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Open AccessJournal ArticleDOI

FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism

TLDR
A brain polyribosome-programmed translation system is developed, revealing that FMRP reversibly stalls ribosomes specifically on its target mRNAs and suggests multiple targets for clinical intervention in FXS and ASD.
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This article is published in Cell.The article was published on 2011-07-22 and is currently open access. It has received 1861 citations till now. The article focuses on the topics: FMR1 & RNA-binding protein.

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Disruption of DNA methylation-dependent long gene repression in Rett syndrome

TL;DR: A genome-wide length-dependent increase in gene expression is identified in MeCP2 mutant mouse models and human RTT brains, and it is found that long genes as a population are enriched for neuronal functions and selectively expressed in the brain.

Mutations causing syndromic autism define an axis of synaptic pathophysiology

TL;DR: In this article, the authors used electrophysiological and biochemical assays of neuronal protein synthesis in the hippocampus of Tsc2(+/-) and Fmr1(-/y) mice to show that synaptic dysfunction caused by these mutations actually falls at opposite ends of a physiological spectrum.
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A spectral approach integrating functional genomic annotations for coding and noncoding variants

TL;DR: Across varied scenarios, the Eigen score performs generally better than any single individual annotation, representing a powerful single functional score that can be incorporated in fine-mapping studies.
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Functional 5′ UTR mRNA structures in eukaryotic translation regulation and how to find them

TL;DR: This Review discusses known 5′ UTR RNA structures and how new structure probing technologies coupled with prospective validation, particularly compensatory mutagenesis, are likely to identify classes of structured RNA elements that shape post-transcriptional control of gene expression and the development of multicellular organisms.
Journal ArticleDOI

Molecular Mechanisms of Fragile X Syndrome: A Twenty-Year Perspective

TL;DR: Studies continue to refine the understanding of FMRP's role in synaptic plasticity and to uncover new functions of this protein, which have illuminated therapeutic approaches for FXS.
References
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Journal ArticleDOI

Controlling the false discovery rate: a practical and powerful approach to multiple testing

TL;DR: In this paper, a different approach to problems of multiple significance testing is presented, which calls for controlling the expected proportion of falsely rejected hypotheses -the false discovery rate, which is equivalent to the FWER when all hypotheses are true but is smaller otherwise.
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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.

TL;DR: By following this protocol, investigators are able to gain an in-depth understanding of the biological themes in lists of genes that are enriched in genome-scale studies.

Biometery: The principles and practice of statistics in biological research

TL;DR: In this paper, the authors present a model for the analysis of variance in a single-classification and two-way and multiway analysis of Variance with the assumption of correlation.
Book

Biometry: The Principles and Practice of Statistics in Biological Research

TL;DR: In this paper, the authors present a model for the analysis of variance in a single-classification and two-way and multiway analysis of Variance with the assumption of correlation.
Journal ArticleDOI

Linear Models and Empirical Bayes Methods for Assessing Differential Expression in Microarray Experiments

TL;DR: The hierarchical model of Lonnstedt and Speed (2002) is developed into a practical approach for general microarray experiments with arbitrary numbers of treatments and RNA samples and the moderated t-statistic is shown to follow a t-distribution with augmented degrees of freedom.
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