Institution
University of Lorraine
Education•Nancy, France•
About: University of Lorraine is a education organization based out in Nancy, France. It is known for research contribution in the topics: Population & Context (language use). The organization has 11942 authors who have published 25010 publications receiving 425227 citations. The organization is also known as: Lorraine University.
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TL;DR: This work determines the contents of coumarin and furanocoumarin within the peel and the pulp of 61 Citrus species representative of the genetic diversity all Citrus, and proposes to select mandarins and Ichang papeda as Citrus varieties for use in creating species devoid of these toxic compounds in future breeding programs.
Abstract: Citrus plants are able to produce defense compounds such as coumarins and furanocoumarins to cope with herbivorous insects and pathogens. In humans, these chemical compounds are strong photosensitizers and can interact with medications, leading to the “grapefruit juice effect”. Removing coumarins and furanocoumarins from food and cosmetics imply additional costs and might alter product quality. Thus, the selection of Citrus cultivars displaying low coumarin and furanocoumarin contents constitutes a valuable alternative. In this study, we performed ultra-performance liquid chromatography coupled with mass spectrometry analyses to determine the contents of these compounds within the peel and the pulp of 61 Citrus species representative of the genetic diversity all Citrus. Generally, Citrus peel contains larger diversity and higher concentrations of coumarin/furanocoumarin than the pulp of the same fruits. According to the chemotypes found in the peel, Citrus species can be separated into 4 groups that correspond to the 4 ancestral taxa (pummelos, mandarins, citrons and papedas) and extended with their respective secondary species descendants. Three of the 4 ancestral taxa (pummelos, citrons and papedas) synthesize high amounts of these compounds, whereas mandarins appear practically devoid of them. Additionally, all ancestral taxa and their hybrids are logically organized according to the coumarin and furanocoumarin pathways described in the literature. This organization allows hypotheses to be drawn regarding the biosynthetic origin of compounds for which the biogenesis remains unresolved. Determining coumarin and furanocoumarin contents is also helpful for hypothesizing the origin of Citrus species for which the phylogeny is presently not firmly established. Finally, this work also notes favorable hybridization schemes that will lead to low coumarin and furanocoumarin contents, and we propose to select mandarins and Ichang papeda as Citrus varieties for use in creating species devoid of these toxic compounds in future breeding programs.
89 citations
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university of lille1, European Bioinformatics Institute2, Francis Crick Institute3, University of Paris4, Institut Universitaire de France5, University of Grenoble6, Jiangsu University7, Weizmann Institute of Science8, University of Gdańsk9, Polish Academy of Sciences10, Korea Institute for Advanced Study11, University of California, Davis12, ETH Zurich13, Moscow Institute of Physics and Technology14, Huazhong University of Science and Technology15, Barcelona Supercomputing Center16, Spanish National Research Council17, Purdue University18, Stony Brook University19, Boston University20, University of Lorraine21, King Abdullah University of Science and Technology22, University of Naples Federico II23, Texas A&M University24, Seoul National University25, Hebrew University of Jerusalem26, Vilnius University27, University of Kansas28, University of Massachusetts Medical School29, University of Maryland, College Park30, University of Missouri31, Utrecht University32
TL;DR: CAPRI Round 46 indicates that residues in binding interfaces were less well predicted in this set of targets than in previous Rounds, providing useful insights for directions of future improvements.
Abstract: We present the results for CAPRI Round 46, the third joint CASP‐CAPRI protein assembly prediction challenge. The Round comprised a total of 20 targets including 14 homo‐oligomers and 6 heterocomplexes. Eight of the homo‐oligomer targets and one heterodimer comprised proteins that could be readily modeled using templates from the Protein Data Bank, often available for the full assembly. The remaining 11 targets comprised 5 homodimers, 3 heterodimers, and two higher‐order assemblies. These were more difficult to model, as their prediction mainly involved “ab‐initio” docking of subunit models derived from distantly related templates. A total of ~30 CAPRI groups, including 9 automatic servers, submitted on average ~2000 models per target. About 17 groups participated in the CAPRI scoring rounds, offered for most targets, submitting ~170 models per target. The prediction performance, measured by the fraction of models of acceptable quality or higher submitted across all predictors groups, was very good to excellent for the nine easy targets. Poorer performance was achieved by predictors for the 11 difficult targets, with medium and high quality models submitted for only 3 of these targets. A similar performance “gap” was displayed by scorer groups, highlighting yet again the unmet challenge of modeling the conformational changes of the protein components that occur upon binding or that must be accounted for in template‐based modeling. Our analysis also indicates that residues in binding interfaces were less well predicted in this set of targets than in previous Rounds, providing useful insights for directions of future improvements.
89 citations
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01 Jan 2017
TL;DR: The work at NUIG was supported by the Irish Research Council under Grant number EPSPG/2012/380 as discussed by the authors, and the collaboration between LRGP and NIIG is supported by COST Action 1404.
Abstract: The work at NUIG was supported by the Irish Research Council under Grant number EPSPG/2012/380. The collaboration between LRGP and NUIG was supported by COST Action 1404. The work at CNRS Orleans was supported by the ERC Advanced Researcher Grant no. 291049-2G-CSafe.
89 citations
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TL;DR: It is found that phase transformations often occur in the material prior to the stabilisation of its final structure, and this results open the way to a better prediction and control of the structure of mesoporous materials.
Abstract: In this review, recent progress in the understanding of the formation of various silica mesoporous materials is reported. Owing to time-resolved experiments using Small Angle X-ray or Neutron Scattering (SAXS or SANS), it is possible to follow in situ the formation of a material during its synthesis via the Cooperative Templating Mechanism (CTM). Such experiments directly provide unique information about the structural properties of the material inside the synthesis solution. One of the main findings is that phase transformations often occur in the material prior to the stabilisation of its final structure. Moreover, during the very early stages of the synthesis, it is also possible to detect the first hybrid silica–surfactant micellar aggregates, prior to the precipitation of the material, as reported in the case of the SBA-15 materials. All these experiments allow a better understanding of the formation mechanisms and of the influence of the many synthesis parameters. These results open the way to a better prediction and control of the structure of mesoporous materials.
89 citations
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TL;DR: In this article, 1% and 2% sodium alginate (NaAlg) with and without grapefruit seed extract (GSE) or grapefruit essential oil (GEO) were applied to table grapes to preserve their quality.
Abstract: Summary
Biodegradable coatings based on 1% and 2% sodium alginate (NaAlg) with and without grapefruit seed extract (GSE) or grapefruit essential oil (GEO) were applied to table grapes to preserve their quality. Changes in weight loss, firmness and antioxidant activity were assessed over 15 days of cold storage. The effectiveness of developed coatings to control postharvest decay of inoculated grape berries stored for 5 days at 20 °C was also investigated. Biodegradable coatings based on pure NaAlg and those containing GSE were efficient in reducing weight loss and maintaining firmness during storage. Coatings incorporating either GEO or GSE were able to preserve the antioxidant activity of treated grapes and to reduce decay incidence in inoculated fruits. Coatings formulated with 2% NaAlg-1% GSE showed the greatest preservation of antioxidant activity and the highest antifungal effect, with an effective control of water and firmness losses. These coatings can be recommended for maintaining table grapes quality.
88 citations
Authors
Showing all 12161 results
Name | H-index | Papers | Citations |
---|---|---|---|
Jonathan I. Epstein | 138 | 1121 | 80975 |
Peter Tugwell | 129 | 948 | 125480 |
David Brown | 105 | 1257 | 46827 |
Faiez Zannad | 103 | 839 | 90737 |
Sabu Thomas | 102 | 1554 | 51366 |
Francis Martin | 98 | 733 | 43991 |
João F. Mano | 97 | 822 | 36401 |
Jonathan A. Epstein | 94 | 299 | 27492 |
Muhammad Imran | 94 | 3053 | 51728 |
Laurent Peyrin-Biroulet | 90 | 901 | 34120 |
Athanase Benetos | 83 | 391 | 31718 |
Michel Marre | 82 | 444 | 39052 |
Bruno Rossion | 80 | 337 | 21902 |
Lyn March | 78 | 367 | 62536 |
Alan J. M. Baker | 76 | 234 | 26080 |