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Showing papers by "University of Ioannina published in 2017"


Journal ArticleDOI
Albert M. Sirunyan, Armen Tumasyan, Wolfgang Adam1, Ece Aşılar1  +2212 moreInstitutions (157)
TL;DR: A fully-fledged particle-flow reconstruction algorithm tuned to the CMS detector was developed and has been consistently used in physics analyses for the first time at a hadron collider as mentioned in this paper.
Abstract: The CMS apparatus was identified, a few years before the start of the LHC operation at CERN, to feature properties well suited to particle-flow (PF) reconstruction: a highly-segmented tracker, a fine-grained electromagnetic calorimeter, a hermetic hadron calorimeter, a strong magnetic field, and an excellent muon spectrometer. A fully-fledged PF reconstruction algorithm tuned to the CMS detector was therefore developed and has been consistently used in physics analyses for the first time at a hadron collider. For each collision, the comprehensive list of final-state particles identified and reconstructed by the algorithm provides a global event description that leads to unprecedented CMS performance for jet and hadronic τ decay reconstruction, missing transverse momentum determination, and electron and muon identification. This approach also allows particles from pileup interactions to be identified and enables efficient pileup mitigation methods. The data collected by CMS at a centre-of-mass energy of 8\TeV show excellent agreement with the simulation and confirm the superior PF performance at least up to an average of 20 pileup interactions.

719 citations


Journal ArticleDOI
TL;DR: In this paper, the trigger system consists of two levels designed to select events of potential physics interest from a GHz (MHz) interaction rate of proton-proton (heavy ion) collisions.
Abstract: This paper describes the CMS trigger system and its performance during Run 1 of the LHC. The trigger system consists of two levels designed to select events of potential physics interest from a GHz (MHz) interaction rate of proton-proton (heavy ion) collisions. The first level of the trigger is implemented in hardware, and selects events containing detector signals consistent with an electron, photon, muon, tau lepton, jet, or missing transverse energy. A programmable menu of up to 128 object-based algorithms is used to select events for subsequent processing. The trigger thresholds are adjusted to the LHC instantaneous luminosity during data taking in order to restrict the output rate to 100 kHz, the upper limit imposed by the CMS readout electronics. The second level, implemented in software, further refines the purity of the output stream, selecting an average rate of 400 Hz for offline event storage. The objectives, strategy and performance of the trigger system during the LHC Run 1 are described.

532 citations


Journal ArticleDOI
Christopher P. Nelson1, Christopher P. Nelson2, Anuj Goel3, Anuj Goel4, Adam S. Butterworth5, Stavroula Kanoni6, Tom R. Webb1, Tom R. Webb2, Eirini Marouli6, Lingyao Zeng7, Ioanna Ntalla6, Florence Lai1, Florence Lai2, Jemma C. Hopewell4, Olga Giannakopoulou6, Tao Jiang5, Stephen E. Hamby1, Stephen E. Hamby2, Emanuele Di Angelantonio5, Themistocles L. Assimes8, Erwin P. Bottinger9, John C. Chambers10, John C. Chambers11, John C. Chambers12, Robert Clarke4, Colin N. A. Palmer13, Richard M Cubbon14, Patrick T. Ellinor15, Raili Ermel16, Evangelos Evangelou11, Evangelos Evangelou17, Paul W. Franks18, Paul W. Franks19, Paul W. Franks20, Christopher Grace3, Christopher Grace4, Dongfeng Gu21, Aroon D. Hingorani22, Joanna M. M. Howson5, Erik Ingelsson8, Adnan Kastrati7, Thorsten Kessler7, Theodosios Kyriakou4, Theodosios Kyriakou3, Terho Lehtimäki23, Xiangfeng Lu8, Yingchang Lu9, Yingchang Lu24, Winfried März25, Winfried März26, Winfried März27, Ruth McPherson28, Andres Metspalu29, Mar Pujades-Rodriguez14, Arno Ruusalepp16, Eric E. Schadt9, Amand F. Schmidt22, Michael J. Sweeting5, Pierre Zalloua18, Pierre Zalloua30, Kamal Alghalayini31, Bernard Keavney32, Bernard Keavney33, Jaspal S. Kooner34, Jaspal S. Kooner12, Jaspal S. Kooner10, Ruth J. F. Loos9, Riyaz S. Patel35, Martin K. Rutter32, Martin K. Rutter33, Maciej Tomaszewski33, Maciej Tomaszewski36, Ioanna Tzoulaki17, Ioanna Tzoulaki11, Eleftheria Zeggini37, Jeanette Erdmann38, George Dedoussis39, Johan L.M. Björkegren9, Johan L.M. Björkegren40, CARDIoGRAMplusC D4, Heribert Schunkert7, Martin Farrall3, Martin Farrall4, John Danesh5, John Danesh37, Nilesh J. Samani2, Nilesh J. Samani1, Hugh Watkins3, Hugh Watkins4, Panos Deloukas6, Panos Deloukas31 
TL;DR: This approach identified 13 new loci at genome-wide significance, 12 of which were on the previous list of loci meeting the 5% FDR threshold, thus providing strong support that the remaining loci identified by FDR represent genuine signals.
Abstract: Genome-wide association studies (GWAS) in coronary artery disease (CAD) had identified 66 loci at 'genome-wide significance' (P < 5 × 10-8) at the time of this analysis, but a much larger number of putative loci at a false discovery rate (FDR) of 5% (refs. 1,2,3,4). Here we leverage an interim release of UK Biobank (UKBB) data to evaluate the validity of the FDR approach. We tested a CAD phenotype inclusive of angina (SOFT; ncases = 10,801) as well as a stricter definition without angina (HARD; ncases = 6,482) and selected cases with the former phenotype to conduct a meta-analysis using the two most recent CAD GWAS. This approach identified 13 new loci at genome-wide significance, 12 of which were on our previous list of loci meeting the 5% FDR threshold, thus providing strong support that the remaining loci identified by FDR represent genuine signals. The 304 independent variants associated at 5% FDR in this study explain 21.2% of CAD heritability and identify 243 loci that implicate pathways in blood vessel morphogenesis as well as lipid metabolism, nitric oxide signaling and inflammation.

529 citations


Journal ArticleDOI
28 Feb 2017-BMJ
TL;DR: Obesity is becoming one of the biggest problems in public health; evidence on the strength of the associated risks may allow finer selection of those at higher risk of cancer, who could be targeted for personalised prevention strategies.
Abstract: Objective To evaluate the strength and validity of the evidence for the association between adiposity and risk of developing or dying from cancer. Design Umbrella review of systematic reviews and meta-analyses. Data sources PubMed, Embase, Cochrane Database of Systematic Reviews, and manual screening of retrieved references. Eligibility criteria Systematic reviews or meta-analyses of observational studies that evaluated the association between indices of adiposity and risk of developing or dying from cancer. Data synthesis Primary analysis focused on cohort studies exploring associations for continuous measures of adiposity. The evidence was graded into strong, highly suggestive, suggestive, or weak after applying criteria that included the statistical significance of the random effects summary estimate and of the largest study in a meta-analysis, the number of cancer cases, heterogeneity between studies, 95% prediction intervals, small study effects, excess significance bias, and sensitivity analysis with credibility ceilings. Results 204 meta-analyses investigated associations between seven indices of adiposity and developing or dying from 36 primary cancers and their subtypes. Of the 95 meta-analyses that included cohort studies and used a continuous scale to measure adiposity, only 12 (13%) associations for nine cancers were supported by strong evidence. An increase in body mass index was associated with a higher risk of developing oesophageal adenocarcinoma; colon and rectal cancer in men; biliary tract system and pancreatic cancer; endometrial cancer in premenopausal women; kidney cancer; and multiple myeloma. Weight gain and waist to hip circumference ratio were associated with higher risks of postmenopausal breast cancer in women who have never used hormone replacement therapy and endometrial cancer, respectively. The increase in the risk of developing cancer for every 5 kg/m 2 increase in body mass index ranged from 9% (relative risk 1.09, 95% confidence interval 1.06 to 1.13) for rectal cancer among men to 56% (1.56, 1.34 to 1.81) for biliary tract system cancer. The risk of postmenopausal breast cancer among women who have never used HRT increased by 11% for each 5 kg of weight gain in adulthood (1.11, 1.09 to 1.13), and the risk of endometrial cancer increased by 21% for each 0.1 increase in waist to hip ratio (1.21, 1.13 to 1.29). Five additional associations were supported by strong evidence when categorical measures of adiposity were included: weight gain with colorectal cancer; body mass index with gallbladder, gastric cardia, and ovarian cancer; and multiple myeloma mortality. Conclusions Although the association of adiposity with cancer risk has been extensively studied, associations for only 11 cancers (oesophageal adenocarcinoma, multiple myeloma, and cancers of the gastric cardia, colon, rectum, biliary tract system, pancreas, breast, endometrium, ovary, and kidney) were supported by strong evidence. Other associations could be genuine, but substantial uncertainty remains. Obesity is becoming one of the biggest problems in public health; evidence on the strength of the associated risks may allow finer selection of those at higher risk of cancer, who could be targeted for personalised prevention strategies.

525 citations


Journal ArticleDOI
Khachatryan1, Albert M. Sirunyan1, Armen Tumasyan1, Wolfgang Adam  +2285 moreInstitutions (147)
TL;DR: In this paper, an improved jet energy scale corrections, based on a data sample corresponding to an integrated luminosity of 19.7 fb^(-1) collected by the CMS experiment in proton-proton collisions at a center-of-mass energy of 8 TeV, are presented.
Abstract: Improved jet energy scale corrections, based on a data sample corresponding to an integrated luminosity of 19.7 fb^(-1) collected by the CMS experiment in proton-proton collisions at a center-of-mass energy of 8 TeV, are presented. The corrections as a function of pseudorapidity η and transverse momentum p_T are extracted from data and simulated events combining several channels and methods. They account successively for the effects of pileup, uniformity of the detector response, and residual data-simulation jet energy scale differences. Further corrections, depending on the jet flavor and distance parameter (jet size) R, are also presented. The jet energy resolution is measured in data and simulated events and is studied as a function of pileup, jet size, and jet flavor. Typical jet energy resolutions at the central rapidities are 15–20% at 30 GeV, about 10% at 100 GeV, and 5% at 1 TeV. The studies exploit events with dijet topology, as well as photon+jet, Z+jet and multijet events. Several new techniques are used to account for the various sources of jet energy scale corrections, and a full set of uncertainties, and their correlations, are provided. The final uncertainties on the jet energy scale are below 3% across the phase space considered by most analyses (p_T > 30 GeV and 0|η| 30 GeV is reached, when excluding the jet flavor uncertainties, which are provided separately for different jet flavors. A new benchmark for jet energy scale determination at hadron colliders is achieved with 0.32% uncertainty for jets with p_T of the order of 165–330 GeV, and |η| < 0.8.

505 citations


Journal ArticleDOI
TL;DR: In this paper, the authors report genetic association of blood pressure (systolic, diastolic, pulse pressure) among UK Biobank participants of European ancestry with independent replication in other cohorts, and robust validation of 107 independent loci.
Abstract: Elevated blood pressure is the leading heritable risk factor for cardiovascular disease worldwide. We report genetic association of blood pressure (systolic, diastolic, pulse pressure) among UK Biobank participants of European ancestry with independent replication in other cohorts, and robust validation of 107 independent loci. We also identify new independent variants at 11 previously reported blood pressure loci. In combination with results from a range of in silico functional analyses and wet bench experiments, our findings highlight new biological pathways for blood pressure regulation enriched for genes expressed in vascular tissues and identify potential therapeutic targets for hypertension. Results from genetic risk score models raise the possibility of a precision medicine approach through early lifestyle intervention to offset the impact of blood pressure-raising genetic variants on future cardiovascular disease risk.

458 citations


Journal ArticleDOI
TL;DR: The latest scientific information on breast cancer arising in young women is summarized highlighting the heterogeneity and the complex nature of this type of cancer.
Abstract: Despite dramatic advances in cancer research setting, breast cancer remains a major health problem and represents currently a top biomedical research priority. Worldwide, breast cancer is the most common cancer affecting women, and its incidence and mortality rates are expected to increase significantly the next years. Recently the researchers' interest has been attracted by breast cancer arising in young women. Current evidence suggests that in women aged <45 years, breast cancer is unquestionably the leading cause of cancer-related deaths. This type of cancer seems to be highly heterogeneous and has potentially aggressive and complex biological features. However, management strategies, recommendations and options are not age based and the 'complex' biology of this type of cancer remains uncertain and unexplored. In this review, we summarize the latest scientific information on breast cancer arising in young women highlighting the heterogeneity and the complex nature of this type of cancer.

379 citations


Journal ArticleDOI
TL;DR: The key assumption of network meta-analysis is discussed, as well as the unique considerations for developing appropriate research questions, conducting the literature search, abstracting data, performing qualitative and quantitative synthesis, presenting results, drawing conclusions, and reporting the findings in a networkMeta-analysis.
Abstract: Network meta-analysis is a technique for comparing multiple treatments simultaneously in a single analysis by combining direct and indirect evidence within a network of randomized controlled trials. Network meta-analysis may assist assessing the comparative effectiveness of different treatments regularly used in clinical practice and, therefore, has become attractive among clinicians. However, if proper caution is not taken in conducting and interpreting network meta-analysis, inferences might be biased. The aim of this paper is to illustrate the process of network meta-analysis with the aid of a working example on first-line medical treatment for primary open-angle glaucoma. We discuss the key assumption of network meta-analysis, as well as the unique considerations for developing appropriate research questions, conducting the literature search, abstracting data, performing qualitative and quantitative synthesis, presenting results, drawing conclusions, and reporting the findings in a network meta-analysis.

370 citations


Journal ArticleDOI
Ronald P. de Vries1, Robert Riley2, Ad Wiebenga1, Guillermo Aguilar-Osorio3, Sotiris Amillis4, Cristiane Uchima, Gregor Anderluh, Mojtaba Asadollahi5, Marion Askin6, Marion Askin7, Kerrie Barry2, Evy Battaglia1, Özgür Bayram8, Özgür Bayram9, Tiziano Benocci1, Susanna A. Braus-Stromeyer8, Camila Caldana, David Cánovas10, David Cánovas11, Gustavo C. Cerqueira12, Fusheng Chen13, Wanping Chen13, Cindy Choi2, Alicia Clum2, Renato Augusto Corrêa dos Santos, André Damasio14, George Diallinas4, Tamás Emri5, Erzsébet Fekete5, Michel Flipphi5, Susanne Freyberg8, Antonia Gallo15, Christos Gournas16, Rob Habgood17, Matthieu Hainaut18, María Harispe19, Bernard Henrissat18, Bernard Henrissat20, Bernard Henrissat21, Kristiina Hildén22, Ryan Hope17, Abeer Hossain23, Eugenia Karabika24, Eugenia Karabika25, Levente Karaffa5, Zsolt Karányi5, Nada Kraševec, Alan Kuo2, Harald Kusch8, Kurt LaButti2, Ellen Lagendijk7, Alla Lapidus26, Alla Lapidus2, Anthony Levasseur18, Erika Lindquist2, Anna Lipzen2, Antonio F. Logrieco15, Andrew MacCabe27, Miia R. Mäkelä22, Iran Malavazi28, Petter Melin29, Vera Meyer30, Natalia Mielnichuk11, Natalia Mielnichuk31, Márton Miskei5, Ákos Molnár5, Giuseppina Mulè15, Chew Yee Ngan2, Margarita Orejas27, Erzsébet Orosz1, Erzsébet Orosz5, Jean Paul Ouedraogo7, Jean Paul Ouedraogo32, Karin M. Overkamp, Hee-Soo Park33, Giancarlo Perrone15, François Piumi18, François Piumi21, Peter J. Punt7, Arthur F. J. Ram7, Ana Ramón34, Stefan Rauscher35, Eric Record18, Diego Mauricio Riaño-Pachón, Vincent Robert1, Julian Röhrig35, Roberto Ruller, Asaf Salamov2, Nadhira Salih36, Nadhira Salih17, Rob Samson1, Erzsébet Sándor5, Manuel Sanguinetti34, Tabea Schütze30, Tabea Schütze7, Kristina Sepčić37, Ekaterina Shelest38, Gavin Sherlock39, Vicky Sophianopoulou, Fabio M. Squina, Hui Sun2, Antonia Susca15, Richard B. Todd40, Adrian Tsang32, Shiela E. Unkles24, Nathalie van de Wiele1, Diana van Rossen-Uffink7, Juliana Velasco de Castro Oliveira, Tammi Camilla Vesth41, Jaap Visser1, Jae-Hyuk Yu42, Miaomiao Zhou1, Mikael Rørdam Andersen41, David B. Archer17, Scott E. Baker43, Isabelle Benoit32, Isabelle Benoit1, Axel A. Brakhage44, Gerhard H. Braus8, Reinhard Fischer35, Jens Christian Frisvad41, Gustavo H. Goldman45, Jos Houbraken1, Berl R. Oakley46, István Pócsi5, Claudio Scazzocchio47, Claudio Scazzocchio48, Bernhard Seiboth49, Patricia A. vanKuyk1, Patricia A. vanKuyk7, Jennifer R. Wortman12, Paul S. Dyer17, Igor V. Grigoriev2 
Utrecht University1, United States Department of Energy2, National Autonomous University of Mexico3, National and Kapodistrian University of Athens4, University of Debrecen5, Commonwealth Scientific and Industrial Research Organisation6, Leiden University7, University of Göttingen8, Maynooth University9, University of Natural Resources and Life Sciences, Vienna10, University of Seville11, Broad Institute12, Huazhong Agricultural University13, State University of Campinas14, International Sleep Products Association15, Université libre de Bruxelles16, University of Nottingham17, Aix-Marseille University18, Pasteur Institute19, King Abdulaziz University20, Institut national de la recherche agronomique21, University of Helsinki22, University of Amsterdam23, University of St Andrews24, University of Ioannina25, Saint Petersburg State University26, Spanish National Research Council27, Federal University of São Carlos28, Swedish University of Agricultural Sciences29, Technical University of Berlin30, National Scientific and Technical Research Council31, Concordia University32, Kyungpook National University33, University of the Republic34, Karlsruhe Institute of Technology35, University of Sulaymaniyah36, University of Ljubljana37, Leibniz Association38, Stanford University39, Kansas State University40, Technical University of Denmark41, University of Wisconsin-Madison42, Pacific Northwest National Laboratory43, University of Jena44, University of São Paulo45, University of Kansas46, Université Paris-Saclay47, Imperial College London48, Vienna University of Technology49
TL;DR: In this article, a comparative genomics and experimental study of the aspergilli genus is presented, which allows for the first time a genus-wide view of the biological diversity of the Aspergillus and in many, but not all, cases linked genome differences to phenotype.
Abstract: Background: The fungal genus Aspergillus is of critical importance to humankind. Species include those with industrial applications, important pathogens of humans, animals and crops, a source of potent carcinogenic contaminants of food, and an important genetic model. The genome sequences of eight aspergilli have already been explored to investigate aspects of fungal biology, raising questions about evolution and specialization within this genus. Results: We have generated genome sequences for ten novel, highly diverse Aspergillus species and compared these in detail to sister and more distant genera. Comparative studies of key aspects of fungal biology, including primary and secondary metabolism, stress response, biomass degradation, and signal transduction, revealed both conservation and diversity among the species. Observed genomic differences were validated with experimental studies. This revealed several highlights, such as the potential for sex in asexual species, organic acid production genes being a key feature of black aspergilli, alternative approaches for degrading plant biomass, and indications for the genetic basis of stress response. A genome-wide phylogenetic analysis demonstrated in detail the relationship of the newly genome sequenced species with other aspergilli. Conclusions: Many aspects of biological differences between fungal species cannot be explained by current knowledge obtained from genome sequences. The comparative genomics and experimental study, presented here, allows for the first time a genus-wide view of the biological diversity of the aspergilli and in many, but not all, cases linked genome differences to phenotype. Insights gained could be exploited for biotechnological and medical applications of fungi.

349 citations


Journal ArticleDOI
TL;DR: The estimated relative ranking of treatments suggested that priming low-frequency and bilateral rT MS might be the most efficacious and acceptable interventions among all rTMS strategies, and the design of larger RCTs investigating the potential of these approaches in the short-term treatment of MDD.
Abstract: Importance Although several strategies of repetitive transcranial magnetic stimulation (rTMS) have been investigated as treatment of major depressive disorder (MDD), their comparative efficacy and acceptability is unknown. Objective To establish the relative efficacy and acceptability of the different modalities of rTMS used for MDD by performing a network meta-analysis, obtaining a clinically meaningful treatment hierarchy. Data Sources PubMed/MEDLINE, EMBASE, PsycInfo, and Web of Science were searched up until October 1, 2016. Study Selection Randomized clinical trials that compared any rTMS intervention with sham or another rTMS intervention. Trials performing less than 10 sessions were excluded. Data Extraction and Synthesis Two independent reviewers used standard forms for data extraction and quality assessment. Random-effects, standard pairwise, and network meta-analyses were performed to synthesize data. Main Outcomes and Measures Response rates and acceptability (dropout rate). Remission was the secondary outcome. Effect sizes were reported as odds ratios (ORs) with 95% CIs. Results Eighty-one studies (4233 patients, 59.1% women, mean age of 46 years) were included. The interventions more effective than sham were priming low-frequency (OR, 4.66; 95% CI, 1.70-12.77), bilateral (OR, 3.96; 95% CI, 2.37-6.60), high-frequency (OR, 3.07; 95% CI, 2.24-4.21), θ-burst stimulation (OR, 2.54; 95% CI, 1.07-6.05), and low-frequency (OR, 2.37; 95% CI, 1.52-3.68) rTMS. Novel rTMS interventions (accelerated, synchronized, and deep rTMS) were not more effective than sham. Except for θ-burst stimulation vs sham, similar results were obtained for remission. All interventions were at least as acceptable as sham. The estimated relative ranking of treatments suggested that priming low-frequency and bilateral rTMS might be the most efficacious and acceptable interventions among all rTMS strategies. However, results were imprecise and relatively few trials were available for interventions other than low-frequency, high-frequency, and bilateral rTMS. Conclusions and Relevance Few differences were found in clinical efficacy and acceptability between the different rTMS modalities, favoring to some extent bilateral rTMS and priming low-frequency rTMS. These findings warrant the design of larger RCTs investigating the potential of these approaches in the short-term treatment of MDD. Current evidence cannot support novel rTMS interventions as a treatment for MDD. Trial Registration clinicaltrials.gov Identifier:PROSPERO CRD42015019855.

321 citations


Journal ArticleDOI
TL;DR: In this article, a review focused on metal-organic materials as sorbents for ions by surveying MOFs with respect to their exchange/sorption capacities in association with their synthesis and structural characteristics.

Journal ArticleDOI
Vardan Khachatryan1, Albert M. Sirunyan1, Armen Tumasyan1, Wolfgang Adam  +2333 moreInstitutions (195)
TL;DR: In this paper, the authors acknowledge the enduring support for the construction and operation of the LHC and the CMS detector provided by the following funding agencies:======BMWFW and FWF (Austria); FNRS and FWO (Belgium); CNPq, CAPES, FAPERJ,======And FAPESP (Brazil); MES (Bulgaria); CERN; CAS, MoST, and NSFC (China); COLCIENCIAS======(Colombia); MSES and CSF (Croatia); RPF (
Abstract: we acknowledge the enduring support for the construction and operation of the LHC and the CMS detector provided by the following funding agencies: BMWFW and FWF (Austria); FNRS and FWO (Belgium); CNPq, CAPES, FAPERJ, and FAPESP (Brazil); MES (Bulgaria); CERN; CAS, MoST, and NSFC (China); COLCIENCIAS (Colombia); MSES and CSF (Croatia); RPF (Cyprus); SENESCYT (Ecuador); MoER, ERC IUT and ERDF (Estonia); Academy of Finland, MEC, and HIP (Finland); CEA and CNRS/IN2P3 (France); BMBF, DFG, and HGF (Germany); GSRT (Greece); OTKA and NIH (Hungary); DAE and DST (India); IPM (Iran); SFI (Ireland); INFN (Italy); MSIP and NRF (Republic of Korea); LAS (Lithuania); MOE and UM (Malaysia); BUAP, CINVESTAV, CONACYT, LNS, SEP, and UASLP-FAI (Mexico); MBIE (New Zealand); PAEC (Pakistan); MSHE and NSC (Poland); FCT (Portugal); JINR (Dubna); MON, RosAtom, RAS and RFBR (Russia); MESTD (Serbia); SEIDI and CPAN (Spain); Swiss Funding Agencies (Switzerland); MST (Taipei); ThEPCenter, IPST, STAR and NSTDA (Thailand); TUBITAK and TAEK (Turkey); NASU and SFFR (Ukraine); STFC (United Kingdom); DOE and NSF (U.S.A.).

Journal ArticleDOI
Albert M. Sirunyan, Armen Tumasyan, Wolfgang Adam1, Federico Ambrogi1  +2294 moreInstitutions (194)
TL;DR: In this paper, the Higgs boson mass was measured in the H → ZZ → 4l (l = e, μ) decay channel and the signal strength modifiers for individual Higgs production modes were also measured.
Abstract: Properties of the Higgs boson are measured in the H → ZZ → 4l (l = e, μ) decay channel. A data sample of proton-proton collisions at $ \sqrt{s}=13 $ TeV, collected with the CMS detector at the LHC and corresponding to an integrated luminosity of 35.9 fb$^{−1}$ is used. The signal strength modifier μ, defined as the ratio of the observed Higgs boson rate in the H → ZZ → 4l decay channel to the standard model expectation, is measured to be μ = 1.05$_{− 0.17}^{+ 0.19}$ at m$_{H}$ = 125.09 GeV, the combined ATLAS and CMS measurement of the Higgs boson mass. The signal strength modifiers for the individual Higgs boson production modes are also measured. The cross section in the fiducial phase space defined by the requirements on lepton kinematics and event topology is measured to be 2. 92$_{− 0.44}^{+ 0.48}$ (stat)$_{− 0.24}^{+ 0.28}$ (syst)fb, which is compatible with the standard model prediction of 2.76 ± 0.14 fb. Differential cross sections are reported as a function of the transverse momentum of the Higgs boson, the number of associated jets, and the transverse momentum of the leading associated jet. The Higgs boson mass is measured to be m$_{H}$ = 125.26 ± 0.21 GeV and the width is constrained using the on-shell invariant mass distribution to be Γ$_{H}$ < 1.10 GeV, at 95% confidence level.

Journal ArticleDOI
TL;DR: In this article, the second-order and third-order azimuthal anisotropy harmonics of unidentified charged particles, as well as v2v2 of View the MathML sourceKS0 and ViewTheMathML sourceΛ/Λ ǫ particles, are extracted from long-range two-particle correlations as functions of particle multiplicity and transverse momentum.

Journal ArticleDOI
19 May 2017-Allergy
TL;DR: The evidence on the effectiveness, cost‐effectiveness and safety of AIT for allergic asthma is assessed to inform the development of the EAACI Guidelines on Allergen Immunotherapy.
Abstract: Background To inform the development of the European Academy of Allergy and Clinical Immunonology's (EAACI) Guidelines on Allergen Immunotherapy (AIT) for allergic asthma, we assessed the evidence on the effectiveness, cost-effectiveness and safety of AIT Methods We performed a systematic review, which involved searching nine databases Studies were screened against pre-defined eligibility criteria and critically appraised using established instruments Data were synthesized using random-effects meta-analyses Results 98 studies satisfied the inclusion criteria Short-term symptom scores were reduced with a standardized mean difference (SMD) of -111 (95%CI -166, -056) This was robust to a pre-specified sensitivity analyses, but there was evidence suggestive of publication bias Short-term medication scores were reduced SMD -121 (95%CI -187, -054), again with evidence of potential publication bias There was no reduction in short-term combined medication and symptom scores SMD 017 (95%CI -023, 058), but one study showed a beneficial long-term effect For secondary outcomes subcutaneous immunotherapy (SCIT) improved quality of life and decreased allergen specific airways hyperreactivity (AHR) but this was not the case for sub-lingual immunotherapy (SLIT) There were no consistent effects on asthma control, exacerbations, lung function, and non-specific AHR AIT resulted in a modest increased risk of adverse events (AEs) Although relatively uncommon, systemic AEs were more frequent with SCIT; however no fatalities were reported The limited evidence on cost-effectiveness was mainly available for sublingual immunotherapy (SLIT) and this suggested that SLIT is likely to be cost-effective Conclusions AIT can achieve substantial reductions in short-term symptom and medication scores in allergic asthma It was however associated with a modest increased risk of systemic and local AEs More data are needed in relation to secondary outcomes, longer-term effectiveness and cost-effectiveness This article is protected by copyright All rights reserved

Journal ArticleDOI
07 Jun 2017-BMJ
TL;DR: Despite a few hundred systematic reviews, meta-analyses, and Mendelian randomisation studies exploring 136 unique health outcomes, convincing evidence of a clear role of SUA level only exists for gout and nephrolithiasis.
Abstract: Objective To map the diverse health outcomes associated with serum uric acid (SUA) levels. Design Umbrella review. Data sources Medline, Embase, Cochrane Database of Systematic Reviews, and screening of citations and references. Eligibility criteria Systematic reviews and meta-analyses of observational studies that examined associations between SUA level and health outcomes, meta-analyses of randomised controlled trials that investigated health outcomes related to SUA lowering treatment, and Mendelian randomisation studies that explored the causal associations of SUA level with health outcomes. Results 57 articles reporting 15 systematic reviews and144 meta-analyses of observational studies (76 unique outcomes), 8 articles reporting 31 meta-analyses of randomised controlled trials (20 unique outcomes), and 36 articles reporting 107 Mendelian randomisation studies (56 unique outcomes) met the eligibility criteria. Across all three study types, 136 unique health outcomes were reported. 16 unique outcomes in meta-analyses of observational studies had P -6 , 8 unique outcomes in meta-analyses of randomised controlled trials had P Conclusion Despite a few hundred systematic reviews, meta-analyses, and Mendelian randomisation studies exploring 136 unique health outcomes, convincing evidence of a clear role of SUA level only exists for gout and nephrolithiasis.

Journal ArticleDOI
Vardan Khachatryan1, Albert M. Sirunyan1, Armen Tumasyan1, Wolfgang Adam  +2325 moreInstitutions (191)
TL;DR: In this paper, an upper bound on the branching fraction of the Higgs boson decay to invisible particles, as a function of the assumed production cross-sections, was established, and the results were also interpreted in the context of Higgs-portal dark matter models.
Abstract: Searches for invisible decays of the Higgs boson are presented. The data collected with the CMS detector at the LHC correspond to integrated luminosities of 5.1, 19.7, and 2.3 fb−1 at centre-of-mass energies of 7, 8, and 13 TeV, respectively. The search channels target Higgs boson production via gluon fusion, vector boson fusion, and in association with a vector boson. Upper limits are placed on the branching fraction of the Higgs boson decay to invisible particles, as a function of the assumed production cross sections. The combination of all channels, assuming standard model production, yields an observed (expected) upper limit on the invisible branching fraction of 0.24 (0.23) at the 95% confidence level. The results are also interpreted in the context of Higgs-portal dark matter models.

Journal ArticleDOI
TL;DR: Physicians should consider using a PPARgamma agonist, such as pioglitazone, or statin use in those with NAFLD/NASH at high CVD or HCC risk, alone and/or preferably in combination with each other or with ezetimibe, for the primary or secondary prevention of CVD.
Abstract: Non-alcoholic fatty liver disease (NAFLD), the most common liver disease, is characterized by accumulation of fat (>5% of the liver tissue), in the absence of alcohol abuse or other chronic liver diseases. It is closely related to the epidemic of obesity, metabolic syndrome or type 2 diabetes mellitus (T2DM). NAFLD can cause liver inflammation and progress to non-alcoholic steatohepatitis (NASH), fibrosis, cirrhosis or hepatocellular cancer (HCC). Nevertheless, cardiovascular disease (CVD) is the most common cause of death in NAFLD/NASH patients. Current guidelines suggest the use of pioglitazone both in patients with T2DM and in those without. The use of statins, though considered safe by the guidelines, have very limited use; only 10% in high CVD risk patients are on statins by tertiary centers in the US. There are data from several animal studies, 5 post hoc analyses of prospective long-term survival studies, and 5 rather small biopsy proven NASH studies, one at baseline and on at the end of the study. All these studies provide data for biochemical and histological improvement of NAFLD/NASH with statins and in the clinical studies large reductions in CVD events in comparison with those also on statins and normal liver. Ezetimibe was also reported to improve NAFLD. Drugs currently in clinical trials seem to have potential for slowing down the evolution of NAFLD and for reducing liver- and CVD-related morbidity and mortality, but it will take time before they are ready to be used in everyday clinical practice. The suggestion of this Expert Panel is that, pending forthcoming randomized clinical trials, physicians should consider using a PPARgamma agonist, such as pioglitazone, or, statin use in those with NAFLD/NASH at high CVD or HCC risk, alone and/or preferably in combination with each other or with ezetimibe, for the primary or secondary prevention of CVD, and the avoidance of cirrhosis, liver transplantation or HCC, bearing in mind that CVD is the main cause of death in NAFLD/NASH patients.

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TL;DR: Dementia is a heterogeneous neurodegenerative disease, whose etiology results from a complex interplay between environmental and genetic factors.
Abstract: Introduction Dementia is a heterogeneous neurodegenerative disease, whose etiology results from a complex interplay between environmental and genetic factors. Methods We searched PubMed to identify meta-analyses of observational studies that examined associations between nongenetic factors and dementia. We estimated the summary effect size using random-effects and fixed-effects model, the 95% CI, and the 95% prediction interval. We assessed the between-study heterogeneity (I-square), evidence of small-study effects, and excess significance. Results A total of 76 unique associations were examined. By applying standardized criteria, seven associations presented convincing evidence. These associations pertained to benzodiazepines use, depression at any age, late-life depression, and frequency of social contacts for all types of dementia; late-life depression for Alzheimer's disease; and type 2 diabetes mellitus for vascular dementia and Alzheimer's disease. Discussion Several risk factors present substantial evidence for association with dementia and should be assessed as potential targets for interventions, but these associations may not necessarily be causal.

Journal ArticleDOI
TL;DR: Clinical studies have not yielded unequivocal positive outcomes when antioxidants have been administered to hemodialysis patients, likely due to their heterogeneous clinical conditions and underlying risk profile.
Abstract: Hemodialysis (HD) patients are at high risk for all-cause mortality and cardiovascular events. In addition to traditional risk factors, excessive oxidative stress (OS) and chronic inflammation emerge as novel and major contributors to accelerated atherosclerosis and elevated mortality. OS is defined as the imbalance between antioxidant defense mechanisms and oxidant products, the latter overwhelming the former. OS appears in early stages of chronic kidney disease (CKD), advances along with worsening of renal failure, and is further exacerbated by the HD process per se. HD patients manifest excessive OS status due to retention of a plethora of toxins, subsidized under uremia, nutrition lacking antioxidants and turn-over of antioxidants, loss of antioxidants during renal replacement therapy, and leukocyte activation that leads to accumulation of oxidative products. Duration of dialysis therapy, iron infusion, anemia, presence of central venous catheter, and bioincompatible dialyzers are several factors triggering the development of OS. Antioxidant supplementation may take an overall protective role, even at early stages of CKD, to halt the deterioration of kidney function and antagonize systemic inflammation. Unfortunately, clinical studies have not yielded unequivocal positive outcomes when antioxidants have been administered to hemodialysis patients, likely due to their heterogeneous clinical conditions and underlying risk profile.

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TL;DR: In this paper, an updated and extended compilation of growth-rate data based on recent redshift-space distortion measurements is presented, which consists of 34 data points and includes corrections for model dependence.
Abstract: We construct an updated and extended compilation of growth-rate data based on recent redshift-space distortion measurements. The data set consists of 34 data points and includes corrections for model dependence. In order to minimize overlap and maximize the independence of the data points, we also construct a subsample of this compilation (a ``gold'' growth data set) which consists of 18 data points. We test the consistency of this data set with the best-fit $\mathrm{Planck}15/\mathrm{\ensuremath{\Lambda}}\mathrm{CDM}$ parameters in the context of General Relativity using the evolution equation for the growth factor $\ensuremath{\delta}(a)$ with a $w\mathrm{CDM}$ background. We find tension at the $\ensuremath{\sim}3\ensuremath{\sigma}$ level between the best-fit parameters $w$ (the dark energy equation of state), ${\mathrm{\ensuremath{\Omega}}}_{0m}$ (the matter density parameter), and ${\ensuremath{\sigma}}_{8}$ (the matter power spectrum normalization on scales $8{h}^{\ensuremath{-}1}\text{ }\text{ }\mathrm{Mpc}$) and the corresponding $\mathrm{Planck}15/\mathrm{\ensuremath{\Lambda}}\mathrm{CDM}$ parameters ($w=\ensuremath{-}1$, ${\mathrm{\ensuremath{\Omega}}}_{0m}=0.315$, and ${\ensuremath{\sigma}}_{8}=0.831$). We show that the tension disappears if we allow for evolution of the effective Newton constant, parametrized as ${G}_{\mathrm{eff}}(a)/{G}_{\mathrm{N}}=1+{g}_{a}(1\ensuremath{-}a{)}^{n}\ensuremath{-}{g}_{a}(1\ensuremath{-}a{)}^{2n}$ with $n\ensuremath{\ge}2$ where ${g}_{a}$ and $n$ are parameters of the model, $a$ is the scale factor, and $z=1/a\ensuremath{-}1$ is the redshift. This parametrization satisfies three important criteria: a) positive energy of the graviton (${G}_{\mathrm{eff}}g0$), b) consistency with big bang nucleosynthesis constraints (${G}_{\mathrm{eff}}(a\ensuremath{\ll}1)/{G}_{\mathrm{N}}=1$), and c) consistency with Solar System tests (${G}_{\mathrm{eff}}(a=1)/{G}_{\mathrm{N}}=1$ and ${G}_{\mathrm{eff}}^{\ensuremath{'}}(a=1)/{G}_{\mathrm{N}}=0$). We show that the best-fit form of ${G}_{\mathrm{eff}}(z)$ obtained from the growth data corresponds to weakening gravity at recent redshifts (decreasing function of $z$), and we demonstrate that this behavior is not consistent with any scalar-tensor Lagrangian with a real scalar field. Finally, we use MGCAMB to find the best-fit ${G}_{\mathrm{eff}}(z)$ obtained from the Planck cosmic microwave background power spectrum on large angular scales and show that it is a mildly increasing function of $z$, in $3\ensuremath{\sigma}$ tension with the corresponding decreasing best-fit ${G}_{\mathrm{eff}}(z)$ obtained from the growth data.

Journal ArticleDOI
13 Sep 2017-BMJ
TL;DR: The authors describe the key concepts and assumptions of Multivariate and network meta-analysis methods, outline how correlated and indirect evidence arises, and illustrate the contribution of such evidence in real clinical examples involving multiple outcomes and multiple treatments.
Abstract: Organisations such as the National Institute for Health and Care Excellence require the synthesis of evidence from existing studies to inform their decisions—for example, about the best available treatments with respect to multiple efficacy and safety outcomes. However, relevant studies may not provide direct evidence about all the treatments or outcomes of interest. Multivariate and network meta-analysis methods provide a framework to address this, using correlated or indirect evidence from such studies alongside any direct evidence. In this article, the authors describe the key concepts and assumptions of these methods, outline how correlated and indirect evidence arises, and illustrate the contribution of such evidence in real clinical examples involving multiple outcomes and multiple treatments


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TL;DR: An overview of the critical 1H-, 13C- and 31P-NMR parameters for structural and analytical investigations and selected analytical and structural studies with emphasis in the identification of major and minor unsaturated fatty acids in complex lipid extracts without the need for the isolation of the individual components.
Abstract: Mono- and polyunsaturated lipids are widely distributed in Nature, and are structurally and functionally a diverse class of molecules with a variety of physicochemical, biological, medicinal and nutritional properties. High resolution NMR spectroscopic techniques including 1H-, 13C- and 31P-NMR have been successfully employed as a structural and analytical tool for unsaturated lipids. The objective of this review article is to provide: (i) an overview of the critical 1H-, 13C- and 31P-NMR parameters for structural and analytical investigations; (ii) an overview of various 1D and 2D NMR techniques that have been used for resonance assignments; (iii) selected analytical and structural studies with emphasis in the identification of major and minor unsaturated fatty acids in complex lipid extracts without the need for the isolation of the individual components; (iv) selected investigations of oxidation products of lipids; (v) applications in the emerging field of lipidomics; (vi) studies of protein-lipid interactions at a molecular level; (vii) practical considerations and (viii) an overview of future developments in the field.

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Albert M. Sirunyan1, Armen Tumasyan1, Wolfgang Adam, Ece Aşılar  +2238 moreInstitutions (155)
TL;DR: In this article, the authors acknowledge the enduring support for the construction and operation of the LHC and the CMS detector provided by the following funding agencies: BMWFW and FWF (Austria); FNRS and FWO (Belgium); CNPq, CAPES, FAPERJ, and FAPESP (Brazil); MES (Bulgaria); CERN; CAS, MOST, and NSFC (China); COLCIEN-CIAS (Colombia); DAE and DST (India); IPM (Iran);

Journal ArticleDOI
TL;DR: This work presents an uncooled, mid-infrared photodetector, where the pyroelectric response of a LiNbO3 crystal is transduced with high gain into resistivity modulation for graphene, leading to TCRs up to 900% K−1 and the ability to resolve temperature variations down to 15 μK.
Abstract: There is a growing number of applications demanding highly sensitive photodetectors in the mid-infrared. Thermal photodetectors, such as bolometers, have emerged as the technology of choice, because they do not need cooling. The performance of a bolometer is linked to its temperature coefficient of resistance (TCR, ∼2–4% K−1 for state-of-the-art materials). Graphene is ideally suited for optoelectronic applications, with a variety of reported photodetectors ranging from visible to THz frequencies. For the mid-infrared, graphene-based detectors with TCRs ∼4–11% K−1 have been demonstrated. Here we present an uncooled, mid-infrared photodetector, where the pyroelectric response of a LiNbO3 crystal is transduced with high gain (up to 200) into resistivity modulation for graphene. This is achieved by fabricating a floating metallic structure that concentrates the pyroelectric charge on the top-gate capacitor of the graphene channel, leading to TCRs up to 900% K−1, and the ability to resolve temperature variations down to 15 μK. There is emerging interest in photodetectors in the mid-infrared driven by increasing need to monitor the environment for security and healthcare purposes. Sassiet al. show a thermal photodetector, based on the coupling between graphene and a pyroelectric crystal, which shows high temperature sensitivity.

Journal ArticleDOI
TL;DR: The aim of this paper is to present the state-of-the-art of the machine learning methodologies applied for the assessment of heart failure, including models predicting the presence, estimating the subtype, assessing the severity ofHeart failure and predicting the existence of adverse events, such as destabilizations, re-hospitalizations, and mortality.
Abstract: Heart failure is a serious condition with high prevalence (about 2% in the adult population in developed countries, and more than 8% in patients older than 75 years). About 3–5% of hospital admissions are linked with heart failure incidents. Heart failure is the first cause of admission by healthcare professionals in their clinical practice. The costs are very high, reaching up to 2% of the total health costs in the developed countries. Building an effective disease management strategy requires analysis of large amount of data, early detection of the disease, assessment of the severity and early prediction of adverse events. This will inhibit the progression of the disease, will improve the quality of life of the patients and will reduce the associated medical costs. Toward this direction machine learning techniques have been employed. The aim of this paper is to present the state-of-the-art of the machine learning methodologies applied for the assessment of heart failure. More specifically, models predicting the presence, estimating the subtype, assessing the severity of heart failure and predicting the presence of adverse events, such as destabilizations, re-hospitalizations, and mortality are presented. According to the authors' knowledge, it is the first time that such a comprehensive review, focusing on all aspects of the management of heart failure, is presented.

Journal ArticleDOI
01 Oct 2017-Carbon
TL;DR: In this paper, a three-dimensional hybrid foams of SiC nanowires (SiC NWs) coated and bonded with nanostructured lamellar carbon films are synthesized for the first time, by combination of unidirectional freeze drying and carbonization techniques.

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TL;DR: In this paper, high blood pressure (BP) is a major risk factor for cardiovascular diseases (CVDs), the leading cause of mortality worldwide, and both heritable and lifestyle risk factors contribute to elev...
Abstract: Background:High blood pressure (BP) is a major risk factor for cardiovascular diseases (CVDs), the leading cause of mortality worldwide. Both heritable and lifestyle risk factors contribute to elev...

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TL;DR: In this article, a new microporous metal-organic framework (MOF) with an 8-connected net and a bulky functional group was introduced into the terephthalate scaffold prior to the MOF synthesis, referred as MOR-2 (metal organic resin-2).
Abstract: We report a new microporous metal–organic framework (MOF) H16[Zr6O16(H2PATP)4]Cl8·xH2O (H2PATP = 2-((pyridin-1-ium-2-ylmethyl)ammonio)terephthalate), denoted as MOR-2 (metal organic resin-2). MOR-2 represents the first Zr4+-terephthalate MOF with an 8-connected net and also the first example where a bulky functional group was introduced into the terephthalate scaffold prior to the MOF synthesis. MOR-2 shows extraordinary capability to rapidly capture (within 1 min) hexavalent chromium with a sorption capacity up to 194 mg Cr(VI) per g, which far exceeds those reported for the known Cr(VI) sorbents. Moreover, MOR-2 in its composite form with alginic acid (HA) can be utilized in ion exchange columns, which are highly efficient for the removal of Cr(VI) from aqueous solutions including industrial waste samples and also can be regenerated and reused several times with minimal loss (<20%) of their capacity. Besides an excellent sorbent, MOR-2 is also a highly efficient sensor for real time detection of Cr(VI) species as revealed by fluorescence titration experiments in acidic aqueous media. The Cr(VI) detection limits were found as low as 4 ppb, while the system exhibited excellent sensitivity when real world, instead of standard, samples were employed. Thus, the MOR-2 material is a unique example combining both excellent sorption and exceptional luminescence sensing of Cr(VI) species in aqueous solutions.