J
Johanna Schleutker
Researcher at Turku University Hospital
Publications - 217
Citations - 13369
Johanna Schleutker is an academic researcher from Turku University Hospital. The author has contributed to research in topics: Prostate cancer & Cancer. The author has an hindex of 50, co-authored 202 publications receiving 11537 citations. Previous affiliations of Johanna Schleutker include deCODE genetics & National Institutes of Health.
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Journal ArticleDOI
REVEL: An Ensemble Method for Predicting the Pathogenicity of Rare Missense Variants
Nilah M. Ioannidis,Joseph H. Rothstein,Joseph H. Rothstein,Vikas Pejaver,Sumit Middha,Shannon K. McDonnell,Saurabh Baheti,Anthony M. Musolf,Qing Li,Emily R. Holzinger,Danielle M. Karyadi,Lisa A. Cannon-Albright,Craig C. Teerlink,Janet L. Stanford,William B. Isaacs,Jianfeng Xu,Kathleen A. Cooney,Kathleen A. Cooney,Ethan M. Lange,Johanna Schleutker,John D. Carpten,Isaac J. Powell,Olivier Cussenot,Geraldine Cancel-Tassin,Graham G. Giles,Graham G. Giles,Robert J. MacInnis,Robert J. MacInnis,Christiane Maier,Chih-Lin Hsieh,Fredrik Wiklund,William J. Catalona,William D. Foulkes,Diptasri Mandal,Rosalind A. Eeles,Zsofia Kote-Jarai,Carlos Bustamante,Daniel J. Schaid,Trevor Hastie,Elaine A. Ostrander,Joan E. Bailey-Wilson,Predrag Radivojac,Stephen N. Thibodeau,Alice S. Whittemore,Weiva Sieh,Weiva Sieh +45 more
TL;DR: This work developed REVEL (rare exome variant ensemble learner), an ensemble method for predicting the pathogenicity of missense variants on the basis of individual tools: MutPred, FATHMM, VEST, PolyPhen, SIFT, PROVEAN, MutationAssessor, LRT, GERP, SiPhy, phyloP, and phastCons.
Journal ArticleDOI
RAD51B in Familial Breast Cancer
Liisa M. Pelttari,Sofia Khan,Mikko Vuorela,Johanna I. Kiiski,Sara Vilske,Viivi Nevanlinna,Salla Ranta,Johanna Schleutker,Johanna Schleutker,Johanna Schleutker,Robert Winqvist,Anne Kallioniemi,Thilo Dörk,Natalia Bogdanova,Jonine Figueroa,Paul D.P. Pharoah,Marjanka K. Schmidt,Alison M. Dunning,Montserrat Garcia-Closas,Manjeet K. Bolla,Joe Dennis,Kyriaki Michailidou,Qin Wang,John L. Hopper,Melissa C. Southey,Efraim H. Rosenberg,Peter A. Fasching,Peter A. Fasching,Matthias W. Beckmann,Julian Peto,Isabel dos-Santos-Silva,Elinor J. Sawyer,Ian Tomlinson,Barbara Burwinkel,Barbara Burwinkel,Harald Surowy,Harald Surowy,Pascal Guénel,Thérèse Truong,Stig E. Bojesen,Stig E. Bojesen,Børge G. Nordestgaard,Børge G. Nordestgaard,Javier Benitez,Anna González-Neira,Susan L. Neuhausen,Hoda Anton-Culver,Hermann Brenner,Volker Arndt,Alfons Meindl,Rita K. Schmutzler,Hiltrud Brauch,Hiltrud Brauch,Hiltrud Brauch,Thomas Brüning,Annika Lindblom,Sara Margolin,Arto Mannermaa,Jaana M. Hartikainen,Georgia Chenevix-Trench,kConFab,kConFab,Aocs Investigators,Laurien Van Dyck,Hilde Janssen,Hilde Janssen,Jenny Chang-Claude,Anja Rudolph,Paolo Radice,Paolo Peterlongo,Emily Hallberg,Janet E. Olson,Janet E. Olson,Graham G. Giles,Graham G. Giles,Roger L. Milne,Christopher A. Haiman,Fredrick Schumacher,Jacques Simard,Martine Dumont,Martine Dumont,Vessela N. Kristensen,Vessela N. Kristensen,Anne Lise Børresen-Dale,Wei Zheng,Alicia Beeghly-Fadiel,Mervi Grip,Mervi Grip,Irene L. Andrulis,Gord Glendon,Peter Devilee,Caroline Seynaeve,Maartje J. Hooning,Margriet Collée,Angela Cox,Simon S. Cross,Mitul Shah,Robert Luben,Ute Hamann,Ute Hamann,Diana Torres,Anna Jakubowska,Jan Lubinski,Fergus J. Couch,Drakoulis Yannoukakos,Nick Orr,Anthony J. Swerdlow,Hatef Darabi,Jingmei Li,Kamila Czene,Per Hall,Douglas F. Easton,Johanna Mattson,Carl Blomqvist,Kristiina Aittomäki,Heli Nevanlinna +115 more
TL;DR: It is suggested that loss-of-function mutations in RAD 51B are rare, but common variation at the RAD51B region is significantly associated with familial breast cancer risk.
Journal ArticleDOI
Evidence for a prostate cancer susceptibility locus on the X chromosome.
Jianfeng Xu,Deborah A. Meyers,Diha Freije,Sarah D. Isaacs,Kathy E. Wiley,Deborah Nusskern,Charles M. Ewing,Eric P. Wilkens,Piroska Bujnovszky,G. Steven Bova,Patrick C. Walsh,William B. Isaacs,Johanna Schleutker,Mika P. Matikainen,Teuvo L.J. Tammela,Tapio Visakorpi,Olli Kallioniemi,Rebecca Berry,Daniel J. Schaid,Amy J. French,Shannon K. McDonnell,Jennifer J. Schroeder,Michael L. Blute,Stephen N. Thibodeau,Henrik Grönberg,Monika Emanuelsson,Jan-Erik Damber,Anders Bergh,Björn Anders Jonsson,Jeffrey R. Smith,Joan E. Bailey-Wilson,John D. Carpten,Dietrich A. Stephan,Elizabeth M. Gillanders,Isaac Amundson,Tommi Kainu,Diana Freas-Lutz,Agnes Baffoe-Bonnie,Anne Van Aucken,Raman Sood,Francis S. Collins,Michael J. Brownstein,Jeffrey M. Trent +42 more
TL;DR: Evidence for genetic locus heterogeneity was observed and genetic mapping of the locus represents an important initial step in the identification of an X-linked gene implicated in the aetiology of HPC.
Journal ArticleDOI
Association analyses of more than 140,000 men identify 63 new prostate cancer susceptibility loci
Fredrick R. Schumacher,Ali Amin Al Olama,Sonja I. Berndt,Sara Benlloch,Mahbubl Ahmed,Edward J. Saunders,Tokhir Dadaev,Daniel Leongamornlert,Ezequiel Anokian,Clara Cieza-Borrella,Chee Goh,Mark N. Brook,Xin Sheng,Laura Fachal,Joe Dennis,Jonathan Tyrer,Kenneth Muir,Kenneth Muir,Artitaya Lophatananon,Artitaya Lophatananon,Victoria L. Stevens,Susan M. Gapstur,Brian D. Carter,Catherine M. Tangen,Phyllis J. Goodman,Ian M. Thompson,Jyotsna Batra,Jyotsna Batra,Suzanne K. Chambers,Suzanne K. Chambers,Leire Moya,Leire Moya,Judith A. Clements,Judith A. Clements,Lisa G. Horvath,Wayne D. Tilley,Gail P. Risbridger,Gail P. Risbridger,Henrik Grönberg,Markus Aly,Tobias Nordström,Paul D.P. Pharoah,Nora Pashayan,Johanna Schleutker,Teuvo L.J. Tammela,Csilla Sipeky,Anssi Auvinen,Demetrius Albanes,Stephanie J. Weinstein,Alicja Wolk,Alicja Wolk,Niclas Håkansson,Catharine M L West,Alison M. Dunning,Neil G. Burnet,Lorelei A. Mucci,Edward Giovannucci,Gerald L. Andriole,Olivier Cussenot,Geraldine Cancel-Tassin,Stella Koutros,Laura E. Beane Freeman,Karina Dalsgaard Sørensen,Torben F. Ørntoft,Michael Borre,Lovise Maehle,Eli Marie Grindedal,David E. Neal,David E. Neal,David E. Neal,Jenny L Donovan,Freddie C. Hamdy,Richard M. Martin,Ruth C. Travis,Timothy J. Key,Robert J. Hamilton,Neil E. Fleshner,Antonio Finelli,Sue A. Ingles,Mariana C. Stern,Barry S. Rosenstein,Sarah L. Kerns,Harry Ostrer,Yong-Jie Lu,Hongwei Zhang,Ninghan Feng,Xueying Mao,Xin Guo,Guomin Wang,Zan Sun,Graham G. Giles,Melissa C. Southey,Robert J. MacInnis,Robert J. MacInnis,Liesel M. FitzGerald,Liesel M. FitzGerald,Adam S. Kibel,Bettina F. Drake,Ana Vega,Antonio Gómez-Caamaño,Robert Szulkin,Martin Eklund,Manolis Kogevinas,Javier Llorca,Gemma Castaño-Vinyals,Kathryn L. Penney,Meir J. Stampfer,Jong Y. Park,Thomas A. Sellers,Hui Yi Lin,Janet L. Stanford,Janet L. Stanford,Cezary Cybulski,Dominika Wokołorczyk,Jan Lubinski,Elaine A. Ostrander,Milan S. Geybels,Børge G. Nordestgaard,Sune F. Nielsen,Maren Weischer,Rasmus Bisbjerg,Martin Andreas Røder,Peter Iversen,Hermann Brenner,Katarina Cuk,Bernd Holleczek,Christiane Maier,Manuel Luedeke,Thomas J. Schnoeller,Jeri Kim,Christopher J. Logothetis,Esther M. John,Esther M. John,Manuel R. Teixeira,Manuel R. Teixeira,Paula Paulo,Marta Cardoso,Susan L. Neuhausen,Linda Steele,Yuan Chun Ding,Kim De Ruyck,Gert De Meerleer,Piet Ost,Azad Hassan Abdul Razack,Jasmine Lim,Soo Hwang Teo,Daniel W. Lin,Daniel W. Lin,Lisa F. Newcomb,Lisa F. Newcomb,Davor Lessel,Marija Gamulin,Tomislav Kuliš,Radka Kaneva,Nawaid Usmani,Nawaid Usmani,Sandeep Singhal,Sandeep Singhal,Chavdar Slavov,Vanio Mitev,Matthew Parliament,Matthew Parliament,Frank Claessens,Steven Joniau,Thomas Van den Broeck,Samantha E.T. Larkin,Paul A. Townsend,Claire Aukim-Hastie,Manuela Gago Dominguez,Jose Esteban Castelao,Maria Elena Martinez,Monique J. Roobol,Guido Jenster,Ron H.N. van Schaik,Florence Menegaux,Thérèse Truong,Yves Akoli Koudou,Jianfeng Xu,Kay-Tee Khaw,Lisa A. Cannon-Albright,Lisa A. Cannon-Albright,Hardev Pandha,Agnieszka Michael,Stephen N. Thibodeau,Shannon K. McDonnell,Daniel J. Schaid,Sara Lindström,Constance Turman,Jing Ma,David J. Hunter,Elio Riboli,A. Siddiq,Federico Canzian,Laurence N. Kolonel,Loic Le Marchand,Robert N. Hoover,Mitchell J. Machiela,Zuxi Cui,Peter Kraft,Christopher I. Amos,David V. Conti,Douglas F. Easton,Fredrik Wiklund,Stephen J. Chanock,Brian E. Henderson,Zsofia Kote-Jarai,Christopher A. Haiman,Rosalind A. Eeles +207 more
TL;DR: A large meta-analysis combining genome-wide and custom high-density genotyping array data identifies 63 new susceptibility loci for prostate cancer, enhancing fine-mapping efforts and providing insights into the underlying biology of PrCa1.
Journal ArticleDOI
Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array
Rosalind A. Eeles,Ali Amin Al Olama,Sara Benlloch,Edward J. Saunders,Daniel Leongamornlert,Malgorzata Tymrakiewicz,Maya Ghoussaini,Craig Luccarini,Joe Dennis,S Jugurnauth-Little,Tokhir Dadaev,David E. Neal,David E. Neal,Freddie C. Hamdy,Jenny L Donovan,Kenneth Muir,Kenneth Muir,Graham G. Giles,Graham G. Giles,Gianluca Severi,Gianluca Severi,Fredrik Wiklund,Henrik Grönberg,Christopher A. Haiman,Fredrick R. Schumacher,Brian E. Henderson,Loic Le Marchand,Sara Lindström,Peter Kraft,David J. Hunter,Susan M. Gapstur,Stephen J. Chanock,Sonja I. Berndt,Demetrius Albanes,Gerald L. Andriole,Johanna Schleutker,Maren Weischer,Federico Canzian,Elio Riboli,Timothy J. Key,Ruth C. Travis,Daniele Campa,Sue A. Ingles,Esther M. John,Esther M. John,Richard B. Hayes,Paul D.P. Pharoah,Nora Pashayan,Kay-Tee Khaw,Janet L. Stanford,Janet L. Stanford,Elaine A. Ostrander,Lisa B. Signorello,Stephen N. Thibodeau,D J Schaid,Christiane Maier,Walther Vogel,Adam S. Kibel,Cezary Cybulski,Jan Lubinski,Lisa A. Cannon-Albright,Lisa A. Cannon-Albright,Hermann Brenner,Jong Y. Park,Radka Kaneva,Jyotsna Batra,Amanda B. Spurdle,Judith A. Clements,Manuel R. Teixeira,Manuel R. Teixeira,Ed Dicks,Andy C. H. Lee,Alison M. Dunning,Caroline Baynes,Don M. Conroy,Melanie Maranian,Shahana Ahmed,Koveela Govindasami,Michelle Guy,Rosemary A. Wilkinson,Emma J. Sawyer,Angela Morgan,David P. Dearnaley,Alan Horwich,Robert Huddart,Vincent Khoo,Chris Parker,Nicholas van As,C. R. J. Woodhouse,Alan Thompson,Tim Dudderidge,Chris Ogden,Colin Cooper,Artitaya Lophatananon,Angela Cox,Melissa C. Southey,John L. Hopper,Dallas R. English,Dallas R. English,Markus Aly,Jan Adolfsson,Jiangfeng Xu,Siqun L. Zheng,Meredith Yeager,Rudolf Kaaks,W. Ryan Diver,Mia M. Gaudet,Mariana C. Stern,Roman Corral,Amit Joshi,Ahva Shahabi,Tiina Wahlfors,Teuvo L.J. Tammela,Anssi Auvinen,Jarmo Virtamo,Peter Klarskov,Børge G. Nordestgaard,M. Andreas Røder,Sune F. Nielsen,Stig E. Bojesen,Stig E. Bojesen,Afshan Siddiq,Liesel M. FitzGerald,Suzanne Kolb,Erika M. Kwon,Danielle M. Karyadi,William J. Blot,Wei Zheng,Qiuyin Cai,Shannon K. McDonnell,Antje E. Rinckleb,Bettina F. Drake,Graham A. Colditz,Dominika Wokołorczyk,Robert A. Stephenson,Robert A. Stephenson,Craig C. Teerlink,Heiko Müller,Dietrich Rothenbacher,Thomas A. Sellers,Hui-Yi Lin,C. Slavov,Vanio Mitev,Felicity Lose,Srilakshmi Srinivasan,Sofia Maia,Sofia Maia,Paula Paulo,Paula Paulo,Ethan M. Lange,Kathleen A. Cooney,Antonis C. Antoniou,Daniel Vincent,Francois Bacot,Daniel C. Tessier,Zsofia Kote-Jarai,Douglas F. Easton +156 more
TL;DR: In this paper, a custom Illumina array (iCOGS) was used to genotype 211,155 SNPs in blood DNA from 25,074 prostate cancer cases and 24,272 controls from the international PRACTICAL Consortium.