D
Daniel F. R. Cleary
Researcher at University of Aveiro
Publications - 151
Citations - 4764
Daniel F. R. Cleary is an academic researcher from University of Aveiro. The author has contributed to research in topics: Species richness & Coral reef. The author has an hindex of 39, co-authored 141 publications receiving 4100 citations. Previous affiliations of Daniel F. R. Cleary include University of Amsterdam & National Penghu University of Science and Technology.
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Journal ArticleDOI
Denaturing gradient gel electrophoresis and barcoded pyrosequencing reveal unprecedented archaeal diversity in mangrove sediment and rhizosphere samples.
Ana C. C. Pires,Daniel F. R. Cleary,Adelaide Almeida,Ângela Cunha,Simone Dealtry,Leda C. Mendonça-Hagler,Kornelia Smalla,Newton C. M. Gomes +7 more
TL;DR: This study shows that rhizosphere microhabitats of R. mangle and L. racemosa, common plants in subtropical mangroves located in Rio de Janeiro, Brazil, hosted distinct archaeal assemblages, suggesting that roots of both mangrove species influence the sediment Archaeal community.
Journal ArticleDOI
The PREDICTS database: a global database of how local terrestrial biodiversity responds to human impacts
Lawrence N. Hudson,Tim Newbold,Tim Newbold,Sara Contu,Samantha L. L. Hill,Samantha L. L. Hill,Igor Lysenko,Adriana De Palma,Adriana De Palma,Helen Phillips,Helen Phillips,Rebecca A. Senior,Dominic J. Bennett,Hollie Booth,Hollie Booth,Argyrios Choimes,Argyrios Choimes,David L P Correia,Julie Day,Susy Echeverría-Londoño,Susy Echeverría-Londoño,Morgan Garon,Michelle L K Harrison,Daniel J. Ingram,Martin Jung,Victoria Kemp,Lucinda Kirkpatrick,Callum D. Martin,Yuan Pan,Hannah J. White,Job Aben,Stefan Abrahamczyk,Gilbert B. Adum,Virginia Aguilar-Barquero,Marcelo A. Aizen,Marc Ancrenaz,Enrique Arbeláez-Cortés,Enrique Arbeláez-Cortés,Inge Armbrecht,Badrul Azhar,Adrián B Azpiroz,Lander Baeten,András Báldi,John E. Banks,Jos Barlow,Jos Barlow,Péter Batáry,Adam J. Bates,Erin M. Bayne,Pedro Beja,Åke Berg,Nicholas J. Berry,Jake E. Bicknell,Jake E. Bicknell,Jochen H. Bihn,Katrin Böhning-Gaese,Teun Boekhout,Céline Boutin,Jérémy Bouyer,Jérémy Bouyer,Francis Q. Brearley,Isabel Brito,Jörg Brunet,Grzegorz Buczkowski,Erika Buscardo,Erika Buscardo,Jimmy Cabra-García,María Calviño-Cancela,Sydney A. Cameron,Eliana M. Cancello,Tiago F. Carrijo,Anelena L Carvalho,Helena Castro,Alejandro A. Castro-Luna,Rolando Cerda,Alexis Cerezo,Matthieu Chauvat,Frank M. Clarke,Daniel F. R. Cleary,Stuart Connop,Biagio D'Aniello,Pedro Giovâni da Silva,Ben Darvill,Jens Dauber,Alain Dejean,Alain Dejean,Tim Diekötter,Tim Diekötter,Yamileth Domínguez-Haydar,Carsten F. Dormann,Bertrand Dumont,Simon G. Dures,Simon G. Dures,Mats Dynesius,Lars Edenius,Zoltán Elek,Martin H. Entling,Nina Farwig,Tom M. Fayle,Tom M. Fayle,Tom M. Fayle,Antonio Felicioli,Annika M. Felton,Gentile Francesco Ficetola,Bruno K. C. Filgueiras,Steven J. Fonte,Lauchlan H. Fraser,Daisuke Fukuda,Dario Furlani,Jörg U. Ganzhorn,Jenni G. Garden,Carla Gheler-Costa,Paolo Giordani,Simonetta Giordano,Marco Silva Gottschalk,Dave Goulson,Aaron D. Gove,Aaron D. Gove,James Grogan,Mick E. Hanley,Thor Hanson,Nor Rasidah Hashim,Joseph E. Hawes,Joseph E. Hawes,Christian Hébert,Alvin J. Helden,John-André Henden,Lionel Hernández,Felix Herzog,Diego Higuera-Diaz,Branko Hilje,Finbarr G. Horgan,Roland Horváth,Kristoffer Hylander,Paola J. Isaacs-Cubides,Masahiro Ishitani,Carmen T Jacobs,Víctor J. Jaramillo,Birgit Jauker,Mats Jonsell,Thomas S. Jung,Vena Kapoor,Vassiliki Kati,Eric Katovai,Michael Kessler,Eva Knop,Annette Kolb,Ádám Kőrösi,Ádám Kőrösi,Thibault Lachat,Victoria Lantschner,Violette Le Féon,Gretchen LeBuhn,Jean-Philippe Légaré,Susan G. Letcher,Nick A. Littlewood,Carlos A. López-Quintero,Mounir Louhaichi,Gábor L. Lövei,Manuel Esteban Lucas-Borja,Víctor H. Luja,Kaoru Maeto,Tibor Magura,Neil Aldrin D. Mallari,Neil Aldrin D. Mallari,Erika Marin-Spiotta,E J P Marshall,Eliana Martínez,Margaret M. Mayfield,Grzegorz Mikusiński,Jeffrey C. Milder,James R. Miller,Carolina L. Morales,Mary N Muchane,Muchai Muchane,Robin Naidoo,Akihiro Nakamura,Shoji Naoe,Guiomar Nates-Parra,Dario A Navarrete Gutierrez,Eike Lena Neuschulz,Norbertas Noreika,Olivia Norfolk,Jorge Ari Noriega,Nicole M. Nöske,Niall O'Dea,William Oduro,Caleb Ofori-Boateng,Caleb Ofori-Boateng,Chris O. Oke,Lynne M. Osgathorpe,Juan Paritsis,Alejandro Parra-H,Alejandro Parra-H,Nicolás Pelegrin,Carlos A. Peres,Anna Persson,Theodora Petanidou,Ben Phalan,T. Keith Philips,Katja Poveda,Eileen F. Power,Steven J. Presley,Vânia Proença,Marino Quaranta,Carolina Quintero,Nicola A Redpath-Downing,J. Leighton Reid,Yana T. Reis,Danilo Bandini Ribeiro,Barbara A. Richardson,Michael J. Richardson,Carolina A. Robles,Jörg Römbke,Luz Piedad Romero-Duque,Loreta Rosselli,Stephen J. Rossiter,T'ai H. Roulston,Laurent Rousseau,Jonathan P. Sadler,Szabolcs Sáfián,Romeo A. Saldaña-Vázquez,Ulrika Samnegård,Christof Schüepp,Oliver Schweiger,Jodi L. Sedlock,Ghazala Shahabuddin,Douglas Sheil,Douglas Sheil,Fernando A. B. Silva,Eleanor M. Slade,Allan H. Smith-Pardo,Allan H. Smith-Pardo,Navjot S. Sodhi,Eduardo Somarriba,Ramón A. Sosa,Jane C. Stout,Matthew J. Struebig,Yik Hei Sung,Caragh G. Threlfall,Rebecca K. Tonietto,Béla Tóthmérész,Teja Tscharntke,Edgar C. Turner,Jason M. Tylianakis,Jason M. Tylianakis,Adam J. Vanbergen,Kiril Vassilev,Hans Verboven,Carlos H. Vergara,Pablo M. Vergara,Jort Verhulst,Tony R. Walker,Tony R. Walker,Yanping Wang,James I. Watling,Konstans Wells,Konstans Wells,Christopher D. Williams,Michael R. Willig,John C. Z. Woinarski,Jan H. D. Wolf,Ben A. Woodcock,Douglas W. Yu,Douglas W. Yu,Andrey S. Zaitsev,Ben Collen,Robert M. Ewers,Georgina M. Mace,Drew W. Purves,Jörn P. W. Scharlemann,Jörn P. W. Scharlemann,Andy Purvis,Andy Purvis +273 more
TL;DR: A new database of more than 1.6 million samples from 78 countries representing over 28,000 species, collated from existing spatial comparisons of local-scale biodiversity exposed to different intensities and types of anthropogenic pressures, from terrestrial sites around the world is described and assessed.
Journal ArticleDOI
The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project
Lawrence N. Hudson,Tim Newbold,Tim Newbold,Sara Contu,Samantha L. L. Hill,Samantha L. L. Hill,Igor Lysenko,Adriana De Palma,Adriana De Palma,Helen Phillips,Helen Phillips,Tamera I Alhusseini,Felicity E Bedford,Dominic J. Bennett,Hollie Booth,Hollie Booth,Victoria J. Burton,Victoria J. Burton,Charlotte W T Chng,Argyrios Choimes,Argyrios Choimes,David L P Correia,Julie Day,Susy Echeverría-Londoño,Susy Echeverría-Londoño,Susan R Emerson,Di Gao,Morgan Garon,Michelle L K Harrison,Daniel J. Ingram,Martin Jung,Victoria Kemp,Lucinda Kirkpatrick,Callum D. Martin,Yuan Pan,Gwilym D Pask-Hale,Edwin L. Pynegar,Alexandra N Robinson,Katia Sanchez-Ortiz,Rebecca A. Senior,Benno I. Simmons,Hannah J. White,Hanbin Zhang,Job Aben,Job Aben,Stefan Abrahamczyk,Gilbert B. Adum,Virginia Aguilar-Barquero,Marcelo A. Aizen,Belén Albertos,E L Alcala,Maria del Mar Alguacil,Audrey Alignier,Marc Ancrenaz,Alan N. Andersen,Enrique Arbeláez-Cortés,Inge Armbrecht,Víctor Arroyo-Rodríguez,Tom Aumann,Jan C. Axmacher,Badrul Azhar,Adrián B Azpiroz,Lander Baeten,Adama Bakayoko,András Báldi,John E. Banks,SK Baral,Jos Barlow,Jos Barlow,Barbara I. P. Barratt,Lurdes Barrico,Paola Bartolommei,Diane M. Barton,Yves Basset,Péter Batáry,Adam J. Bates,Adam J. Bates,Bruno Baur,Erin M. Bayne,Pedro Beja,Suzan Benedick,Åke Berg,Henry Bernard,Nicholas J. Berry,Dinesh Bhatt,Jake E. Bicknell,Jake E. Bicknell,Jochen H. Bihn,Robin J. Blake,Kadiri Serge Bobo,Roberto Bóçon,Teun Boekhout,Katrin Böhning-Gaese,Kevin J. Bonham,Paulo A. V. Borges,Sérgio Henrique Borges,Céline Boutin,Jérémy Bouyer,Jérémy Bouyer,Cibele Bragagnolo,Jodi S. Brandt,Francis Q. Brearley,Isabel Brito,Vicenç Bros,Jörg Brunet,Grzegorz Buczkowski,Christopher M. Buddle,Rob Bugter,Erika Buscardo,Erika Buscardo,Erika Buscardo,Jörn Buse,Jimmy Cabra-García,Nilton C. Cáceres,Nicolette L. Cagle,María Calviño-Cancela,Sydney A. Cameron,Eliana M. Cancello,Rut Caparrós,Rut Caparrós,Pedro Cardoso,Pedro Cardoso,Daniel Carpenter,Tiago F. Carrijo,Anelena L Carvalho,Camila Righetto Cassano,Helena Castro,Alejandro A. Castro-Luna,Cerda B. Rolando,Alexis Cerezo,Kim Alan Chapman,Matthieu Chauvat,Morten Christensen,Francis M Clarke,Daniel F. R. Cleary,Giorgio Colombo,Stuart Connop,Michael D. Craig,Michael D. Craig,Leopoldo Cruz-López,Saul A. Cunningham,Biagio D'Aniello,Neil D'Cruze,Pedro Giovâni da Silva,Martin Dallimer,Emmanuel Danquah,Ben Darvill,Jens Dauber,Adrian L. V. Davis,Jeff Dawson,Claudio de Sassi,Benoit de Thoisy,Olivier Deheuvels,Alain Dejean,Alain Dejean,Alain Dejean,Jean Louis Devineau,Tim Diekötter,Tim Diekötter,Tim Diekötter,Jignasu V Dolia,Jignasu V Dolia,Erwin Domínguez,Yamileth Domínguez-Haydar,Silvia Dorn,Isabel Draper,Niels Dreber,Niels Dreber,Bertrand Dumont,Simon G. Dures,Simon G. Dures,Mats Dynesius,Lars Edenius,Paul Eggleton,Felix Eigenbrod,Zoltán Elek,Zoltán Elek,Martin H. Entling,Karen J. Esler,Ricardo Franco de Lima,Aisyah Faruk,Nina Farwig,Tom M. Fayle,Tom M. Fayle,Tom M. Fayle,Antonio Felicioli,Annika M. Felton,Roderick J. Fensham,Ignacio C. Fernández,Catarina Ferreira,Gentile Francesco Ficetola,Cristina Fiera,Bruno K. C. Filgueiras,Hüseyin K Fırıncıoğlu,David J. Flaspohler,Andreas Floren,Steven J. Fonte,Steven J. Fonte,Anne Fournier,Robert E. Fowler,Markus Franzén,Lauchlan H. Fraser,Gabriella Fredriksson,Geraldo Freire,Tiago L. M. Frizzo,Daisuke Fukuda,Dario Furlani,René Gaigher,Jörg U. Ganzhorn,Karla P. García,Juan C. Garcia-R,Jenni G. Garden,Jenni G. Garden,Ricardo Garilleti,Bao-Ming Ge,Benoit Gendreau-Berthiaume,Philippa J. Gerard,Carla Gheler-Costa,Benjamin Gilbert,Paolo Giordani,Simonetta Giordano,Carly Golodets,Laurens G L Gomes,Rachelle K. Gould,Dave Goulson,Aaron D. Gove,Aaron D. Gove,Laurent Granjon,Ingo Grass,Ingo Grass,Claudia L. Gray,Claudia L. Gray,James Grogan,Weibin Gu,Moisès Guardiola,Nihara Gunawardene,Alvaro G. Gutiérrez,Doris L. Gutiérrez-Lamus,Daniela H. Haarmeyer,Mick E. Hanley,Thor Hanson,Nor Rasidah Hashim,Shombe N. Hassan,Richard G. Hatfield,Joseph E. Hawes,Matt W. Hayward,Matt W. Hayward,Matt W. Hayward,Christian Hébert,Alvin J. Helden,John-André Henden,Philipp Henschel,Lionel Hernández,James P. Herrera,Farina Herrmann,Felix Herzog,Diego Higuera-Diaz,Branko Hilje,Hubert Höfer,Anke Hoffmann,Finbarr G. Horgan,Finbarr G. Horgan,Elisabeth Hornung,Roland Horváth,Kristoffer Hylander,Paola J. Isaacs-Cubides,Hiroaki Ishida,Masahiro Ishitani,Carmen T Jacobs,Víctor J. Jaramillo,Birgit Jauker,F Jiménez Hernández,McKenzie F. Johnson,Virat Jolli,Mats Jonsell,S. Nur Juliani,Thomas S. Jung,Vena Kapoor,Heike Kappes,Vassiliki Kati,Eric Katovai,Klaus Kellner,Michael Kessler,Kathryn R. Kirby,Andrew M. Kittle,Mairi E. Knight,Eva Knop,Florian Kohler,Matti Koivula,Annette Kolb,Mouhamadou Kone,Ádám Kőrösi,Ádám Kőrösi,Jochen Krauss,Ajith Kumar,Raman Kumar,David J. Kurz,Alex S. Kutt,Thibault Lachat,Thibault Lachat,Victoria Lantschner,Francisco Lara,Jesse R. Lasky,Steven C. Latta,William F. Laurance,Patrick Lavelle,Violette Le Féon,Gretchen LeBuhn,Jean Philippe Légaré,Valérie Lehouck,María Vanessa Lencinas,Pia E. Lentini,Susan G. Letcher,Qi Li,Simon A Litchwark,Nick A. Littlewood,Yunhui Liu,Nancy F. Lo-Man-Hung,Carlos A. López-Quintero,Mounir Louhaichi,Mounir Louhaichi,Gábor L. Lövei,Manuel Esteban Lucas-Borja,Víctor H. Luja,Matthew Scott Luskin,Kaoru Maeto,Tibor Magura,Neil Aldrin D. Mallari,Louise A. Malone,Patrick K Malonza,Jagoba Malumbres-Olarte,Salvador Mandujano,Inger Elisabeth Måren,Erika Marin-Spiotta,Charles J. Marsh,E J P Marshall,Eliana Martínez,Guillermo Martínez Pastur,David Moreno Mateos,Margaret M. Mayfield,Vicente Mazimpaka,Jennifer L. McCarthy,Kyle P. McCarthy,Quinn S. McFrederick,Sean McNamara,Nagore G. Medina,Nagore G. Medina,Rafael Medina,Jose L Mena,Estefanía Micó,Grzegorz Mikusiński,Jeffrey C. Milder,Jeffrey C. Milder,James R. Miller,Daniel Rafael Miranda-Esquivel,Melinda L. Moir,Melinda L. Moir,Carolina L. Morales,Mary N Muchane,Muchai Muchane,Sonja Mudri-Stojnic,A. Nur Munira,Antonio Muoñz-Alonso,B F Munyekenye,Robin Naidoo,A Naithani,Michiko Nakagawa,Akihiro Nakamura,Akihiro Nakamura,Yoshihiro Nakashima,Shoji Naoe,Guiomar Nates-Parra,Dario A Navarrete Gutierrez,Luis Navarro-Iriarte,Paul K. Ndang'ang'a,Eike Lena Neuschulz,Jacqueline T. Ngai,Violaine Nicolas,Sven G. Nilsson,Norbertas Noreika,Olivia Norfolk,Jorge Ari Noriega,David A. Norton,Nicole M. Nöske,A. Justin Nowakowski,Catherine Numa,Niall O'Dea,Patrick J. O’Farrell,Patrick J. O’Farrell,William Oduro,Sabine Oertli,Caleb Ofori-Boateng,Caleb Ofori-Boateng,Christopher Omamoke Oke,Vicencio Oostra,Lynne M. Osgathorpe,Samuel Eduardo Otavo,Navendu V. Page,Juan Paritsis,Alejandro Parra-H,Luke Parry,Guy Pe'er,Peter B. Pearman,Peter B. Pearman,Nicolás Pelegrin,Raphaël Pélissier,Carlos A. Peres,Pablo Luis Peri,Anna Persson,Theodora Petanidou,Marcell K. Peters,Rohan S Pethiyagoda,Ben Phalan,T. Keith Philips,Finn C. Pillsbury,Jimmy Pincheira-Ulbrich,Jimmy Pincheira-Ulbrich,Eduardo Pineda,Joan Pino,Jaime Pizarro-Araya,Andrew J. Plumptre,Santiago L. Poggio,Natalia Politi,Pere Pons,Katja Poveda,Eileen F. Power,Steven J. Presley,Vânia Proença,Marino Quaranta,Carolina Quintero,Romina Rader,B.R. Ramesh,Martha Patricia Ramírez-Pinilla,Jai Ranganathan,Claus Rasmussen,Nicola A Redpath-Downing,J. Leighton Reid,Yana T. Reis,José María Rey Benayas,Juan Carlos Rey-Velasco,Chevonne Reynolds,Chevonne Reynolds,Danilo Bandini Ribeiro,Miriam H. Richards,Barbara A. Richardson,Michael J. Richardson,Rodrigo Macip Ríos,Richard M. Robinson,Carolina A. Robles,Jörg Römbke,Luz Piedad Romero-Duque,Matthias Rös,Loreta Rosselli,Stephen J. Rossiter,Dana S Roth,T'ai H. Roulston,Laurent Rousseau,André V. Rubio,Jean-Claude Ruel,Jonathan P. Sadler,Szabolcs Sáfián,Romeo A. Saldaña-Vázquez,Katerina Sam,Katerina Sam,Katerina Sam,Ulrika Samnegård,Ulrika Samnegård,Joana Santana,Xavier Santos,Jade Savage,Nancy A. Schellhorn,Menno Schilthuizen,Ute Schmiedel,Christine B. Schmitt,Christine B. Schmitt,N.L. Schon,Christof Schüepp,Katharina Schumann,Oliver Schweiger,Dawn M. Scott,Kenneth A. Scott,Jodi L. Sedlock,Steven S. Seefeldt,Ghazala Shahabuddin,Graeme Shannon,Graeme Shannon,Douglas Sheil,Frederick H. Sheldon,Eyal Shochat,Stefan J. Siebert,Fernando A. B. Silva,Javier A. Simonetti,Eleanor M. Slade,Jo Smith,Allan H. Smith-Pardo,Allan H. Smith-Pardo,Navjot S. Sodhi,Eduardo Somarriba,Ramón A. Sosa,Grimaldo Soto Quiroga,Martin-Hugues St-Laurent,Brian M. Starzomski,Constantí Stefanescu,Ingolf Steffan-Dewenter,Philip C. Stouffer,Philip C. Stouffer,Jane C. Stout,Ayron M. Strauch,Matthew J. Struebig,Zhimin Su,Marcela Suarez-Rubio,Shinji Sugiura,Keith S. Summerville,Yik Hei Sung,Hari Sutrisno,Jens-Christian Svenning,Tiit Teder,Caragh G. Threlfall,Anu Tiitsaar,Jacqui H. Todd,Rebecca K. Tonietto,Ignasi Torre,Béla Tóthmérész,Teja Tscharntke,Edgar C. Turner,Jason M. Tylianakis,Jason M. Tylianakis,Marcio Uehara-Prado,J. Nicolás Urbina-Cardona,Denis Vallan,Adam J. Vanbergen,Heraldo L. Vasconcelos,Kiril Vassilev,Hans Verboven,Maria João Verdasca,José R. Verdú,Carlos H. Vergara,Pablo M. Vergara,Jort Verhulst,Massimiliano Virgilio,Lien Van Vu,Edward M Waite,Tony R. Walker,Tony R. Walker,Hua-Feng Wang,Yanping Wang,James I. Watling,Britta Weller,Konstans Wells,Catrin Westphal,Edward D. Wiafe,Christopher D. Williams,Michael R. Willig,John C. Z. Woinarski,Jan H. D. Wolf,Volkmar Wolters,Ben A. Woodcock,Jihua Wu,Joseph M. Wunderle,Yuichi Yamaura,Satoko Yoshikura,Douglas W. Yu,Douglas W. Yu,Andrey S. Zaitsev,Juliane Zeidler,Fasheng Zou,Ben Collen,Robert M. Ewers,Georgina M. Mace,Drew W. Purves,Jörn P. W. Scharlemann,Jörn P. W. Scharlemann,Andy Purvis,Andy Purvis +573 more
TL;DR: The PREDICTS project as discussed by the authors provides a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use.
Journal ArticleDOI
Taking Root: Enduring Effect of Rhizosphere Bacterial Colonization in Mangroves
Newton C. M. Gomes,Daniel F. R. Cleary,Fernando Neves Pinto,Conceição Egas,Adelaide Almeida,Angela Cunha,Leda C. Mendonça-Hagler,Kornelia Smalla +7 more
TL;DR: It is found that mangrove roots appear to influence bacterial abundance and composition in the rhizosphere, and this study indicates that nursery conditions and early microbial colonization patterns of the replants are key factors that should be considered during reforestation projects.
Journal ArticleDOI
An examination of scale of assessment, logging and ENSO-induced fires on butterfly diversity in Borneo
TL;DR: The lower levels of species richness in ENSO-affected areas and at the larger landscape spatial scale indicate that future severe E NSO events may prove one of the most serious threats to extant biodiversity.