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Open AccessJournal ArticleDOI

Meta-analysis of genome-wide association studies for body fat distribution in 694 649 individuals of European ancestry

TLDR
A genome‐wide association study meta‐analysis of body fat distribution, measured by waist‐to‐hip ratio (WHR) adjusted for body mass index (WHRadjBMI), and identified 463 signals in 346 loci found heritability and variant effects were generally stronger in women than men, and one‐third of all signals to be sexually dimorphic.
Abstract
More than one in three adults worldwide is either overweight or obese. Epidemiological studies indicate that the location and distribution of excess fat, rather than general adiposity, are more informative for predicting risk of obesity sequelae, including cardiometabolic disease and cancer. We performed a genome-wide association study meta-analysis of body fat distribution, measured by waist-to-hip ratio (WHR) adjusted for body mass index (WHRadjBMI), and identified 463 signals in 346 loci. Heritability and variant effects were generally stronger in women than men, and we found approximately one-third of all signals to be sexually dimorphic. The 5% of individuals carrying the most WHRadjBMI-increasing alleles were 1.62 times more likely than the bottom 5% to have a WHR above the thresholds used for metabolic syndrome. These data, made publicly available, will inform the biology of body fat distribution and its relationship with disease.

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Journal ArticleDOI

Benefits and limitations of genome-wide association studies.

TL;DR: This Review comprehensively assess the benefits and limitations of GWAS in human populations and discusses the relevance of performing more GWAS, with a focus on the cardiometabolic field.
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The impact of sex on gene expression across human tissues

TL;DR: A catalog of sex differences in gene expression and its genetic regulation across 44 human tissue sources surveyed by the GTEx project (v8 data release), analyzing 16,245 RNA-sequencing samples and genotypes of 838 adult individuals is generated.
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The genetics of obesity: from discovery to biology

TL;DR: Loos and Yeo as mentioned in this paper summarized the current understanding of the genetic underpinnings of monogenic and polygenic obesity and highlighted the commonalities revealed by recent studies and discuss the implications for treatment and prediction of obesity risk.
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The role of sex in the genomics of human complex traits

TL;DR: Recent insights into the genetic models and mechanisms that lead to sex differences in complex traits are discussed, including genomic evidence for sex-dependent genetic architecture, models and molecular mechanisms of sexually differentiated phenotypes and implications for health care.
Journal ArticleDOI

Deciphering osteoarthritis genetics across 826,690 individuals from 9 populations

Cindy G. Boer, +62 more
- 02 Sep 2021 - 
TL;DR: A genome-wide association study meta-analysis across 826,690 individuals and identifies 100 independently associated risk variants across 11 osteoarthritis phenotypes, 52 of which have not been associated with the disease before.
References
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Journal ArticleDOI

PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses

TL;DR: This work introduces PLINK, an open-source C/C++ WGAS tool set, and describes the five main domains of function: data management, summary statistics, population stratification, association analysis, and identity-by-descent estimation, which focuses on the estimation and use of identity- by-state and identity/descent information in the context of population-based whole-genome studies.
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A global reference for human genetic variation.

Adam Auton, +517 more
- 01 Oct 2015 - 
TL;DR: The 1000 Genomes Project set out to provide a comprehensive description of common human genetic variation by applying whole-genome sequencing to a diverse set of individuals from multiple populations, and has reconstructed the genomes of 2,504 individuals from 26 populations using a combination of low-coverage whole-generation sequencing, deep exome sequencing, and dense microarray genotyping.
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A Map of Human Genome Variation From Population-Scale Sequencing

TL;DR: The 1000 Genomes Project aims to provide a deep characterization of human genome sequence variation as a foundation for investigating the relationship between genotype and phenotype as mentioned in this paper, and the results of the pilot phase of the project, designed to develop and compare different strategies for genomewide sequencing with high-throughput platforms.
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Second-generation PLINK: rising to the challenge of larger and richer datasets

TL;DR: The second-generation versions of PLINK will offer dramatic improvements in performance and compatibility, and for the first time, users without access to high-end computing resources can perform several essential analyses of the feature-rich and very large genetic datasets coming into use.
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