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Showing papers by "University of Reading published in 2010"


Journal ArticleDOI
TL;DR: The nature and extent of reported declines, and the potential drivers of pollinator loss are described, including habitat loss and fragmentation, agrochemicals, pathogens, alien species, climate change and the interactions between them are reviewed.
Abstract: Pollinators are a key component of global biodiversity, providing vital ecosystem services to crops and wild plants. There is clear evidence of recent declines in both wild and domesticated pollinators, and parallel declines in the plants that rely upon them. Here we describe the nature and extent of reported declines, and review the potential drivers of pollinator loss, including habitat loss and fragmentation, agrochemicals, pathogens, alien species, climate change and the interactions between them. Pollinator declines can result in loss of pollination services which have important negative ecological and economic impacts that could significantly affect the maintenance of wild plant diversity, wider ecosystem stability, crop production, food security and human welfare.

4,608 citations


Journal ArticleDOI
TL;DR: The present document has been written by a group of both academic and industry experts and aims to validate and expand the original idea of the prebiotic concept, defined as the selective stimulation of growth and/or activity of one or a limited number of microbial genus(era)/species in the gut microbiota that confer(s) health benefits to the host.
Abstract: The different compartments of the gastrointestinal tract are inhabited by populations of micro-organisms. By far the most important predominant populations are in the colon where a true symbiosis with the host exists that is a key for well-being and health. For such a microbiota, 'normobiosis' characterises a composition of the gut 'ecosystem' in which micro-organisms with potential health benefits predominate in number over potentially harmful ones, in contrast to 'dysbiosis', in which one or a few potentially harmful micro-organisms are dominant, thus creating a disease-prone situation. The present document has been written by a group of both academic and industry experts (in the ILSI Europe Prebiotic Expert Group and Prebiotic Task Force, respectively). It does not aim to propose a new definition of a prebiotic nor to identify which food products are classified as prebiotic but rather to validate and expand the original idea of the prebiotic concept (that can be translated in 'prebiotic effects'), defined as: 'The selective stimulation of growth and/or activity(ies) of one or a limited number of microbial genus(era)/species in the gut microbiota that confer(s) health benefits to the host.' Thanks to the methodological and fundamental research of microbiologists, immense progress has very recently been made in our understanding of the gut microbiota. A large number of human intervention studies have been performed that have demonstrated that dietary consumption of certain food products can result in statistically significant changes in the composition of the gut microbiota in line with the prebiotic concept. Thus the prebiotic effect is now a well-established scientific fact. The more data are accumulating, the more it will be recognised that such changes in the microbiota's composition, especially increase in bifidobacteria, can be regarded as a marker of intestinal health. The review is divided in chapters that cover the major areas of nutrition research where a prebiotic effect has tentatively been investigated for potential health benefits. The prebiotic effect has been shown to associate with modulation of biomarkers and activity(ies) of the immune system. Confirming the studies in adults, it has been demonstrated that, in infant nutrition, the prebiotic effect includes a significant change of gut microbiota composition, especially an increase of faecal concentrations of bifidobacteria. This concomitantly improves stool quality (pH, SCFA, frequency and consistency), reduces the risk of gastroenteritis and infections, improves general well-being and reduces the incidence of allergic symptoms such as atopic eczema. Changes in the gut microbiota composition are classically considered as one of the many factors involved in the pathogenesis of either inflammatory bowel disease or irritable bowel syndrome. The use of particular food products with a prebiotic effect has thus been tested in clinical trials with the objective to improve the clinical activity and well-being of patients with such disorders. Promising beneficial effects have been demonstrated in some preliminary studies, including changes in gut microbiota composition (especially increase in bifidobacteria concentration). Often associated with toxic load and/or miscellaneous risk factors, colon cancer is another pathology for which a possible role of gut microbiota composition has been hypothesised. Numerous experimental studies have reported reduction in incidence of tumours and cancers after feeding specific food products with a prebiotic effect. Some of these studies (including one human trial) have also reported that, in such conditions, gut microbiota composition was modified (especially due to increased concentration of bifidobacteria). Dietary intake of particular food products with a prebiotic effect has been shown, especially in adolescents, but also tentatively in postmenopausal women, to increase Ca absorption as well as bone Ca accretion and bone mineral density. Recent data, both from experimental models and from human studies, support the beneficial effects of particular food products with prebiotic properties on energy homaeostasis, satiety regulation and body weight gain. Together, with data in obese animals and patients, these studies support the hypothesis that gut microbiota composition (especially the number of bifidobacteria) may contribute to modulate metabolic processes associated with syndrome X, especially obesity and diabetes type 2. It is plausible, even though not exclusive, that these effects are linked to the microbiota-induced changes and it is feasible to conclude that their mechanisms fit into the prebiotic effect. However, the role of such changes in these health benefits remains to be definitively proven. As a result of the research activity that followed the publication of the prebiotic concept 15 years ago, it has become clear that products that cause a selective modification in the gut microbiota's composition and/or activity(ies) and thus strengthens normobiosis could either induce beneficial physiological effects in the colon and also in extra-intestinal compartments or contribute towards reducing the risk of dysbiosis and associated intestinal and systemic pathologies.

1,786 citations


Journal ArticleDOI
TL;DR: The El Nino-Southern Oscillation (ENSO) is a naturally occurring fluctuation that originates in the tropical Pacific region and affects ecosystems, agriculture, freshwater supplies, hurricanes and other severe weather events worldwide.
Abstract: The El Nino-Southern Oscillation (ENSO) is a naturally occurring fluctuation that originates in the tropical Pacific region and affects ecosystems, agriculture, freshwater supplies, hurricanes and other severe weather events worldwide. Under the influence of global warming, the mean climate of the Pacific region will probably undergo significant changes. The tropical easterly trade winds are expected to weaken; surface ocean temperatures are expected to warm fastest near the equator and more slowly farther away; the equatorial thermocline that marks the transition between the wind-mixed upper ocean and deeper layers is expected to shoal; and the temperature gradients across the thermocline are expected to become steeper. Year-to-year ENSO variability is controlled by a delicate balance of amplifying and damping feedbacks, and one or more of the physical processes that are responsible for determining the characteristics of ENSO will probably be modified by climate change. Therefore, despite considerable progress in our understanding of the impact of climate change on many of the processes that contribute to El Nino variability, it is not yet possible to say whether ENSO activity will be enhanced or damped, or if the frequency of events will change.

1,078 citations


Journal ArticleDOI
TL;DR: This study addresses the extent to which insecure and disorganized attachments increase risk for externalizing problems using meta-analysis and discusses the potential significance of attachment for mental health.
Abstract: This study addresses the extent to which insecure and disorganized attachments increase risk for externalizing problems using meta-analysis. From 69 samples (N = 5,947), the association between insecurity and externalizing problems was significant, d = 0.31 (95% CI: 0.23, 0.40). Larger effects were found for boys (d = 0.35), clinical samples (d = 0.49), and from observation-based outcome assessments (d = 0.58). Larger effects were found for attachment assessments other than the Strange Situation. Overall, disorganized children appeared at elevated risk (d = 0.34, 95% CI: 0.18, 0.50), with weaker effects for avoidance (d = 0.12, 95% CI: 0.03, 0.21) and resistance (d = 0.11, 95% CI: −0.04, 0.26). The results are discussed in terms of the potential significance of attachment for mental health.

1,067 citations


Journal ArticleDOI
TL;DR: In this paper, the development of this review article has evolved from work carried out by an international team of the International Space Science Institute (ISSI), Bern, Switzerland, and from work performed under the auspices of Scientific Committee on Solar Terrestrial Physics (SCOSTEP) regarding climate and weather of the Sun-Earth System (CAWSES).
Abstract: The development of this review article has evolved from work carried out by an international team of the International Space Science Institute (ISSI), Bern, Switzerland, and from work carried out under the auspices of Scientific Committee on Solar Terrestrial Physics (SCOSTEP) Climate and Weather of the Sun‐Earth System (CAWSES‐1). The support of ISSI in providing workshop and meeting facilities is acknowledged, especially support from Y. Calisesi and V. Manno. SCOSTEP is acknowledged for kindly providing financial assistance to allow the paper to be published under an open access policy. L.J.G. was supported by the UK Natural Environment Research Council (NERC) through their National Centre for Atmospheric Research (NCAS) Climate program. K.M. was supported by a Marie Curie International Outgoing Fellowship within the 6th European Community Framework Programme. J.L. acknowledges support by the EU/FP7 program Assessing Climate Impacts on the Quantity and Quality of Water (ACQWA, 212250) and from the DFG Project Precipitation in the Past Millennium in Europe (PRIME) within the Priority Program INTERDYNAMIK. L.H. acknowledges support from the U.S. NASA Living With a Star program. G.M. acknowledges support from the Office of Science (BER), U.S. Department of Energy, Cooperative Agreement DE‐FC02‐97ER62402, and the National Science Foundation. We also wish to thank Karin Labitzke and Markus Kunze for supplying an updated Figure 13, Andrew Heaps for technical support, and Paul Dickinson for editorial support. Part of the research was carried out under the SPP CAWSES funded by GFG. J.B. was financially supported by NCCR Climate–Swiss Climate Research.

1,045 citations


Journal ArticleDOI
TL;DR: Biochar was most effective, resulting in a 10 fold decrease of Cd in pore water and a resultant reduction in phytotoxicity, and the results highlight the potential of biochar for contaminated land remediation.

1,024 citations


Journal ArticleDOI
TL;DR: In this paper, the authors explore the emerging linkages and complementarities between the concepts of resilience and vulnerability to identify areas of synergy, with regard to theory, methodology, and application.
Abstract: Resilience and vulnerability represent two related yet different approaches to understanding the response of systems and actors to change; to shocks and surprises, as well as slow creeping changes. Their respective origins in ecological and social theory largely explain the continuing differences in approach to social-ecological dimensions of change. However, there are many areas of strong convergence. This paper explores the emerging linkages and complementarities between the concepts of resilience and vulnerability to identify areas of synergy. We do this with regard to theory, methodology, and application. The paper seeks to go beyond just recognizing the complementarities between the two approaches to demonstrate how researchers are actively engaging with each field to coproduce new knowledge, and to suggest promising areas of complementarity that are likely to further research and action in the field.

885 citations


Journal ArticleDOI
TL;DR: It is proposed that the assessment of trait–service clusters will represent a crucial step in ecosystem service monitoring and in balancing the delivery of multiple, and sometimes conflicting, services in ecosystem management.
Abstract: Managing ecosystems to ensure the provision of multiple ecosystem services is a key challenge for applied ecology. Functional traits are receiving increasing attention as the main ecological attributes by which different organisms and biological communities influence ecosystem services through their effects on underlying ecosystem processes. Here we synthesize concepts and empirical evidence on linkages between functional traits and ecosystem services across different trophic levels. Most of the 247 studies reviewed considered plants and soil invertebrates, but quantitative trait–service associations have been documented for a range of organisms and ecosystems, illustrating the wide applicability of the trait approach. Within each trophic level, specific processes are affected by a combination of traits while particular key traits are simultaneously involved in the control of multiple processes. These multiple associations between traits and ecosystem processes can help to identify predictable trait–service clusters that depend on several trophic levels, such as clusters of traits of plants and soil organisms that underlie nutrient cycling, herbivory, and fodder and fibre production. We propose that the assessment of trait–service clusters will represent a crucial step in ecosystem service monitoring and in balancing the delivery of multiple, and sometimes conflicting, services in ecosystem management.

817 citations


Journal ArticleDOI
TL;DR: In this article, the authors examine the co-evolution of MNE activities and institutions external and internal to the firm, and highlight the scope for firm-level creativity and institutional entrepreneurship that may lead to coevolution with the environment.
Abstract: This paper examines the co-evolution of MNE activities and institutions external and internal to the firm. We develop a theoretical framework for this analysis that draws on the more recent writings of Douglass North on institutions as a response to complex forms of uncertainty associated with the rise in global economic interconnectedness, and of Richard Nelson on the co-evolution of technology and institutions. We link historical changes in the character of MNE activities to changes in the institutional environment, and highlight the scope for firm-level creativity and institutional entrepreneurship that may lead to co-evolution with the environment. We argue that the main drivers for institutional entrepreneurship are now found in the increasing autonomy of MNE subsidiaries. Thus MNE agency derives from more decentralized forms of experimentation in international corporate networks, which competence-creating nodes of new initiatives can co-evolve with local institutions. Unlike most other streams of related literature, our approach connects patterns of institutional change in wider business systems with more micro processes of variety generation and experimentation within and across individual firms. This form of co-evolutionary analysis is increasingly important to understanding the interrelationships between MNE activities and public policy.

795 citations


Journal ArticleDOI
10 Dec 2010-Science
TL;DR: A group of papers analyzes pathogen genomes to find the roots of virulence, opportunism, and life-style determinants in plant pathogens, suggesting that most effectors represent species-specific adaptations.
Abstract: Powdery mildews are phytopathogens whose growth and reproduction are entirely dependent on living plant cells. The molecular basis of this life-style, obligate biotrophy, remains unknown. We present the genome analysis of barley powdery mildew, Blumeria graminis f.sp. hordei (Blumeria), as well as a comparison with the analysis of two powdery mildews pathogenic on dicotyledonous plants. These genomes display massive retrotransposon proliferation, genome-size expansion, and gene losses. The missing genes encode enzymes of primary and secondary metabolism, carbohydrate-active enzymes, and transporters, probably reflecting their redundancy in an exclusively biotrophic life-style. Among the 248 candidate effectors of pathogenesis identified in the Blumeria genome, very few (less than 10) define a core set conserved in all three mildews, suggesting that most effectors represent species-specific adaptations.

744 citations


Journal ArticleDOI
TL;DR: Variable-temperature SAXS analysis shows that the healable polymeric blend has a nanophase-separated morphology and that the X-ray contrast between the two types of domain increases with increasing temperature, a feature that is repeatable over several heating and cooling cycles.
Abstract: An elastomeric, healable, supramolecular polymer blend comprising a chain-folding polyimide and a telechelic polyurethane with pyrenyl end groups is compatibilized by aromatic π−π stacking between the π-electron-deficient diimide groups and the π-electron-rich pyrenyl units. This interpolymer interaction is the key to forming a tough, healable, elastomeric material. Variable-temperature FTIR analysis of the bulk material also conclusively demonstrates the presence of hydrogen bonding, which complements the π−π stacking interactions. Variable-temperature SAXS analysis shows that the healable polymeric blend has a nanophase-separated morphology and that the X-ray contrast between the two types of domain increases with increasing temperature, a feature that is repeatable over several heating and cooling cycles. A fractured sample of this material reproducibly regains more than 95% of the tensile modulus, 91% of the elongation to break, and 77% of the modulus of toughness of the pristine material.

Journal ArticleDOI
TL;DR: No-tillage farming offers a way of optimizing productivity and ecosystem services, offering a wide range of economic, environmental and social benefits to the producer and to the society as discussed by the authors.
Abstract: In 1999 no-tillage farming, synonymous of zero tillage farming or conservation agriculture, was adopted on about 45 million ha world wide, growing to 72 million ha in 2003 and to 111 million ha in 2009, corresponding to an growth rate of 6 million ha per annum. Fastest adoption rates have been experienced in South America where some countries are using no-tillage farming on about 70% of the total cultivated area. Opposite to countries like the USA where often fields under no-tillage farming are tilled every now and then, more than two thirds of the area under no-tillage systems in South America is permanently not tilled; in other words once adopted, the soil is never tilled again. The spread of no-tillage systems on more than 110 million ha world-wide shows the great adaptability of the systems to all kinds of climates, soils and cropping conditions. No-tillage is now being practiced from the artic circle over the tropics to about 50o latitude south, from sea level to 3 , 000 m altitude, from extremely rainy areas with 2 , 500 mm a year to extremely dry conditions with 250 mm a year. No-till farming offers a way of optimizing productivity and ecosystem services, offering a wide range of economic, environmental and social benefits to the producer and to the society. At the same time, no-till farming is enabling agriculture to respond to some of the global challenges associated with climate change, land and environmental degradation, and increasing cost of food, energy and production inputs. The wide recognition of no-till farming as a truly sustainable system should ensure the spread of the no-till technology and the associated practices of organic soil cover and crop rotation, as soon as the barriers to its adoption have been overcome, to areas where adoption is currently still low. The widespread adoption globally also shows that no-tillage farming cannot any more be considered a temporary fashion or a craze; instead largely through farmers’ own effort, the system has established itself as a farming practice and a different way of thinking about sustainable agro-ecosystem management that can no longer be ignored by scientists, academics, extension workers, farmers at large as well as equipment and machine manufacturers and politicians. Keywords: w orld-wide no-till adoption , zero tillage adoption , conservation agriculture, soil health, climate change, ecosystem services DOI: 10.3965/j.issn.1934-6344.20 1 0.0 1 .0-0 Citation: Rolf D erpsch , Theodor F riedrich , Amir K assam, Li H ongwen . Current status of adoption of no-till farming in the world and some of its main benefits . Int J Agric & Biol Eng, 20 1 0; 3 ( 1 ): ...read more

Journal ArticleDOI
TL;DR: The role that polyphenols play in the prevention of cancer, cardiovascular disease and neurodegeneration is provided and epidemiological data, human intervention study findings, as well as animal and in vitro studies in support of these actions are presented.
Abstract: Polyphenols are found ubiquitously in plants and their regular consumption has been associated with a reduced risk of a number of chronic diseases, including cancer, cardiovascular disease (CVD) and neurodegenerative disorders. Rather than exerting direct antioxidant effects, the mechanisms by which polyphenols express these beneficial properties appear to involve their interaction with cellular signaling pathways and related machinery that mediate cell function under both normal and pathological conditions. We illustrate that their interactions with two such pathways, the MAP kinase (ERK, JNK, p38) and PI3 kinase/Akt signaling cascades, allow them to impact upon normal and abnormal cell function, thus influencing the cellular processes involved in the initiation and progression of cancer, CVD and neurodegeneration. For example, their ability to activate ERK in neurons leads to a promotion of neuronal survival and cognitive enhancements, both of which influence the progression of Alzheimer's disease, whilst ERK activation by polyphenols in vascular endothelial cells influences nitric oxide production, blood pressure and ultimately CVD risk. The main focus of this review is to provide an overview of the role that polyphenols play in the prevention of cancer, cardiovascular disease and neurodegeneration. We present epidemiological data, human intervention study findings, as well as animal and in vitro studies in support of these actions and in each case we consider how their actions at the cellular level may underpin their physiological effects.

Journal ArticleDOI
TL;DR: Although synergistic interactions among traits remain to be explored, individual traits can be useful in predicting and understanding responses of related species to global change.

Journal ArticleDOI
TL;DR: This review sets the background for defining a dietary prebiotic as ‘‘a selectively fermented ingredient that results in specific changes in the composition and/or activity of the gastrointestinal microbiota, thus conferring benefit(s) upon host health’’.
Abstract: In November 2008, a group of scientists met at the 6th Meeting of the International Scientific Association of Probiotics and Prebiotics (ISAPP) in London, Ontario, Canada, to discuss the functionality of prebiotics As a result of this, it was concluded that the prebiotic field is currently dominated by gastrointestinal events However, in the future, it may be the case that other mixed microbial ecosystems may be modulated by a prebiotic approach, such as the oral cavity, skin and the urogenital tract Therefore, a decision was taken to build upon the current prebiotic status and define a niche for ‘dietary prebiotics’ This review is co-authored by the working group of ISAPP scientists and sets the background for defining a dietary prebiotic as ‘‘a selectively fermented ingredient that results in specific changes in the composition and/or activity of the gastrointestinal microbiota, thus conferring benefit(s) upon host health’’

Journal ArticleDOI
TL;DR: The data support the view that honey bees are in decline at least in some regions, which is probably closely linked to the decreasing number of beekeepers.
Abstract: Growing evidence indicates that European managed honey bees are in decline, but information for Europe remains patchy and localized. Here we compile data from 18 European countries to assess trends in the number of honey bee colonies and beekeepers between 1965 and 2005. We found consistent declines in colony numbers in central European countries and some increases in Mediterranean countries. Beekeeper numbers have declined in all of the European countries examined. Our data support the view that honey bees are in decline at least in some regions, which is probably closely linked to the decreasing number of beekeepers. Our data on colony numbers and beekeepers must, however, be interpreted with caution due to different approaches and socioeconomic factors in the various countries, thereby limiting their comparability. We therefore make specific recommendations for standardized methodologies to be adopted at the national and global level to assist in the future monitoring of honey bees.

Book ChapterDOI
01 Jan 2010
TL;DR: In international business the term cooperative venture is often used merely to signify some alternative to 100 per cent equity ownership of a foreign affiliate; it may indicate a joint venture (JV), an industrial collaboration agreement, licensing, franchising, subcontracting, or even a management contract or countertrade agreement as mentioned in this paper.
Abstract: To what extent are cooperative ventures really cooperative? What exactly is meant by cooperation in this context? In international business the term cooperative venture is often used merely to signify some alternative to 100 per cent equity ownership of a foreign affiliate; it may indicate a joint venture (JV), an industrial collaboration agreement, licensing, franchising, subcontracting, or even a management contract or countertrade agreement. It is quite possible, of course, to regard such arrangements as cooperative by definition, but this fudges the substantive issue of just how cooperative these arrangements really are.

Journal ArticleDOI
Ewen F. Kirkness1, Brian J. Haas2, Brian J. Haas1, Weilin Sun3, Henk R. Braig4, M. Alejandra Perotti5, John M. Clark6, Si Hyeock Lee7, Hugh M. Robertson3, Ryan C. Kennedy8, Eran Elhaik9, Daniel Gerlach10, Daniel Gerlach11, Evgenia V. Kriventseva10, Evgenia V. Kriventseva11, Christine G. Elsik12, Christine G. Elsik13, Dan Graur9, Catherine A. Hill14, Jan A. Veenstra15, Brian P. Walenz1, Jose M. C. Tubio16, José M. C. Ribeiro17, Julio Rozas18, J. Spencer Johnston12, Justin T. Reese12, Aleksandar Popadić19, Marta Tojo16, Didier Raoult, David L. Reed20, Yoshinori Tomoyasu21, Yoshinori Tomoyasu22, Emily C. Kraus21, Omprakash Mittapalli23, Venu M. Margam14, Hongmei Li3, Jason M. Meyer14, Reed M. Johnson3, Jeanne Romero-Severson8, Janice P. Vanzee14, David Alvarez-Ponce18, Filipe G. Vieira18, Montserrat Aguadé18, Sara Guirao-Rico18, Juan Manuel Anzola12, Kyong Sup Yoon6, Joseph P. Strycharz6, Maria F. Unger8, Scott Christley8, Neil F. Lobo8, Manfredo J. Seufferheld, NaiKuan Wang, Gregory A. Dasch24, Claudio J. Struchiner25, Greg Madey8, Linda Hannick1, Shelby L. Bidwell1, Vinita Joardar1, Elisabet Caler1, Renfu Shao26, Stephen C. Barker26, Stephen L. Cameron, Robert V. Bruggner8, Allison A. Regier8, Justin Johnson1, Lakshmi D. Viswanathan1, T. Utterback1, Granger G. Sutton1, Daniel Lawson, Robert M. Waterhouse10, Robert M. Waterhouse11, J. Craig Venter1, Robert L. Strausberg1, May R. Berenbaum, Frank H. Collins8, Evgeny M. Zdobnov11, Evgeny M. Zdobnov10, Evgeny M. Zdobnov27, Barry R. Pittendrigh 
TL;DR: The genome sequences of the body louse and its primary bacterial endosymbiont Candidatus Riesia pediculicola are presented, providing a reference for studies of holometabolous insects.
Abstract: As an obligatory parasite of humans, the body louse (Pediculus humanus humanus) is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. Here, we present genome sequences of the body louse and its primary bacterial endosymbiont Candidatus Riesia pediculicola. The body louse has the smallest known insect genome, spanning 108 Mb. Despite its status as an obligate parasite, it retains a remarkably complete basal insect repertoire of 10,773 protein-coding genes and 57 microRNAs. Representing hemimetabolous insects, the genome of the body louse thus provides a reference for studies of holometabolous insects. Compared with other insect genomes, the body louse genome contains significantly fewer genes associated with environmental sensing and response, including odorant and gustatory receptors and detoxifying enzymes. The unique architecture of the 18 minicircular mitochondrial chromosomes of the body louse may be linked to the loss of the gene encoding the mitochondrial single-stranded DNA binding protein. The genome of the obligatory louse endosymbiont Candidatus Riesia pediculicola encodes less than 600 genes on a short, linear chromosome and a circular plasmid. The plasmid harbors a unique arrangement of genes required for the synthesis of pantothenate, an essential vitamin deficient in the louse diet. The human body louse, its primary endosymbiont, and the bacterial pathogens that it vectors all possess genomes reduced in size compared with their free-living close relatives. Thus, the body louse genome project offers unique information and tools to use in advancing understanding of coevolution among vectors, symbionts, and pathogens.

Journal ArticleDOI
TL;DR: The morphology of the reproductive organs and pollen number, and changes in anther protein expression, were studied in response to high temperature at anthesis in three rice genotypes, and the role of differentially expressed proteins and morphology during anther dehiscence and pollination in shaping heat tolerance and susceptibility is discussed.
Abstract: Episodes of high temperature at anthesis, which in rice is the most sensitive stage to temperature, are expected to occur more frequently in future climates. The morphology of the reproductive organs and pollen number, and changes in anther protein expression, were studied in response to high temperature at anthesis in three rice (Oryza sativa L.) genotypes. Plants were exposed to 6 h of high (38 °C) and control (29 °C) temperature at anthesis and spikelets collected for morphological and proteomic analysis. Moroberekan was the most heat-sensitive genotype (18% spikelet fertility at 38 °C), while IR64 (48%) and N22 (71%) were moderately and highly heat tolerant, respectively. There were significant differences among the genotypes in anther length and width, apical and basal pore lengths, apical pore area, and stigma and pistil length. Temperature also affected some of these traits, increasing anther pore size and reducing stigma length. Nonetheless, variation in the number of pollen on the stigma could not be related to measured morphological traits. Variation in spikelet fertility was highly correlated (r=0.97, n=6) with the proportion of spikelets with ≥20 germinated pollen grains on the stigma. A 2D-gel electrophoresis showed 46 protein spots changing in abundance, of which 13 differentially expressed protein spots were analysed by MS/MALDI-TOF. A cold and a heat shock protein were found significantly up-regulated in N22, and this may have contributed to the greater heat tolerance of N22. The role of differentially expressed proteins and morphology during anther dehiscence and pollination in shaping heat tolerance and susceptibility is discussed.

Journal ArticleDOI
TL;DR: In this paper, a simple method to diagnose the eddy-driven component of the flow using the low-level wind field (925-700 hpa) was presented to identify the North Atlantic winter season in ERA-40 reanalysis.
Abstract: Much of the atmospheric variability in the North Atlantic sector is associated with variations in the eddy-driven component of the zonal flow. Here we present a simple method to specifically diagnose this component of the flow using the low-level wind field (925–700 hpa ). We focus on the North Atlantic winter season in the ERA-40 reanalysis. Diagnostics of the latitude and speed of the eddy-driven jet stream are compared with conventional diagnostics of the North Atlantic Oscillation (NAO) and the East Atlantic (EA) pattern. This shows that the NAO and the EA both describe combined changes in the latitude and speed of the jet stream. It is therefore necessary, but not always sufficient, to consider both the NAO and the EA in identifying changes in the jet stream. The jet stream analysis suggests that there are three preferred latitudinal positions of the North Atlantic eddy-driven jet stream in winter. This result is in very good agreement with the application of a statistical mixture model to the two-dimensional state space defined by the NAO and the EA. These results are consistent with several other studies which identify four European/Atlantic regimes, comprising three jet stream patterns plus European blocking events. Copyright © 2010 Royal Meteorological Society

Journal ArticleDOI
TL;DR: The aim of the comparison overall is to understand the complexity required to model energy and water exchanges in urban areas and to identify those modeling approaches that minimize the errors in the simulated fluxes of the urban energy balance.
Abstract: A large number of urban surface energy balance models now exist with different assumptions about the important features of the surface and exchange processes that need to be incorporated To date, no comparison of these models has been conducted; in contrast, models for natural surfaces have been compared extensively as part of the Project for Intercomparison of Land-surface Parameterization Schemes Here, the methods and first results from an extensive international comparison of 33 models are presented The aim of the comparison overall is to understand the complexity required to model energy and water exchanges in urban areas The degree of complexity included in the models is outlined and impacts on model performance are discussed During the comparison there have been significant developments in the models with resulting improvements in performance (root-mean-square error falling by up to two-thirds) Evaluation is based on a dataset containing net all-wave radiation, sensible heat, and latent heat flux observations for an industrial area in Vancouver, British Columbia, Canada The aim of the comparison is twofold: to identify those modeling approaches that minimize the errors in the simulated fluxes of the urban energy balance and to determine the degree of model complexity required for accurate simulations There is evidence that some classes of models perform better for individual fluxes but no model performs best or worst for all fluxes In general, the simpler models perform as well as the more complex models based on all statistical measures Generally the schemes have best overall capability to model net all-wave radiation and least capability to model latent heat flux

Journal ArticleDOI
TL;DR: In this paper, a fully nonlinear particle filter is proposed for higher dimensional problems by exploiting the freedom of the proposal density inherent in particle filtering, which can be applied to high dimensional problems.
Abstract: Almost all research fields in geosciences use numerical models and observations and combine these using data-assimilation techniques. With ever-increasing resolution and complexity, the numerical models tend to be highly nonlinear and also observations become more complicated and their relation to the models more nonlinear. Standard data-assimilation techniques like (ensemble) Kalman filters and variational methods like 4D-Var rely on linearizations and are likely to fail in one way or another. Nonlinear data-assimilation techniques are available, but are only efficient for small-dimensional problems, hampered by the so-called ‘curse of dimensionality’. Here we present a fully nonlinear particle filter that can be applied to higher dimensional problems by exploiting the freedom of the proposal density inherent in particle filtering. The method is illustrated for the three-dimensional Lorenz model using three particles and the much more complex 40-dimensional Lorenz model using 20 particles. By also applying the method to the 1000-dimensional Lorenz model, again using only 20 particles, we demonstrate the strong scale-invariance of the method, leading to the optimistic conjecture that the method is applicable to realistic geophysical problems. Copyright c � 2010 Royal

Journal ArticleDOI
TL;DR: In this article, the authors present Global Warming Potentials (GWPs) as these have traditionally been used in the implementation of climate policy, and discuss the uncertainties in these estimates, and the ranking of the various components with respect to their confidence in the given metric values is also given.

Journal ArticleDOI
TL;DR: In this paper, the authors investigate whether and to what extent a wide range of actors in the UK are adapting to climate change, and whether this is evidence of a social transition, and they find that adaptation has been dominated by government initiatives and has principally occurred in the form of research into climate change impacts.
Abstract: This paper investigates whether and to what extent a wide range of actors in the UK are adapting to climate change, and whether this is evidence of a social transition. We document evidence of over 300 examples of early adopters of adaptation practice to climate change in the UK. These examples span a range of activities from small adjustments (or coping), to building adaptive capacity, to implementing actions and to creating deeper systemic change in public and private organisations in a range of sectors. We find that adaptation in the UK has been dominated by government initiatives and has principally occurred in the form of research into climate change impacts. These government initiatives have stimulated a further set of actions at other scales in public agencies, regulatory agencies and regional government (and the devolved administrations), though with little real evidence of climate change adaptation initiatives trickling down to local government level. The sectors requiring significant investment in large scale infrastructure have invested more heavily than those that do not in identifying potential impacts and adaptations. Thus we find a higher level of adaptation activity by the water supply and flood defence sectors. Sectors that are not dependent on large scale infrastructure appear to be investing far less effort and resources in preparing for climate change. We conclude that the UK government-driven top-down targeted adaptation approach has generated anticipatory action at low cost in some areas. We also conclude that these actions may have created enough niche activities to allow for diffusion of new adaptation practices in response to real or perceived climate change. These results have significant implications for how climate policy can be developed to support autonomous adaptors in the UK and other countries.

Journal ArticleDOI
TL;DR: This tutorial review focusses upon the key chemical concepts that have been successfully utilised in the design of healable polymeric materials.
Abstract: Given the extensive use of polymers in the modern age with applications ranging from aerospace components to microcircuitry, the ability to regain the mechanical and physical characteristics of complex pristine materials after damage is an attractive proposition. This tutorial review focusses upon the key chemical concepts that have been successfully utilised in the design of healable polymeric materials.

Journal ArticleDOI
16 Apr 2010-Lipids
TL;DR: There appears to be an enormous mis-match between the evidence from long-term prospective studies and perceptions of harm from the consumption of dairy food items.
Abstract: The health effects of milk and dairy food consumption would best be determined in randomised controlled trials. No adequately powered trial has been reported and none is likely because of the numbers required. The best evidence comes, therefore, from prospective cohort studies with disease events and death as outcomes. Medline was searched for prospective studies of dairy food consumption and incident vascular disease and Type 2 diabetes, based on representative population samples. Reports in which evaluation was in incident disease or death were selected. Meta-analyses of the adjusted estimates of relative risk for disease outcomes in these reports were conducted. Relevant case–control retrospective studies were also identified and the results are summarised in this article. Meta-analyses suggest a reduction in risk in the subjects with the highest dairy consumption relative to those with the lowest intake: 0.87 (0.77, 0.98) for all-cause deaths, 0.92 (0.80, 0.99) for ischaemic heart disease, 0.79 (0.68, 0.91) for stroke and 0.85 (0.75, 0.96) for incident diabetes. The number of cohort studies which give evidence on individual dairy food items is very small, but, again, there is no convincing evidence of harm from consumption of the separate food items. In conclusion, there appears to be an enormous mis-match between the evidence from long-term prospective studies and perceptions of harm from the consumption of dairy food items.

Proceedings ArticleDOI
29 Jan 2010
TL;DR: This paper describes the crowd image analysis challenge that forms part of the PETS 2009 workshop and uses new or existing systems for i) crowd count and density estimation, ii) tracking of individual(s) within a crowd, and iii) detection of separate flows and specific crowd events, in a real-world environment.

Journal ArticleDOI
TL;DR: In this paper, a process-based fire regime model (SPITFIRE) was developed, coupled with ecosystem dynamics in the LPJ Dynamic Global Vegetation Model, and used to explore fire regimes and the current impact of fire on the terrestrial carbon cycle and associated emissions of trace atmospheric constituents.
Abstract: . A process-based fire regime model (SPITFIRE) has been developed, coupled with ecosystem dynamics in the LPJ Dynamic Global Vegetation Model, and used to explore fire regimes and the current impact of fire on the terrestrial carbon cycle and associated emissions of trace atmospheric constituents. The model estimates an average release of 2.24 Pg C yr−1 as CO2 from biomass burning during the 1980s and 1990s. Comparison with observed active fire counts shows that the model reproduces where fire occurs and can mimic broad geographic patterns in the peak fire season, although the predicted peak is 1–2 months late in some regions. Modelled fire season length is generally overestimated by about one month, but shows a realistic pattern of differences among biomes. Comparisons with remotely sensed burnt-area products indicate that the model reproduces broad geographic patterns of annual fractional burnt area over most regions, including the boreal forest, although interannual variability in the boreal zone is underestimated.

Journal ArticleDOI
TL;DR: The scalings of metabolic rate, population growth rate, and production efficiency with body size have changed across the evolutionary transitions, showing Kleiber’s 3/4 power scaling law does not apply universally across organisms.
Abstract: The diversification of life involved enormous increases in size and complexity. The evolutionary transitions from prokaryotes to unicellular eukaryotes to metazoans were accompanied by major innovations in metabolic design. Here we show that the scalings of metabolic rate, population growth rate, and production efficiency with body size have changed across the evolutionary transitions. Metabolic rate scales with body mass superlinearly in prokaryotes, linearly in protists, and sublinearly in metazoans, so Kleiber's 3/4 power scaling law does not apply universally across organisms. The scaling of maximum population growth rate shifts from positive in prokaryotes to negative in protists and metazoans, and the efficiency of production declines across these groups. Major changes in metabolic processes during the early evolution of life overcame existing constraints, exploited new opportunities, and imposed new constraints.

Journal ArticleDOI
TL;DR: The UK Energy Research Centre (UKERC) as mentioned in this paper conducted an independent, thorough and systematic review of the evidence, with the aim of establishing the current state of knowledge, identifying key uncertainties and improving consensus.