Journal ArticleDOI
Phytophthora sojae: root rot pathogen of soybean and model oomycete
TLDR
This review briefly summarizes current information about the pathogenicity, evolution, molecular biology and genomics of P. sojae.Abstract:
SUMMARY
Phytophthora sojae is an oomycete pathogen of soybean, classified in the kingdom Stramenopiles It causes ‘damping off’ of seedlings and root rot of older plants, with an annual cost worldwide of $1–2 billion Owing to its economic importance, this species, along with P infestans, has been developed as a model species for the study of oomycete plant pathogens It is readily transformed with DNA enabling over-expression and silencing of selected genes, genetic maps have been constructed and large expressed sequence tag sequence libraries have been developed A draft genome sequence has recently been completed This review briefly summarizes current information about the pathogenicity, evolution, molecular biology and genomics of P sojae
Taxonomy: Phytophthora sojae (Kaufman & Gerdman): superkingdom Eukaryota; kingdom Stramenopila; phylum Oomycota; class Peronosporomycetidae; order Pythiales; family Pythiaceae; genus Phytophthora
Host range: Soybean is the only economically important host Several species of lupins have also been reported as hosts
Disease symptoms and signs: All parts of the soybean plant are susceptible to infection by P sojae, from germinating seedlings to mature plants In the field, P sojae causes damping off of soybean seedlings and a root and stem rot of established plants Leaves can be infected in the field as a result of rain splash or by deliberate inoculation in the laboratory Damping off can affect germinating seeds or emerged seedlings and is most severe when the spring is very wet and warm (25–30 °C) Established plants can become infected when the soil is wet for extended periods, especially if the soil is poorly drained Both the cortex and the vascular tissue are colonized by P sojae, and the infection can spread rapidly along the vascular tissues in susceptible cultivars
Useful websites: http://pmgnvbivtedu, http://phytophthoravbivtedu, http://wwwjgidoegov/Psojae, http://wwwjgidoegov/Pramorum, http://wwwpfgdorg, http://pamgovbivtedu, http://soyvbivtedu, https://wwwvbivtedu/article/articleview/78, http://plantpathosuedu/faculty/dorrancephpread more
Citations
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Journal ArticleDOI
Phytophthora infestans: the plant (and R gene) destroyer
TL;DR: Phytophthora infestans remains a problem to production agriculture and the plasticity of its genome as revealed in population diversity and in the abundance of putative effectors means that this oomycete remains a formidable foe.
Journal ArticleDOI
The Top 10 oomycete pathogens in molecular plant pathology
Sophien Kamoun,Oliver J. Furzer,Jonathan D. G. Jones,Howard S. Judelson,Gul Shad Ali,Ronaldo J. D. Dalio,S. Roy,Leonardo Schena,Antonios Zambounis,Franck Panabières,David J. Cahill,Michelina Ruocco,Andreia Figueiredo,Xiao-Ren Chen,Jon Hulvey,Remco Stam,Kurt Lamour,Mark Gijzen,Brett M. Tyler,Niklaus J. Grünwald,M. Shahid Mukhtar,Daniel F. A. Tomé,Mahmut Tör,Guido Van den Ackerveken,John M. McDowell,Fouad Daayf,William E. Fry,Hannele Lindqvist-Kreuze,Harold J. G. Meijer,Benjamin Petre,Benjamin Petre,Jean B. Ristaino,Kentaro Yoshida,Paul R. J. Birch,Francine Govers +34 more
TL;DR: A survey to query the community for their ranking of plant-pathogenic oomycete species based on scientific and economic importance received 263 votes from 62 scientists in 15 countries for a total of 33 species and the Top 10 species are provided.
Journal ArticleDOI
A multi-locus phylogeny for Phytophthora utilizing markers derived from complete genome sequences.
TL;DR: A genus-wide phylogeny for 82 Phytophthora species is presented using seven of the most informative loci (approximately 8700 nucleotide sites) and support the division of the genus into 10 well-supported clades.
Journal ArticleDOI
External Lipid PI3P Mediates Entry of Eukaryotic Pathogen Effectors into Plant and Animal Host Cells
Shiv D. Kale,Biao Gu,Biao Gu,Daniel G. S. Capelluto,Daolong Dou,Emily R. Feldman,Amanda Rumore,Felipe D. Arredondo,Regina Hanlon,Isabelle Fudal,Thierry Rouxel,Christopher B. Lawrence,Weixing Shan,Brett M. Tyler +13 more
TL;DR: It is shown that effectors of another pathogen type, fungi, contain functional variants of the RXLR motif, and that the oomycete and fungal RX LR motifs enable binding to the phospholipid, phosphatidylinositol-3-phosphate (PI3P).
Journal ArticleDOI
Transcriptional Programming and Functional Interactions within the Phytophthora sojae RXLR Effector Repertoire
Qunqing Wang,Changzhi Han,Adriana O. Ferreira,Xiaoli Yu,Wenwu Ye,Sucheta Tripathy,Shiv D. Kale,Biao Gu,Biao Gu,Yuting Sheng,Yangyang Sui,Xiaoli Wang,Zhengguang Zhang,Baoping Cheng,Suomeng Dong,Weixing Shan,Xiaobo Zheng,Xiaobo Zheng,Daolong Dou,Daolong Dou,Daolong Dou,Brett M. Tyler,Yuanchao Wang,Yuanchao Wang +23 more
TL;DR: A broad functional survey of a large sample of candidate RXLR effectors in the oomycete pathogen of soybean found the most strongly expressed immediate-early effectors could suppress the cell death triggered by several early effectors, and most early effectORS could suppress INF1-triggered cell death, suggesting the two classes of effectors may target different functional branches of the defense response.
References
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Phytophthora Genome Sequences Uncover Evolutionary Origins and Mechanisms of Pathogenesis
Brett M. Tyler,Sucheta Tripathy,Xuemin Zhang,Paramvir S. Dehal,Paramvir S. Dehal,Rays H. Y. Jiang,Rays H. Y. Jiang,Andrea Aerts,Andrea Aerts,Felipe D. Arredondo,Laura Baxter,Douda Bensasson,Douda Bensasson,Douda Bensasson,Jim Beynon,Jarrod Chapman,Jarrod Chapman,Jarrod Chapman,C. M. B. Damasceno,Anne E. Dorrance,Daolong Dou,Allan W. Dickerman,Inna Dubchak,Inna Dubchak,Matteo Garbelotto,Mark Gijzen,Stuart G. Gordon,Francine Govers,Niklaus J. Grünwald,Wayne Huang,Wayne Huang,Kelly Ivors,Kelly Ivors,Richard W. Jones,Sophien Kamoun,Konstantinos Krampis,Kurt Lamour,Mi-Kyung Lee,W. Hayes McDonald,MoÌnica Medina,Harold J. G. Meijer,Eric K. Nordberg,Donald J. Maclean,Manuel D. Ospina-Giraldo,Paul Morris,Vipaporn Phuntumart,Nicholas H. Putnam,Nicholas H. Putnam,Sam Rash,Sam Rash,Jocelyn K. C. Rose,Yasuko Sakihama,Asaf Salamov,Asaf Salamov,Alon Savidor,Chantel F. Scheuring,Brian M. Smith,Bruno W. S. Sobral,Astrid Terry,Astrid Terry,Trudy Torto-Alalibo,Joe Win,Zhanyou Xu,Hong-Bin Zhang,Igor V. Grigoriev,Igor V. Grigoriev,Daniel S. Rokhsar,Daniel S. Rokhsar,Jeffrey L. Boore +68 more
TL;DR: Comparison of the two species' genomes reveals a rapid expansion and diversification of many protein families associated with plant infection such as hydrolases, ABC transporters, protein toxins, proteinase inhibitors, and, in particular, a superfamily of 700 proteins with similarity to known oömycete avirulence genes.
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Targeting induced local lesions IN genomes (TILLING) for plant functional genomics.
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Targeting Malaria Virulence and Remodeling Proteins to the Host Erythrocyte
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Journal ArticleDOI
A host-targeting signal in virulence proteins reveals a secretome in malarial infection.
N. Luisa Hiller,Souvik Bhattacharjee,Christiaan van Ooij,Konstantinos Liolios,Travis Harrison,Carlos López-Estraño,Kasturi Haldar +6 more
TL;DR: Functional studies indicated the predictive value of the signal and its role in targeting virulence proteins to the erythrocyte and implicated its recognition by a receptor/transporter, and bioinformatics predicted a secretome of >320 proteins and conservation of the signals across parasite species.
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