M
Mark Gerstein
Researcher at Yale University
Publications - 802
Citations - 172183
Mark Gerstein is an academic researcher from Yale University. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 168, co-authored 751 publications receiving 149578 citations. Previous affiliations of Mark Gerstein include Rutgers University & Structural Genomics Consortium.
Papers
More filters
Journal ArticleDOI
Fast and Scalable Private Genotype Imputation Using Machine Learning and Partially Homomorphic Encryption
TL;DR: In this article, the Paillier cryptosystem was used for genotype imputation using Machine Learning (ML) and a standardized homomorphic encryption scheme, achieving up to 99% micro area under curve score on real-world large-scale datasets up to 80,000 targets.
Journal ArticleDOI
Corrigendum: Diverse human extracellular RNAs are widely detected in human plasma.
Jane E. Freedman,Mark Gerstein,Eric Mick,Joel Rozowsky,Daniel Levy,Robert R. Kitchen,Saumya Das,Ravi V. Shah,Kirsty Danielson,Lea M. Beaulieu,Fabio C. P. Navarro,Yaoyu E. Wang,Timur R. Galeev,Alex Holman,Raymond Y. Kwong,Venkatesh L. Murthy,Selim E. Tanriverdi,Milka Koupenova,Ekaterina Mikhalev,Kahraman Tanriverdi +19 more
TL;DR: The original version of this article contained an error in the spelling of the author Milka Koupenova as discussed by the authors, which was incorrectly given as Milka Koukpenova-Zamor. This has now been corrected in both the PDF and HTML versions of the article.
Posted ContentDOI
A community-driven roadmap to advance research on translated open reading frames detected by Ribo-seq
Jonathan M. Mudge,Jorge Ruiz-Orera,John R. Prensner,John R. Prensner,John R. Prensner,Brunet,Jose Manuel Gonzalez,Michele Magrane,Thomas F. Martinez,Jana Felicitas Schulz,Yuchen Yang,M. Mar Albà,M. Mar Albà,Pavel V. Baranov,Ariel A. Bazzini,Ariel A. Bazzini,Elspeth A. Bruford,Elspeth A. Bruford,Maria Jesus Martin,Anne-Ruxandra Carvunis,Jian Chen,Juan Pablo Couso,Paul Flicek,Adam Frankish,Mark Gerstein,Norbert Hubner,Norbert Hubner,Nicholas T. Ingolia,Gerben Menschaert,Uwe Ohler,Uwe Ohler,Xavier Roucou,Alan Saghatelian,Jonathan S. Weissman,S. van Heesch +34 more
TL;DR: In this paper, the authors outline the initial stages of a community-led effort supported by GENCODE/Ensembl, HGNC and UniProt to produce a consolidated catalog of human Ribo-seq ORFs.
Journal ArticleDOI
IQSeq: integrated isoform quantification analysis based on next-generation sequencing.
TL;DR: A statistical solution for isoform quantification in next-generation Sequencing is developed, based on analyzing a set of RNA-Seq reads, and a practical implementation is presented, available from archive.gersteinlab.org/proj/rnaseq/IQSeq.