journal ArticleDOI
TL;DR: The detection of SARS-CoV-2 in wastewater in early stages of the spread of COVID-19 highlights the relevance of this strategy as an early indicator of the infection within a specific population.

881 citations


Posted Content
TL;DR: This work proposes Trained Ternary Quantization (TTQ), a method that can reduce the precision of weights in neural networks to ternary values to improve the accuracy of some models (32, 44, 56-layer ResNet) on CIFAR-10 and AlexNet on ImageNet.
Abstract: Deep neural networks are widely used in machine learning applications. However, the deployment of large neural networks models can be difficult to deploy on mobile devices with limited power budgets. To solve this problem, we propose Trained Ternary Quantization (TTQ), a method that can reduce the precision of weights in neural networks to ternary values. This method has very little accuracy degradation and can even improve the accuracy of some models (32, 44, 56-layer ResNet) on CIFAR-10 and AlexNet on ImageNet. And our AlexNet model is trained from scratch, which means it's as easy as to train normal full precision model. We highlight our trained quantization method that can learn both ternary values and ternary assignment. During inference, only ternary values (2-bit weights) and scaling factors are needed, therefore our models are nearly 16x smaller than full-precision models. Our ternary models can also be viewed as sparse binary weight networks, which can potentially be accelerated with custom circuit. Experiments on CIFAR-10 show that the ternary models obtained by trained quantization method outperform full-precision models of ResNet-32,44,56 by 0.04%, 0.16%, 0.36%, respectively. On ImageNet, our model outperforms full-precision AlexNet model by 0.3% of Top-1 accuracy and outperforms previous ternary models by 3%.

881 citations


Journal ArticleDOI
06 Jun 2017-JAMA
TL;DR: More than 1 million pregnant women had gestational weight gain greater than or less than guideline recommendations, compared with weight gain within recommended levels, was associated with higher risk of adverse maternal and infant outcomes.
Abstract: Importance Body mass index (BMI) and gestational weight gain are increasing globally. In 2009, the Institute of Medicine (IOM) provided specific recommendations regarding the ideal gestational weight gain. However, the association between gestational weight gain consistent with theIOM guidelines and pregnancy outcomes is unclear. Objective To perform a systematic review, meta-analysis, and metaregression to evaluate associations between gestational weight gain above or below the IOM guidelines (gain of 12.5-18 kg for underweight women [BMI Data Sources and Study Selection Search of EMBASE, Evidence-Based Medicine Reviews, MEDLINE, and MEDLINE In-Process between January 1, 1999, and February 7, 2017, for observational studies stratified by prepregnancy BMI category and total gestational weight gain. Data Extraction and Synthesis Data were extracted by 2 independent reviewers. Odds ratios (ORs) and absolute risk differences (ARDs) per live birth were calculated using a random-effects model based on a subset of studies with available data. Main Outcomes and Measures Primary outcomes were small for gestational age (SGA), preterm birth, and large for gestational age (LGA). Secondary outcomes were macrosomia, cesarean delivery, and gestational diabetes mellitus. Results Of 5354 identified studies, 23 (n = 1 309 136 women) met inclusion criteria. Gestational weight gain was below or above guidelines in 23% and 47% of pregnancies, respectively. Gestational weight gain below the recommendations was associated with higher risk of SGA (OR, 1.53 [95% CI, 1.44-1.64]; ARD, 5% [95% CI, 4%-6%]) and preterm birth (OR, 1.70 [1.32-2.20]; ARD, 5% [3%-8%]) and lower risk of LGA (OR, 0.59 [0.55-0.64]; ARD, −2% [−10% to −6%]) and macrosomia (OR, 0.60 [0.52-0.68]; ARD, −2% [−3% to −1%]); cesarean delivery showed no significant difference (OR, 0.98 [0.96-1.02]; ARD, 0% [−2% to 1%]). Gestational weight gain above the recommendations was associated with lower risk of SGA (OR, 0.66 [0.63-0.69]; ARD, −3%; [−4% to −2%]) and preterm birth (OR, 0.77 [0.69-0.86]; ARD, −2% [−2% to −1%]) and higher risk of LGA (OR, 1.85 [1.76-1.95]; ARD, 4% [2%-5%]), macrosomia (OR, 1.95 [1.79-2.11]; ARD, 6% [4%-9%]), and cesarean delivery (OR, 1.30 [1.25-1.35]; ARD, 4% [3%-6%]). Gestational diabetes mellitus could not be evaluated because of the nature of available data. Conclusions and Relevance In this systematic review and meta-analysis of more than 1 million pregnant women, 47% had gestational weight gain greater than IOM recommendations and 23% had gestational weight gain less than IOM recommendations. Gestational weight gain greater than or less than guideline recommendations, compared with weight gain within recommended levels, was associated with higher risk of adverse maternal and infant outcomes.

881 citations


Posted Content
TL;DR: This paper proposed a hybrid pointer-generator network that can copy words from the source text via pointing, which aids accurate reproduction of information, while retaining the ability to produce novel words through the generator.
Abstract: Neural sequence-to-sequence models have provided a viable new approach for abstractive text summarization (meaning they are not restricted to simply selecting and rearranging passages from the original text). However, these models have two shortcomings: they are liable to reproduce factual details inaccurately, and they tend to repeat themselves. In this work we propose a novel architecture that augments the standard sequence-to-sequence attentional model in two orthogonal ways. First, we use a hybrid pointer-generator network that can copy words from the source text via pointing, which aids accurate reproduction of information, while retaining the ability to produce novel words through the generator. Second, we use coverage to keep track of what has been summarized, which discourages repetition. We apply our model to the CNN / Daily Mail summarization task, outperforming the current abstractive state-of-the-art by at least 2 ROUGE points.

881 citations


Journal ArticleDOI
TL;DR: A multiancestry genome-wide-association meta-analysis in 521,612 individuals and discovered 22 new stroke risk loci and eleven new susceptibility loci indicate mechanisms not previously implicated in stroke pathophysiology, with prioritization of risk variants and genes accomplished through bioinformatics analyses using extensive functional datasets.
Abstract: Stroke has multiple etiologies, but the underlying genes and pathways are largely unknown. We conducted a multiancestry genome-wide-association meta-analysis in 521,612 individuals (67,162 cases and 454,450 controls) and discovered 22 new stroke risk loci, bringing the total to 32. We further found shared genetic variation with related vascular traits, including blood pressure, cardiac traits, and venous thromboembolism, at individual loci (n = 18), and using genetic risk scores and linkage-disequilibrium-score regression. Several loci exhibited distinct association and pleiotropy patterns for etiological stroke subtypes. Eleven new susceptibility loci indicate mechanisms not previously implicated in stroke pathophysiology, with prioritization of risk variants and genes accomplished through bioinformatics analyses using extensive functional datasets. Stroke risk loci were significantly enriched in drug targets for antithrombotic therapy.

881 citations


Book ChapterDOI
01 Jan 2015
TL;DR: In the field of soil biology, the potential for an exciting, dynamic future if we understand it and apply its unifying principles can be found in the recent advances in genomic studies as discussed by the authors.
Abstract: Our science, based on a successful past, has great potential for an exciting, dynamic future if we understand it and apply its unifying principles. Advances in genomic studies are identifying multitudes of new soil biota. Automated, analytical instrumentation and modeling are characterizing soil organic matter and its dynamics. Soil nutrient transformations, plant–microbial interactions, substrate availability, and interactions with the soil matrix at the nanometer and micrometer levels must be understood. They also need to be interpreted to kilometer–megameter scales required for both global C and N cycling as well as an increased understanding of human resources. The turnover of soil organic matter, now considered to be primarily microbial products, controls nutrients such as phosphorus, sulfur, and metals. Our complex field requires a greater knowledge of physiological, ecological, and modeling concepts. These concepts must be integrated with information on soil characteristics and breakthroughs in methodology to understand the diversity, occurrence, and interactions of organisms with their environment.

881 citations


Journal ArticleDOI
TL;DR: Among patients hospitalized with mild-to-moderate Covid-19, the use of hydroxychloroquine, alone or with azithromycin, did not improve clinical status at 15 days as compared with standard care.
Abstract: Background Hydroxychloroquine and azithromycin have been used to treat patients with coronavirus disease 2019 (Covid-19). However, evidence on the safety and efficacy of these therapies is...

Journal ArticleDOI
TL;DR: This work demonstrates large reductions in error frequencies, especially for high-error-rate reads, by three independent means: filtering reads according to their expected number of errors, assembling overlapping read pairs and by exploiting unique sequence abundances to perform error correction.
Abstract: Motivation: Next-generation sequencing produces vast amounts of data with errors that are difficult to distinguish from true biological variation when coverage is low. Results: We demonstrate large reductions in error frequencies, especially for high-error-rate reads, by three independent means: (i) filtering reads according to their expected number of errors, (ii) assembling overlapping read pairs and (iii) for amplicon reads, by exploiting unique sequence abundances to perform error correction. We also show that most published paired read assemblers calculate incorrect posterior quality scores. Availability and implementation: These methods are implemented in the USEARCH package. Binaries are freely available at http://drive5.com/usearch. Contact: robert@drive5.com Supplementary information: Supplementary data are available at Bioinformatics online.

Journal ArticleDOI
Roel Aaij, Bernardo Adeva1, Marco Adinolfi2, A. A. Affolder3  +700 moreInstitutions (63)
TL;DR: In this paper, the performance of the various LHCb sub-detectors and the trigger system are described, using data taken from 2010 to 2012, and it is shown that the design criteria of the experiment have been met.
Abstract: The LHCb detector is a forward spectrometer at the Large Hadron Collider (LHC) at CERN. The experiment is designed for precision measurements of CP violation and rare decays of beauty and charm hadrons. In this paper the performance of the various LHCb sub-detectors and the trigger system are described, using data taken from 2010 to 2012. It is shown that the design criteria of the experiment have been met. The excellent performance of the detector has allowed the LHCb collaboration to publish a wide range of physics results, demonstrating LHCb's unique role, both as a heavy flavour experiment and as a general purpose detector in the forward region.

Proceedings ArticleDOI
14 Jun 2020
Abstract: Deploying convolutional neural networks (CNNs) on embedded devices is difficult due to the limited memory and computation resources. The redundancy in feature maps is an important characteristic of those successful CNNs, but has rarely been investigated in neural architecture design. This paper proposes a novel Ghost module to generate more feature maps from cheap operations. Based on a set of intrinsic feature maps, we apply a series of linear transformations with cheap cost to generate many ghost feature maps that could fully reveal information underlying intrinsic features. The proposed Ghost module can be taken as a plug-and-play component to upgrade existing convolutional neural networks. Ghost bottlenecks are designed to stack Ghost modules, and then the lightweight GhostNet can be easily established. Experiments conducted on benchmarks demonstrate that the proposed Ghost module is an impressive alternative of convolution layers in baseline models, and our GhostNet can achieve higher recognition performance (e.g. 75.7% top-1 accuracy) than MobileNetV3 with similar computational cost on the ImageNet ILSVRC-2012 classification dataset. Code is available at https://github.com/huawei-noah/ghostnet.

Posted Content
TL;DR: The authors proposed a finite context approach through stacked convolutions, which can be more efficient since they allow parallelization over sequential tokens and achieved state-of-the-art results on the WikiText-103 benchmark.
Abstract: The pre-dominant approach to language modeling to date is based on recurrent neural networks. Their success on this task is often linked to their ability to capture unbounded context. In this paper we develop a finite context approach through stacked convolutions, which can be more efficient since they allow parallelization over sequential tokens. We propose a novel simplified gating mechanism that outperforms Oord et al (2016) and investigate the impact of key architectural decisions. The proposed approach achieves state-of-the-art on the WikiText-103 benchmark, even though it features long-term dependencies, as well as competitive results on the Google Billion Words benchmark. Our model reduces the latency to score a sentence by an order of magnitude compared to a recurrent baseline. To our knowledge, this is the first time a non-recurrent approach is competitive with strong recurrent models on these large scale language tasks.

Journal ArticleDOI
01 May 2016-Cancer
TL;DR: The increasing burden of liver and intrahepatic bile duct (liver) cancers is highlighted in this annual report.
Abstract: and an incidence-based estimation of person-years of life lost because of the disease. By using NCHS multiple causes of death data, hepatitis C virus (HCV) and liver cancer-associated death rates were examined from 1999 through 2013. RESULTS: Among men and women of all major racial and ethnic groups, death rates continued to decline for all cancers combined and for most cancer sites; the overall cancer death rate (for both sexes combined) decreased by 1.5% per year from 2003 to 2012. Overall, incidence rates decreased among men and remained stable among women from 2003 to 2012. Among both men and women, deaths from liver cancer increased at the highest rate of all cancer sites, and liver cancer incidence rates increased sharply, second only to thyroid cancer. Men had more than twice the incidence rate of liver cancer than women, and rates increased with age for both sexes. Among nonHispanic (NH) white, NH black, and Hispanic men and women, liver cancer incidence rates were higher for persons born after the 1938 to 1947 birth cohort. In contrast, there was a minimal birth cohort effect for NH Asian and Pacific Islanders (APIs). NH black men and Hispanic men had the lowest median age at death (60 and 62 years, respectively) and the highest average person-years of life lost per death (21 and 20 years, respectively) from liver cancer. HCV and liver cancer-associated death rates were highest among decedents who were born during 1945 through 1965. CONCLUSIONS: Overall, cancer incidence and mortality declined among men; and, although cancer incidence was stable among women, mortality declined.The burden of liver cancer is growing and is not equally distributed throughout the population. Efforts to vaccinate populations that are vulnerable to hepatitis B virus (HBV) infection and to identify and treat those living with HCV or HBV infection, metabolic conditions, alcoholic liver disease, or other causes of cirrhosis can be effective in reducing the incidence and mortality of liver cancer.Cancer 2016;000:000-000. V C 2016 American Cancer Society.

Journal ArticleDOI
TL;DR: This model has been applied to reactions of all types in both organic and inorganic chemistry, including substitutions and eliminations, cycloadditions, and several types of organometallic reactions.
Abstract: The activation strain or distortion/interaction model is a tool to analyze activation barriers that determine reaction rates. For bimolecular reactions, the activation energies are the sum of the energies to distort the reactants into geometries they have in transition states plus the interaction energies between the two distorted molecules. The energy required to distort the molecules is called the activation strain or distortion energy. This energy is the principal contributor to the activation barrier. The transition state occurs when this activation strain is overcome by the stabilizing interaction energy. Following the changes in these energies along the reaction coordinate gives insights into the factors controlling reactivity. This model has been applied to reactions of all types in both organic and inorganic chemistry, including substitutions and eliminations, cycloadditions, and several types of organometallic reactions.

Journal ArticleDOI
22 Dec 2017-Science
TL;DR: A rapid astronomical search located the optical counterpart of the neutron star merger GW170817 and shows how these observations can be explained by an explosion known as a kilonova, which produces large quantities of heavy elements in nuclear reactions.
Abstract: On 17 August 2017, the Laser Interferometer Gravitational-Wave Observatory (LIGO) and the Virgo interferometer detected gravitational waves (GWs) emanating from a binary neutron star merger, GW170817. Nearly simultaneously, the Fermi and INTEGRAL (INTErnational Gamma-Ray Astrophysics Laboratory) telescopes detected a gamma-ray transient, GRB 170817A. At 10.9 hours after the GW trigger, we discovered a transient and fading optical source, Swope Supernova Survey 2017a (SSS17a), coincident with GW170817. SSS17a is located in NGC 4993, an S0 galaxy at a distance of 40 megaparsecs. The precise location of GW170817 provides an opportunity to probe the nature of these cataclysmic events by combining electromagnetic and GW observations.

Journal ArticleDOI
03 May 2017-Nature
TL;DR: Analysis of whole-genome sequences from cutaneous, acral and mucosal subtypes of melanoma reveals diverse carcinogenic processes across its subtypes, some unrelated to sun exposure, and extends potential involvement of the non-coding genome in its pathogenesis.
Abstract: Melanoma of the skin is a common cancer only in Europeans, whereas it arises in internal body surfaces (mucosal sites) and on the hands and feet (acral sites) in people throughout the world. Here we report analysis of whole-genome sequences from cutaneous, acral and mucosal subtypes of melanoma. The heavily mutated landscape of coding and non-coding mutations in cutaneous melanoma resolved novel signatures of mutagenesis attributable to ultraviolet radiation. However, acral and mucosal melanomas were dominated by structural changes and mutation signatures of unknown aetiology, not previously identified in melanoma. The number of genes affected by recurrent mutations disrupting non-coding sequences was similar to that affected by recurrent mutations to coding sequences. Significantly mutated genes included BRAF, CDKN2A, NRAS and TP53 in cutaneous melanoma, BRAF, NRAS and NF1 in acral melanoma and SF3B1 in mucosal melanoma. Mutations affecting the TERT promoter were the most frequent of all; however, neither they nor ATRX mutations, which correlate with alternative telomere lengthening, were associated with greater telomere length. Most melanomas had potentially actionable mutations, most in components of the mitogen-activated protein kinase and phosphoinositol kinase pathways. The whole-genome mutation landscape of melanoma reveals diverse carcinogenic processes across its subtypes, some unrelated to sun exposure, and extends potential involvement of the non-coding genome in its pathogenesis.

Journal ArticleDOI
TL;DR: Yeast-display evolution is used to improve the catalytic efficiency of APEX, enabling the use of electron microscopy to resolve the submitochondrial localization of calcium uptake regulatory protein MICU1 and superior enrichment of endogenous mitochondrial and endoplasmic reticulum membrane proteins.
Abstract: APEX is an engineered peroxidase that functions as an electron microscopy tag and a promiscuous labeling enzyme for live-cell proteomics. Because limited sensitivity precludes applications requiring low APEX expression, we used yeast-display evolution to improve its catalytic efficiency. APEX2 is far more active in cells, enabling the use of electron microscopy to resolve the submitochondrial localization of calcium uptake regulatory protein MICU1. APEX2 also permits superior enrichment of endogenous mitochondrial and endoplasmic reticulum membrane proteins.

Journal ArticleDOI
TL;DR: It is quantitatively shown that there indeed exists an explicit gradient for feature complexity in the ventral pathway of the human brain, and this provides strong support for the hypothesis that object categorization is a guiding principle in the functional organization of the primate ventral stream.
Abstract: Converging evidence suggests that the primate ventral visual pathway encodes increasingly complex stimulus features in downstream areas. We quantitatively show that there indeed exists an explicit gradient for feature complexity in the ventral pathway of the human brain. This was achieved by mapping thousands of stimulus features of increasing complexity across the cortical sheet using a deep neural network. Our approach also revealed a fine-grained functional specialization of downstream areas of the ventral stream. Furthermore, it allowed decoding of representations from human brain activity at an unsurpassed degree of accuracy, confirming the quality of the developed approach. Stimulus features that successfully explained neural responses indicate that population receptive fields were explicitly tuned for object categorization. This provides strong support for the hypothesis that object categorization is a guiding principle in the functional organization of the primate ventral stream.

Journal ArticleDOI
TL;DR: Analysis of gut microbiota composition in newborn to centenarian Japanese subjects revealed certain transition types of microbiota were enriched in infants, adults, elderly individuals and both infant and elderly subjects, and transporter property prediction results suggest that nutrients in the gut might play an important role in changing the Gut microbiota composition with age.
Abstract: It has been reported that the composition of human gut microbiota changes with age; however, few studies have used molecular techniques to investigate the long-term, sequential changes in gut microbiota composition. In this study, we investigated the sequential changes in gut microbiota composition in newborn to centenarian Japanese subjects. Fecal samples from 367 healthy Japanese subjects between the ages of 0 and 104 years were analyzed by high-throughput sequencing of amplicons derived from the V3-V4 region of the 16S rRNA gene. Analysis based on bacterial co-abundance groups (CAGs) defined by Kendall correlations between genera revealed that certain transition types of microbiota were enriched in infants, adults, elderly individuals and both infant and elderly subjects. More positive correlations between the relative abundances of genera were observed in the elderly-associated CAGs compared with the infant- and adult-associated CAGs. Hierarchical Ward’s linkage clustering based on the abundance of genera indicated five clusters, with median (interquartile range) ages of 3 (0–35), 33 (24–45), 42 (32–62), 77 (36–84) and 94 (86–98) years. Subjects were predominantly clustered with their matched age; however, some of them fell into mismatched age clusters. Furthermore, clustering based on the proportion of transporters predicted by phylogenetic investigation of communities by reconstruction of unobserved states (PICRUSt) showed that subjects were divided into two age-related groups, the adult-enriched and infant/elderly-enriched clusters. Notably, all the drug transporters based on Kyoto Encyclopedia of Genes and Genomes (KEGG) Orthology groups were found in the infant/elderly-enriched cluster. Our results indicate some patterns and transition points in the compositional changes in gut microbiota with age. In addition, the transporter property prediction results suggest that nutrients in the gut might play an important role in changing the gut microbiota composition with age.

Proceedings ArticleDOI
05 Nov 2016
TL;DR: This paper propose a machine reading simulator which processes text incrementally from left to right and performs shallow reasoning with memory and attention, enabling adaptive memory usage during recurrence with neural attention, offering a way to weakly induce relations among tokens.
Abstract: In this paper we address the question of how to render sequence-level networks better at handling structured input. We propose a machine reading simulator which processes text incrementally from left to right and performs shallow reasoning with memory and attention. The reader extends the Long Short-Term Memory architecture with a memory network in place of a single memory cell. This enables adaptive memory usage during recurrence with neural attention, offering a way to weakly induce relations among tokens. The system is initially designed to process a single sequence but we also demonstrate how to integrate it with an encoder-decoder architecture. Experiments on language modeling, sentiment analysis, and natural language inference show that our model matches or outperforms the state of the art.

Journal ArticleDOI
01 Jun 2015-Gut
TL;DR: CE exerts beneficial metabolic effects through improving HFHS diet-induced features of the metabolic syndrome, which is associated with a proportional increase in Akkermansia spp.
Abstract: Objective The increasing prevalence of obesity and type 2 diabetes (T2D) demonstrates the failure of conventional treatments to curb these diseases. The gut microbiota has been put forward as a key player in the pathophysiology of diet-induced T2D. Importantly, cranberry ( Vaccinium macrocarpon Aiton) is associated with a number of beneficial health effects. We aimed to investigate the metabolic impact of a cranberry extract (CE) on high fat/high sucrose (HFHS)-fed mice and to determine whether its consequent antidiabetic effects are related to modulations in the gut microbiota. Design C57BL/6J mice were fed either a chow or a HFHS diet. HFHS-fed mice were gavaged daily either with vehicle (water) or CE (200 mg/kg) for 8 weeks. The composition of the gut microbiota was assessed by analysing 16S rRNA gene sequences with 454 pyrosequencing. Results CE treatment was found to reduce HFHS-induced weight gain and visceral obesity. CE treatment also decreased liver weight and triglyceride accumulation in association with blunted hepatic oxidative stress and inflammation. CE administration improved insulin sensitivity, as revealed by improved insulin tolerance, lower homeostasis model assessment of insulin resistance and decreased glucose-induced hyperinsulinaemia during an oral glucose tolerance test. CE treatment was found to lower intestinal triglyceride content and to alleviate intestinal inflammation and oxidative stress. Interestingly, CE treatment markedly increased the proportion of the mucin-degrading bacterium Akkermansia in our metagenomic samples. Conclusions CE exerts beneficial metabolic effects through improving HFHS diet-induced features of the metabolic syndrome, which is associated with a proportional increase in Akkermansia spp. population.

Journal ArticleDOI
TL;DR: In this paper, the authors comprehensively survey the recent progress of NOMA in 5G systems, reviewing the state-of-the-art capacity analysis, power allocation strategies, user fairness, and user-pairing schemes in NOMAs.
Abstract: Non-orthogonal multiple access (NOMA) is one of the promising radio access techniques for performance enhancement in next-generation cellular communications. Compared to orthogonal frequency division multiple access (OFDMA), which is a well-known high-capacity orthogonal multiple access (OMA) technique, NOMA offers a set of desirable benefits, including greater spectrum efficiency. There are different types of NOMA techniques, including power-domain and code-domain. This paper primarily focuses on power-domain NOMA that utilizes superposition coding (SC) at the transmitter and successive interference cancellation (SIC) at the receiver. Various researchers have demonstrated that NOMA can be used effectively to meet both network-level and user-experienced data rate requirements of fifth-generation (5G) technologies. From that perspective, this paper comprehensively surveys the recent progress of NOMA in 5G systems, reviewing the state-of-the-art capacity analysis, power allocation strategies, user fairness, and user-pairing schemes in NOMA. In addition, this paper discusses how NOMA performs when it is integrated with various proven wireless communications techniques, such as cooperative communications, multiple input multiple output (MIMO), beamforming, space time coding, and network coding, among others. Furthermore, this paper discusses several important issues on NOMA implementation and provides some avenues for future research.

Journal ArticleDOI
TL;DR: In this article, the authors present a theoretical framework for the thermodynamics of information based on stochastic thermodynamics and fluctuation theorems, review some recent experimental results, and present an overview of the state of the art in the field.
Abstract: By its very nature, the second law of thermodynamics is probabilistic, in that its formulation requires a probabilistic description of the state of a system. This raises questions about the objectivity of the second law: does it depend, for example, on what we know about the system? For over a century, much effort has been devoted to incorporating information into thermodynamics and assessing the entropic and energetic costs of manipulating information. More recently, this historically theoretical pursuit has become relevant in practical situations where information is manipulated at small scales, such as in molecular and cell biology, artificial nano-devices or quantum computation. Here we give an introduction to a novel theoretical framework for the thermodynamics of information based on stochastic thermodynamics and fluctuation theorems, review some recent experimental results, and present an overview of the state of the art in the field. The task of integrating information into the framework of thermodynamics dates back to Maxwell and his infamous demon. Recent advances have made these ideas rigorous—and brought them into the laboratory.

Journal ArticleDOI
30 Jun 2016-Nature
TL;DR: Observations indicate that insolation, in part, sets the pace of the occurrence of millennial-scale events, including those associated with terminations and ‘unfinished terminations’.
Abstract: Oxygen isotope records from Chinese caves characterize changes in both the Asian monsoon and global climate. Here, using our new speleothem data, we extend the Chinese record to cover the full uranium/thorium dating range, that is, the past 640,000 years. The record’s length and temporal precision allow us to test the idea that insolation changes caused by the Earth’s precession drove the terminations of each of the last seven ice ages as well as the millennia-long intervals of reduced monsoon rainfall associated with each of the terminations. On the basis of our record’s timing, the terminations are separated by four or five precession cycles, supporting the idea that the ‘100,000-year’ ice age cycle is an average of discrete numbers of precession cycles. Furthermore, the suborbital component of monsoon rainfall variability exhibits power in both the precession and obliquity bands, and is nearly in anti-phase with summer boreal insolation. These observations indicate that insolation, in part, sets the pace of the occurrence of millennial-scale events, including those associated with terminations and ‘unfinished terminations’. Records of the Asian monsoon have been extended to 640,000 years ago, and confirm both that the 100,000-year ice age cycle results from integral numbers of precessional cycles and that insolation influences the pacing of major millennial-scale climate events. Prior records of the Asian monsoon have revealed cyclic variations over hundreds of thousands of years, probably driven by variations in insolation caused by the precession of Earth's orbit. Hai Cheng and colleagues now provide a speleothem record from Chinese cave samples that extends earlier records to 640,000 years ago, close to the maximum age possible with uranium/thorium dating. This spectacular record confirms that the characteristic '100,000-year' ice age cycle corresponds to an integral number (four or five) of precession cycles, and that insolation influences millennial-scale variations in monsoon strength.


Journal ArticleDOI
TL;DR: This review will focus on the components of the ECM and their role in both physiological and pathological (hypertrophic and keloid) cutaneous scar formation.
Abstract: Significance: When a cutaneous injury occurs, the wound heals via a dynamic series of physiological events, including coagulation, granulation tissue formation, re-epithelialization, and extracellular matrix (ECM) remodeling. The final stage can take many months, yet the new ECM forms a scar that never achieves the flexibility or strength of the original tissue. In certain circumstances, the normal scar is replaced by pathological fibrotic tissue, which results in hypertrophic or keloid scars. These scars cause significant morbidity through physical dysfunction and psychological stress. Recent Advances and Critical Issues: The cutaneous ECM comprises a complex assortment of proteins that was traditionally thought to simply provide structural integrity and scaffolding characteristics. However, recent findings show that the ECM has multiple functions, including, storage and delivery of growth factors and cytokines, tissue repair and various physiological functions. Abnormal ECM reconstruction during wound healing contributes to the formation of hypertrophic and keloid scars. Whereas adult wounds heal with scarring, the developing foetus has the ability to heal wounds in a scarless fashion by regenerating skin and restoring the normal ECM architecture, strength, and function. Recent studies show that the lack of inflammation in fetal wounds contributes to this perfect healing. Future Directions: Better understanding of the exact roles of ECM components in scarring will allow us to produce therapeutic agents to prevent hypertrophic and keloid scars. This review will focus on the components of the ECM and their role in both physiological and pathological (hypertrophic and keloid) cutaneous scar formation.

Journal ArticleDOI
TL;DR: The DNA sequence of K. pneumoniae isolates from around the world is determined and it is shown that there is a wide spectrum of diversity, including variation within shared sequences and gain and loss of whole genes, and there is an unrecognized association between the possession of specific gene profiles associated with virulence and antibiotic resistance.
Abstract: Klebsiella pneumoniae is now recognized as an urgent threat to human health because of the emergence of multidrug-resistant strains associated with hospital outbreaks and hypervirulent strains associated with severe community-acquired infections. K. pneumoniae is ubiquitous in the environment and can colonize and infect both plants and animals. However, little is known about the population structure of K. pneumoniae, so it is difficult to recognize or understand the emergence of clinically important clones within this highly genetically diverse species. Here we present a detailed genomic framework for K. pneumoniae based on whole-genome sequencing of more than 300 human and animal isolates spanning four continents. Our data provide genome-wide support for the splitting of K. pneumoniae into three distinct species, KpI (K. pneumoniae), KpII (K. quasipneumoniae), and KpIII (K. variicola). Further, for K. pneumoniae (KpI), the entity most frequently associated with human infection, we show the existence of >150 deeply branching lineages including numerous multidrug-resistant or hypervirulent clones. We show K. pneumoniae has a large accessory genome approaching 30,000 protein-coding genes, including a number of virulence functions that are significantly associated with invasive community-acquired disease in humans. In our dataset, antimicrobial resistance genes were common among human carriage isolates and hospital-acquired infections, which generally lacked the genes associated with invasive disease. The convergence of virulence and resistance genes potentially could lead to the emergence of untreatable invasive K. pneumoniae infections; our data provide the whole-genome framework against which to track the emergence of such threats.