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Open AccessJournal ArticleDOI

Genetic compensation: A phenomenon in search of mechanisms.

TLDR
This review revisits studies reporting genetic compensation in higher eukaryotes and outlines possible molecular mechanisms, which may include both transcriptional and posttranscriptional processes.
Abstract
Several recent studies in a number of model systems including zebrafish, Arabidopsis, and mouse have revealed phenotypic differences between knockouts (i.e., mutants) and knockdowns (e.g., antisense-treated animals). These differences have been attributed to a number of reasons including off-target effects of the antisense reagents. An alternative explanation was recently proposed based on a zebrafish study reporting that genetic compensation was observed in egfl7 mutant but not knockdown animals. Dosage compensation was first reported in Drosophila in 1932, and genetic compensation in response to a gene knockout was first reported in yeast in 1969. Since then, genetic compensation has been documented many times in a number of model organisms; however, our understanding of the underlying molecular mechanisms remains limited. In this review, we revisit studies reporting genetic compensation in higher eukaryotes and outline possible molecular mechanisms, which may include both transcriptional and posttranscriptional processes.

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Posted ContentDOI

Specific detection and deletion of the Sigma-1 receptor in neurons and glial cells for functional characterization in vivo

TL;DR: A highly specific antibody is identified using S1R knockout mice and an immunohistochemical protocol involving a 1% SDS antigen retrieval step is established, which provides powerful tools to cell-specifically detect, delete and functionally characterize S 1R in vivo.
Journal ArticleDOI

A Genetic Compensation Phenomenon and Global Gene Expression Changes in Sex-miR-2766-3p Knockout Strain of Spodoptera exigua Hübner (Lepidoptera: Noctuidae)

TL;DR: In this article , the authors reported that miRNA knockout in S. exigua was non-lethal, confirming the theory that one miRNA function redundantly with other miRNAs or other pathways.
Posted ContentDOI

Simultaneous Knockouts of the Oxytocin and Vasopressin 1b Receptors in Hippocampal CA2 Impair Social Memory

TL;DR: In this article , the effects of a life-long conditional removal (knockout, KO) of either the oxytocin (Oxtr) and vasopressin 1b (Avpr1b) from the pyramidal neurons of CA2 as well as the resultant changes in synaptic transmission within the different fields of the hippocampus were investigated.
Posted ContentDOI

Cardiac muscle-restricted partial loss of Nos1ap expression has limited impact on electro- and echo-cardiographic features

TL;DR: The role of NOS1AP in regulation of the cardiac electrical cycle is supported by a cis-regulatory mechanistic hypothesis and a functional enhancer variant underlying the GWAS signal that influenced human cardiac Nos1AP expression is reported.
References
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Journal ArticleDOI

Network biology: understanding the cell's functional organization

TL;DR: This work states that rapid advances in network biology indicate that cellular networks are governed by universal laws and offer a new conceptual framework that could potentially revolutionize the view of biology and disease pathologies in the twenty-first century.
Journal ArticleDOI

Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

TL;DR: This Review summarizes the current understanding of the mechanistic aspects of microRNA-induced repression of translation and discusses some of the controversies regarding different modes of micro RNA function.
Journal ArticleDOI

Functional profiling of the Saccharomyces cerevisiae genome.

Guri Giaever, +72 more
- 25 Jul 2002 - 
TL;DR: It is shown that previously known and new genes are necessary for optimal growth under six well-studied conditions: high salt, sorbitol, galactose, pH 8, minimal medium and nystatin treatment, and less than 7% of genes that exhibit a significant increase in messenger RNA expression are also required for optimal Growth in four of the tested conditions.
Journal ArticleDOI

Gene Action in the X -chromosome of the Mouse ( Mus musculus L.)

TL;DR: Ohno and Hauschka1 showed that in female mice one chromosome of mammary carcinoma cells and of normal diploid cells of the ovary, mammary gland and liver was heteropyKnotic and suggested that the so-called sex chromatin was composed of one heteropyknotic X-chromosome.
Journal ArticleDOI

The Transcriptional Landscape of the Mammalian Genome

Piero Carninci, +197 more
- 02 Sep 2005 - 
TL;DR: Detailed polling of transcription start and termination sites and analysis of previously unidentified full-length complementary DNAs derived from the mouse genome provide a comprehensive platform for the comparative analysis of mammalian transcriptional regulation in differentiation and development.
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